| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,492,211 | IS150 (–) +3 bp | intergenic (+36/‑257) | sokB → / → trg | putative small regulatory RNA antitoxin SokB/methyl‑accepting chemotaxis protein Trg |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1492211 = | 0 (0.000) | 11 (0.370) | 11/486 | 1.1 | 100% | intergenic (+36/‑259) | sokB/trg | putative small regulatory RNA antitoxin SokB/methyl‑accepting chemotaxis protein Trg |
| ? | NC_000913 | 3720633 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
| * | ? | NC_000913 | = 1492213 | 0 (0.000) | 18 (0.590) | 18/490 | 0.6 | 100% | intergenic (+38/‑257) | sokB/trg | putative small regulatory RNA antitoxin SokB/methyl‑accepting chemotaxis protein Trg |
| ? | NC_000913 | = 3722075 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
GGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTAAAAAAATCTCATAAAATTAATATATGAGATAATCTTTATTCAGCAGAAGATTATTAAAGGTTGCTGTATTATTTAGCGATAAAAAAAGCCTGCCAGATGGCAGGCTATTTAATAACG > NC_000913/3721840‑3722321 | ggCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCGTAAAGTCGGAGTGTTTTTATCGTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAACAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATAGCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATGTATAg < 1:276811/251‑1 (MQ=255) aTTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTc > 1:58860/1‑249 (MQ=255) tGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCACCTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAggg > 2:231244/1‑250 (MQ=255) gTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGt < 1:111955/250‑1 (MQ=255) ggATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGc < 2:243823/251‑1 (MQ=255) ggAGTGTGTCTGTGGAACCTGAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTTTATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGc < 2:2766/250‑1 (MQ=255) gtTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAgcctgagactttctgttttcaggctaaccgggaatcagaaagacg > 1:46205‑M2/1‑205 (MQ=255) gtTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTc < 1:127329/250‑1 (MQ=255) tAAAGTCGGAGTGTTTTTATCTTGATGAGTGCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAgcctgagactttctgttttcatgctaaccgggaatcagaaagacgaagcccccgaccgat > 2:129885‑M2/1‑190 (MQ=255) gAGTGTATTTATCTGGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATAGTGAATACTACAACAGCAGAAGAATTTGCCTGAAATTAAAAGGTCTGACTCCAAATGAATATCGTAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAgcctgagactttctgttttcaggctaaccgggaatcataaagccgaaggccccgaccgatatttctatc > 2:209877‑M2/1‑182 (MQ=255) gtgtTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGtctt > 2:254881/1‑250 (MQ=255) ttGATGAGTACAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTATCCTGAAATTAAAAGTTCTGTCTCCAATGGAATATCGGAATCAGTCCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAgcctgagactttctgttttcaggctaaccgggaatcagaaagacgaaggccccgatcgatattcctatcaaccgaggccaa > 2:71708‑M2/1‑169 (MQ=255) tgatgaGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGAGTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACATTCTCAAGCACCCGTg < 1:259125/250‑1 (MQ=255) ttCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAgcc < 1:227439‑M2/164‑4 (MQ=255) ttCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAgcc > 2:227439‑M2/1‑161 (MQ=255) aaGGATGATGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCATGAAATTAAAAGGTCTGACTACAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTttctt > 2:113687/1‑251 (MQ=255) aTGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAAGTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTcc < 1:180851/251‑1 (MQ=255) actacAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAgcctgagactttctgttttcaggctaaccgggaatcagaaagacgaaggccccgaccgatatttctatcaaccgaggccaacgaatgaacctagcaattcagatcttagcct > 1:223547‑M2/1‑112 (MQ=255) actacAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAgcctgagactttctgttttcaggctaaccgggaatcagaaagacgaaggccccgaccgatatttctatcaaccgaggccaacgaatgaacctagcaattcagatcttagcct < 2:223547‑M2/224‑113 (MQ=255) aaacagCAGAAGAATTAGCATGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACTTAGATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAgcctgagactttctgttttcaggctaaccgggaatcagaaagacgaaggccccgaccgatatttctatcaaccgaggccaacgaatgaacctagcaattcagatcttagcctcttacccgccatccggcaaggagaaaggcta > 2:99389‑M2/2‑108 (MQ=255) aagaaTTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAgcctgagactttctgttttcaggctaaccgggaatcagaaagacgaaggccccgaccgatatttctatcaaccgaggccaacgaatgaacctagcaattcagatcttagcctcttacccgccatccggcaaggagaaaggctatgaagcac < 2:166265‑M2/250‑152 (MQ=255) aTTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCCTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGCTATAATCCTAAAAAAATCTCATAAAATTAATATATg > 1:149453/1‑250 (MQ=255) gAAATTAAAAGGTCTGACTCCAATTTAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAgcctgagactttctgttttcaggctaaccgggaatcagaaagacgaaggccccgaccgatatttctatcaaccgaggccaacgaatgaacctagcaattcagatcttagcctcttacccgccatccggcaaggagaaaggctatgaagcacaaccctctggt > 2:236274‑M2/1‑87 (MQ=255) aaTTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTAAAAAAATCTCATAAAATTAATATATGAGATAATCttt > 1:101836/1‑251 (MQ=255) aaaGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTAAAAAAATCTCATAAAATTAATATATGAGATAATCTTTATTc > 1:15630/1‑250 (MQ=255) aTTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTAAAAAAATCTCATAAAATTAATATATGAGATAATCTTTATTCAGCAGAAGATTATTaa < 1:186325/251‑1 (MQ=255) atCGGAATCCGACCTATATGCCTCGTGATTAACTGTCCAACTTTTTGGGGTCAGTACACACTTTGATTTATAGTCAGGTAGGGCTTTTCTCTGTCTGCCTTTAGGTGAATACCTGAGACAAACAGTCTCAAGCACACGTGGCTATTCTAGCTTAATAAGTTTGATTCTTCTCCTTGATATAATCCTAAAAAAATCTCATAACATTAATATATGAGATAATCTTTATTCAGCCGAAGATTATTAAAGGTTGc > 2:279870/1‑251 (MQ=255) gAATCAGACCTATATGCTTCGTGTTTAACTGTCCAACTTTTTTGGGTCAGTACAATCTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTTTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTGTGTTTCTTCTCCTTGATATAATCCTAAAAAAATCTCATAAAATTAATATATGAGATAATCTTTATTCAGCAGAAGATTATTAAAGGTTGCTGta < 2:213751/251‑1 (MQ=255) cTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAgcctgagactttctgttttcaggctaaccgggaatcagaaagacgaaggccccgaccgatatttctatcaaccgaggccaacgaatgaacctagcaattcagatcttagcctcttacccgccatccggcaaggagaaaggctatgaagcacaaccctctggtggtgtgtctgctcattatctgcattacgattctgacattcacac < 1:238578‑M2/251‑207 (MQ=255) tCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAgcctgagactttctgttttcaggctaaccgggaatcagaaagacgaaggccccgaccgatatttctatcaaccgaggccaacgaatgaacctagcaattcagatcttagcctcttacccgccatccggcaaggagaaaggctatgaagcacaaccctctggtggtgtgtctgctcattatctgcattacgattctgacattcacactcctgaccc < 2:4948‑M2/251‑216 (MQ=255) ttAACTGTCCAACTTTTTGGGGTCAGTACAgcctgagactttctgttttcaggctaaccgggaatcagaaagacgaaggccccgaccgatatttctatcaaccgaggccaacgaatgaacctagcaattcagatcttagcctcttacccgccatccggcaaggagaaaggctatgtagcacaatcctcttgtggtgtgtctgctcattatctgcattacgattctgacattcacactcctgaccagacaa > 2:276807‑M2/1‑30 (MQ=255) gTCCAACTTTTTGGGGTCAGTACAgcctgagacttttggttttcaggctaaccgggaatcagaaagacgaaggccccgaccgatatttctatcaaccgaggccaacgaatgaacctagcaatgcagatcttagcctctttcccgccatccggcaaggagaaagtctatgaagcacaaccctctggttgtgtgtctgctcattagctgcattacgattctgacattcacactcctgacccgacaaacgctc > 2:168630‑M2/1‑24 (MQ=255) ccAACTTTTTGGGGTCAGTACAgcctgagactttctgttttcaggctaaccgggaatcagaaagacgaaggccccgaccgatatttctatcaaccgaggccaacgaatgaacctagcaattcagatcttagcctcttacccgccatccggcaaggagaaaggctatgaagcacaaccctctggtggtgtgtctgctcattatctgcattacgattctgacattcacactcctgacccgacaaacgctctac < 2:60828‑M2/251‑230 (MQ=255) ttttGGGGTTAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTAAAAAAATCTCATAAAATTAATATATGAGATAATCTTTATTCAGCAGAAGATTATTAAAGGTTGCTGTATTATTTATCGATAAAAAAAGCCTGCCAGATGGCAGGc < 1:171034/250‑1 (MQ=255) gggTCAGTACAgcctgagactttctgttttcaggctaaccgggaatcagaaagacgaaggccccgaccgatatttctatcaaccgaggccaacgaatgaacctagcaattcagatcttagcctcttacccgccatccggcaaggagaaaggctatgaagcacaaccctctggtggtgtgtctgctcattatctgcattacgattctgacattcacactcctgacccgacaaacgctctacgaactgcggtt > 2:238578‑M2/1‑11 (MQ=255) gTACAgcctgagactttctgttttcaggctaaccgggaatcagaaagacgaaggccccgaccgatatttctatcaaccgaggccaacgaatgaacctagcaattcagatcttagcctcttacccgccatccggcaaggagaaaggctatgaagcacaaccctctggtggtgtgtctgctcattatctgcattacgattctgacattcacactcctgacccgacaaacgctctacgaactgcggttccggtc < 2:87012‑M2/251‑247 (MQ=255) gTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCCTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTAAAAAAATCTCATAAAATTAATATATGAGATAATCTTTATTCAGCAGAAGATTATTAAAGGTTGCTGTATTATTTAGCGATAAAAAAAGCCTGCCAGATGGCAGGCTATTTAATAACg < 2:149453/251‑1 (MQ=255) | GGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTAAAAAAATCTCATAAAATTAATATATGAGATAATCTTTATTCAGCAGAAGATTATTAAAGGTTGCTGTATTATTTAGCGATAAAAAAAGCCTGCCAGATGGCAGGCTATTTAATAACG > NC_000913/3721840‑3722321 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |