Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	676,985	Δ10,866 bp	IS5‑mediated	[ybeR]–gltI	[ybeR], djlB, ybeT, ybeU, djlC, hscC, rihA, gltL, gltK, gltJ, sroC, gltI

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	676985	688813–687847	10863–11829	31 [0]	[1] 2	[ybeR]–[insH3]	[ybeR],djlB,ybeT,ybeU,djlC,hscC,rihA,gltL,gltK,gltJ,sroC,gltI,[insH3]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 676984	0 (0.000)	29 (0.920)	27/486	0.3	100%	coding (274/708 nt)	ybeR	DUF1266 domain‑containing protein YbeR
	?	NC_000913	687851 =	NA (NA)					noncoding (1195/1195 nt)	IS5	repeat region

GGATAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGTAACATTTAGTTTG  >  NC_000913/688811‑689064    |                                                                                                                                                                                                                                                           ggATAAGGTCCCCGGCCATTAACAGCCTTGGGGTAAAACGCCTCGATGAATTCCACAACGTTTTGCCCTAGCAGAATCTGCTCTCTGCGGGACAAGAAAATATCTTTTCTGGTCTGACGGCGCTTACTGATGACTTCACTGTCGGCGAAGGTAAGTTGATGACGCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACCTGATCTCATATAAGGGCCTTGTTCGCACCTTCCTTCGGTAACATTTAGt     >  2:318006/1‑251 (MQ=11)    tAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGTAACATTTAGTTTg  >  2:24357/1‑251 (MQ=35)    |                                                                                                                                                                                                                                                           GGATAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGTAACATTTAGTTTG  >  NC_000913/688811‑689064

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑