mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.39.0
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,520,979 | 0 | G | T | 50.0% | ‑3.2 / 17.4 | 18 | noncoding (49/76 nt) | valU | tRNA‑Val |
| * | NC_000913 | 3,778,569 | 0 | C | A | 32.6% | 49.4 / 30.9 | 43 | P391T (CCG→ACG) | lldP | lactate/glycolate:H(+) symporter LldP |
| * | NC_000913 | 3,476,179 | 0 | C | T | 30.4% | 25.4 / 17.8 | 25 | D88N (GAT→AAT) | yheO | DNA‑binding transcriptional regulator YheO |
| * | NC_000913 | 90,908 | 0 | A | T | 30.3% | 54.1 / 22.7 | 34 | Q272L (CAG→CTG) | rsmH | 16S rRNA m(4)C1402 methyltransferase |
| * | NC_000913 | 228,689 | 0 | T | . | 20.4% | 83.8 / 28.6 | 44 | intergenic (+27/‑67) | rrlH/rrfH | 23S ribosomal RNA/5S ribosomal RNA |