| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,743,496 | IS5 (–) +4 bp | coding (40‑43/1374 nt) | mdtK → | multidrug efflux pump MdtK |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1743496 = | 0 (0.000) | 26 (0.830) | 26/486 | 0.3 | 100% | coding (40/1374 nt) | mdtK | multidrug efflux pump MdtK |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1743499 | 0 (0.000) | 18 (0.570) | 16/486 | 0.7 | 100% | coding (43/1374 nt) | mdtK | multidrug efflux pump MdtK |
| ? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
CCTGAAATCAGTTAAGACATTCTGTTCAGCACAATAGCAGGTGGAAAACGCCCTTACCAGTGAAGGGGTAAGAATGGCTATTTTTTCACTGGAGAATTAATAAATCCTCGCTACAATAGACTGAATTTCCCCTGCTTCTTCTTTTTGCTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGCGATCCTCTTTGGTCACGGACTGCTGCTGGCATTAACGCCGGTTATCGCGCAATTAAATGGTTCCGGTCGACGTGAGCGCATTGCGCATCAGGTGCGACAAGGTTTCTGGCTGGCAGGTTT > NC_000913/1743253‑1743746 | ccTGAAATCAGTTAAGACATTCTGTTCAGCACAATAGCAGGTGGAAAACGCCCTTACCAGTGAAGGGGTAAGAATGGCTATTTTTTCACTGGAGAATTAATAAATCCTCGCTACAATAGACTGAATTTCCCCTGCTTCTTCTTTTTGCTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGgga > 1:327310‑M1/1‑247 (MQ=255) tccagcggataagggcgccggccattaccagccttggggtaaaacggctcgatgacttcctccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATc > 2:243179‑M1/242‑250 (MQ=255) ccagcggataaggtcgccggccctttccaaccttggggtaaaacggctcgatgacctcccccatgttttgccatggcagaaacttctccctgcgggacaagaaaatctcctttctggtctgacggcgcctactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATccc > 2:196436‑M1/241‑251 (MQ=255) gataaggtcgccggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGAt > 1:27314‑M1/235‑251 (MQ=255) aaggtcgccggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATtct > 1:283110‑M1/232‑251 (MQ=255) ccattacaagccttggggcacaacggctcgctgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCg < 1:253920‑M1/31‑1 (MQ=255) cagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatcgcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcaggtacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAAc > 2:292691‑M1/214‑251 (MQ=255) ggAAAACGCCCTTACCAGTGAAGGGGTAAGAATGGCTATTTTTTCACTGGAGAATTAATAAATCCTCGCTACAATAGACTGAATTTCCCCTGCTTCTTCTTTTTGCTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtca < 1:32165‑M1/251‑47 (MQ=255) aaacggcatgatgacttccaccatgttttgccattgcagaatctgctccaggcgggacaagaaaatctcttttctggtctgacggctcttactgcagaattcactgtcggcgaaggtaagttgatgactcatgattaaccctgttctatggctccagattacaaacatgatctcatatcatggacttggtcgctcctgccTTAGCAATCCCGGTGATTCTCGTGCAATTCGCACAAACTGCGATGGGtttt > 2:201866‑M1/201‑251 (MQ=255) aCCAGTGAAGGGGTAAGAATGGCTATTTTTTCACTGGAGAATTAATAAATCCTCGCTACAATAGACTGAATTTCCCCTGCTTCTTCTTTTTGCTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttca < 2:95019‑M1/251‑60 (MQ=255) acttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTg < 2:3716‑M1/63‑1 (MQ=255) tttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCt > 1:303694‑M1/175‑250 (MQ=255) tttCACTGGAGAATTAATAAATCCTCGCTACAATAGACTGAATTTCCCCTGCTTCTTCTTTTTGCTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaa < 1:91140‑M1/250‑87 (MQ=255) tgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATgg < 2:179211‑M1/94‑1 (MQ=255) agaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCgg > 2:78451‑M1/142‑251 (MQ=255) aaTAGACTGAATTTCCCCTGCTTCTTCTTTTTGCTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttct > 2:12265‑M1/1‑133 (MQ=255) gcttactgcttaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGCGATCct > 2:281420‑M1/115‑251 (MQ=255) ctgctgaattcactgtcggcgaagttaagttgaagactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttacTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCTACATGGCGGCGGTCGCTATCGGGAATTCTATATGGCTTCCGGCGATCCTCTTTg < 1:270957‑M1/142‑1 (MQ=255) ttttGCTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccag < 1:104951‑M1/248‑144 (MQ=255) ctgcCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattaaaggcgttatccccagtttttagt > 1:240442‑M1/1‑100 (MQ=255) gcCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtg > 2:105945‑M1/1‑98 (MQ=255) ggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGGACTTCTATCTGGCTTCCGGCGATCCTCTTTGGGCACGGTctgctgctg < 2:103545‑M1/159‑1 (MQ=255) gtgcttTTTAGTCTCTCATATAACTACAAATAAAAGGTTTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTTTTATTAGCATTAGggaaggtgcgattaagcggggaaattcttctcggctgactcagtcatttcatttttgcatgttttagccgattttgtcgcccgttaaggcctttaatcagcttatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctcgccca < 2:201881‑M1/249‑165 (MQ=255) gggattgttagtctctCATATAACGACAAATAAAATGTGTTTACGTGCAGAAGTATATCAGTGAAGCGCGGTTGTTATTAGCATTAGgtaaggtgcgaaaaagctgggaaattcttctcggctgactcagtcctttcatttcttcatgtttgagccgattttttctcccgtaaatgtcttgaaccatactatttagaccgtttcctcgtcatttaaggcgttagccccagtttttagtgagatctctacca < 2:201883‑M1/244‑165 (MQ=255) gttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGCGATCCTCTTTGGTCACGGACTGCTGCTGGCATTAACGcc > 2:70299‑M1/82‑251 (MQ=255) atgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGCGATCCTCTTTGGTCACGGACTGCTGCTGGCATTAACGCCGGTTATCGCGCAAt > 1:179211‑M1/68‑251 (MQ=255) tACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctccagtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccg > 1:65852‑M1/1‑63 (MQ=255) atggctccagatgacaaacatgatctcatagcagggacttgttcgctccttccTTAGCAATCCCGGTGATTCGCGCGCAAATCGCCCAAACTGCGATGGGTTTGGTCGATACCGTTATGGCGGGCGGCTATAGTGCCACCGACAGGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGCGATCCTCTTTGGTCACGGACTGCGGCTGGCATTAGCGCCGGTTATCGCGCAAGTAAATGGTTcc > 2:280556‑M1/54‑248 (MQ=255) cagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGCGATCCTCTTTGGTCACGGACTGCTGCTGGCCTTAACGCCGGTTATCGCGCAATTAAATGGTTCCGGTCGACGTg < 1:127567‑M1/205‑1 (MQ=255) atgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGCGATCCTCTTTGGTCACGGACTGCTGCTGGCATTAAAGCCGGGTATCGCGCAATTAAATGGTTCCGGTCGACGTGagg < 1:241865‑M1/208‑2 (MQ=255) aCGTGCAGAAGTATCTCAGTGAAGCGCGTCTGTTATTAGCATTAGggcaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtcaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccaagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgt > 2:141413‑M1/1‑45 (MQ=255) acaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGCGATCCTCTTTGGTCACGGACTGCTGCTGGCATTAACGCCGGTTATCGCGCAATTAAATGGTACCGGTCGACGTGAGCGCa > 2:253920‑M1/41‑251 (MQ=255) caaacatgatctcatatcagggacttgttcgctccttccTTAGCAATCCCCGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCTACATGGCGGCGTTCGCTATCGGTACTTCTATCTGGCTTCCGGCGATCCTCTTTGGTCACGGACGGCTGCTGGCATTAACGCCGGTTATCGCGCAATTAAATGGTTCCGGTCGACGTTAGCGCAt > 2:211830‑M1/40‑251 (MQ=255) cAGAAGAATATAAGTGAAGTGCGTCTGTTATTAGCATTCGggaaggtgcgaataagcggggacattcttctcggctaactcagacatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaatgcgttatccccagcttttagtgagatctctcccactgacgaatcatttggtccgcccgaaacaggttggccagcgtgaat > 2:38291‑M1/1‑40 (MQ=255) ctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGCGATCCTCTTTGGTCACGGACTGCTGCTGGCATTAACGCCGGTTATCGCGCAATTAAATGGTTCCGGTCGACGTGAGCGCATTGCGCATc < 1:76231‑M1/220‑1 (MQ=255) atatCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagctgggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccggttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacggatcatttggtccgcccgatacaggttggccagcgtgaataacatcg < 2:287088‑M1/250‑218 (MQ=255) tatCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactccgtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgccgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgcc > 1:327320‑M1/1‑32 (MQ=255) aagTGAAGCGCGTCTGTTACTAGCATTAGggaaggtgcgaataagcggtgaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgagtttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattgaaggcgttatccccaggttttagtgagatctctcccactgacgtatcatttggtccgccagaaacaggttggccagcgtgaataacatcgccat < 2:101376‑M1/249‑222 (MQ=255) acttgttcgccccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGCGATCCTCTTTGGTCACGGACTGCTGCTGGCATTAACGCCGGTTATCGCGCAATTAAATGGTTCCGGTCGACGTGAGCGCAGTGCGCATCAGGTGCGACAAGGt > 1:258703‑M1/18‑251 (MQ=255) cgTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctccagtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttggttatcgt > 2:324868‑M1/1‑19 (MQ=255) gttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGCGATCCTCTTTGGTCACGGACTGCTGCTGGCATTAACGCCGGTTATCGCGCAATTAAATGGTTCCGGTCGACGTGAGCGCATTGCGCATCAGGTGCGACAAGGTTTct > 1:30612‑M1/14‑251 (MQ=255) gttcgcaccttccGTAGCAATCCCGGTGATTCTCGCGCAAAACGCCCAAACTGCGATGGGTTGTGTCTATACCGTGATGGCGGGCGGCTATAGTGCCACCGCCATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGCGATCCTCTTTGTGCACGGACTGCTGCTGGCATTAACTCCGATTATCGCGCAAGTAAATGGTTCCGGTCGACGTGAGCGCATTGCGCATCAGGTGCGACAAGGTTTc > 2:305734‑M1/14‑250 (MQ=255) tGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttggttatcgttttt > 1:130440‑M1/1‑15 (MQ=255) ccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGCGATCCTCTTTGGTCACGGACTGCTGCTGGCATTAACGCCGGTTATCGCGCAATTAAATGGTTCCGGTCGACGTGAGCGCATTGCGCATCAGGTGCGACAAGGTTTCTGGCTGGCAgg > 2:125378‑M1/3‑250 (MQ=255) ttagcaATCCCGGTGATTCTCGCGCAAATCGCCCAACCTGCGATGGGTTTTGTCGATACCGTGCTGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATAGGTACTTCTATCTGGGTTCCGGCGATACTCTTTGGTCACGGACTGCTGCTGGCATTAACGCCGGTTCTCGCGCAATTAAATGGTTCCGGTCGACGTGAGAGCATTGGGCATCCGGTGCGACAAGGTTTCTTGCTGGCAgggtt > 2:276950/1‑248 (MQ=255) | CCTGAAATCAGTTAAGACATTCTGTTCAGCACAATAGCAGGTGGAAAACGCCCTTACCAGTGAAGGGGTAAGAATGGCTATTTTTTCACTGGAGAATTAATAAATCCTCGCTACAATAGACTGAATTTCCCCTGCTTCTTCTTTTTGCTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGCGATCCTCTTTGGTCACGGACTGCTGCTGGCATTAACGCCGGTTATCGCGCAATTAAATGGTTCCGGTCGACGTGAGCGCATTGCGCATCAGGTGCGACAAGGTTTCTGGCTGGCAGGTTT > NC_000913/1743253‑1743746 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |