New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1633132 =	0 (0.000)	21 (0.670)	21/484	0.4	100%	coding (61/234 nt)	ydfK	cold shock protein YdfK
	?	NC_000913	2101749 =	NA (NA)					noncoding (1195/1195 nt)	IS5	repeat region

AAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAAT  >  NC_000913/2101506‑2101958                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                  aaaaaCTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTg                                                                                                                                                                                                            <  2:166959/251‑1 (MQ=255)                   gatgaGCCTAATGTTTCGCATGAAAAGCGGAAACATAATTAAGTCTGACACCAGCCAGTCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAGAGAAACCTTGATCGAAGCCATTTACACCCACCAAATCTGAAACACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATAAGACTAGATACTTTCGTTAGGTATTTTTGTTTTATTAAGGAAGGAGCGAATAAGCGGGGAAAtt                                                                                                                                                                                          >  2:138349/1‑251 (MQ=255)                                                            aGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAg                                                                                                                                                 <  1:253199/251‑1 (MQ=255)                                                                                                tCAATATCTTCACAGTACATAAAGTAACATTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCt                                                                                                             >  1:1521/1‑251 (MQ=255)                                                                                                          cacaGTACATAAAGTAACCTTGATCGAAGTCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTCTCTTTATGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAACGGTGAAATTCGTCTCGGCTGACTCAGTCAGGTCAATTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATTCTGTGAAGCAGTCTATTTAGAcc                                                                                                    <  2:327548/250‑1 (MQ=37)                                                                                                                aCATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAAGCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTAGTTAGACCGTttctt                                                                                             <  1:62683/251‑1 (MQ=255)                                                                                                                    aaaGTAACCTTGATCGAAGCCATTTTCACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCTCTCCAATCATCAACCGTATCAGAATAGATACTGTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCTGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCTATTTTTTCTCCCTTAAATGCCTTGAATCAGCTTATATAGACCGTTTCGTCGcc                                                                                         <  2:278974/251‑1 (MQ=25)                                                                                                                                                                                        cgcACCCATCAACAACAGTATAAGAATACACACTTTCTTTAGGAATTTTTGTTTAATTAAGGAAGGTGCGAATAAGCGGGCAAATTCTTCTCGGCTGTCTCAGTCATTTCCTTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCAAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGACCGCCCGaa                      >  2:317332/1‑250 (MQ=14)                                                                                                                                                                                                 caacaaCCGTCTCAGCATAGATACTTTCTTTAGGCATTTTTGTTTTATTACGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTCGCCCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGc            >  2:286482/1‑251 (MQ=255)                                                                                                                                                                                                           aTCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAAt  >  1:108319/1‑251 (MQ=255)                                                                                                                                                                                                                                aGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTAt                                       <  2:293763/193‑1 (MQ=39)                                                                                                                                                                                                                                aGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCAAGTTTTTAGTGAGATCTCTCCCACTGACGTAt                                       >  1:293763/1‑193 (MQ=255)                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                  AAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAAT  >  NC_000913/2101506‑2101958

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.