| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,492,211 | IS150 (–) +3 bp | intergenic (+36/‑257) | sokB → / → trg | putative small regulatory RNA antitoxin SokB/methyl‑accepting chemotaxis protein Trg |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1492211 = | 0 (0.000) | 11 (0.370) | 11/486 | 1.1 | 100% | intergenic (+36/‑259) | sokB/trg | putative small regulatory RNA antitoxin SokB/methyl‑accepting chemotaxis protein Trg |
| ? | NC_000913 | 3720633 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
| * | ? | NC_000913 | = 1492213 | 0 (0.000) | 18 (0.590) | 18/490 | 0.6 | 100% | intergenic (+38/‑257) | sokB/trg | putative small regulatory RNA antitoxin SokB/methyl‑accepting chemotaxis protein Trg |
| ? | NC_000913 | = 3722075 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
TCACCGTCCCGGAACCGCAGTTCGTAGAGCGTTTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGGGTTGTGCTTCATAGCCTTTCTCCTTGCCGGATGGCGGGTAAGAGGCTAAGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGAATTTTTCGTCATTCGGGTTAGCCAGTTTAGCCATTCGTTACTCTCTTCATTCCAATAGCATTAATTTTCTATGCAATAATTGTTGTAAAAATGTGACGCAAAGAGGTTTTTGGTCATAAGTAATTACCGTC > NC_000913/1491962‑1492418 | ccACCGTCTCGGAACCGCAGTGCGTATAGCGTTTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGGGTTGTGCTTCATAGCCTTTCTCCTTGCCGGATGGCGGGTAAGAGGCTAAGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGCTTCCCGGTTAGCCTGAAAACAGAAAGTTTCAgg < 2:162268/250‑1 (MQ=255) gcaactctggatcagctctaacgcctttaggtttgggaattaaacctttttctccatgtttttcatagagggcaacccatgtcctgacctgggttcgtgggacaccaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgctttgcaaaagggtattttggcttgacatattaggggctattccatttcatcgtcctacaaaatgggtgcagtacaGGc > 2:282984‑M1/249‑251 (MQ=255) gaccggAACCGCAGTTCGTAGAGCGTTTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGGGTTGTGCTTCATAGCCTTTCTCCTTGCCGGATGGCGGGTAAGAGGCTAAGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgtac < 2:87012‑M1/249‑6 (MQ=255) tcagcactaacgcctttaggtttgggaattaaacctttttctccatgtttttcatagagggcaacccatgtcctgacctgggttcgggggacaccaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGGCACCCGCAGGc < 2:213804‑M1/13‑1 (MQ=255) aaCCGCAGTTCGTAGAGCGTTTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGGGTTGTGCTTCATAGCCTTTCTCCTTGCCGGATGGCGGGTAAGAGGCTAAGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgtactgaccc > 2:238578‑M1/1‑240 (MQ=255) gTAGAGCGTTTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGGGTTGTGCTTCATAGCCTTTCTCCTTGCCGGATGGCGGGTAAGAGGCTAAGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgtactgaccccaaaaagttgg < 2:60828‑M1/251‑23 (MQ=255) gagCGTTTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGCTAATGAGCAGACACACAACCAGAGGGTTGTGCTTCATAGACTTTCTCCTTGCCGGATGGCGGGAAAGAGGCTAAGATCTGCATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACCAAAAGTCTCAGGCtgtactgaccccaaaaagttggac > 2:168630‑M1/1‑226 (MQ=255) ttGTCTGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACAAGAGGATTGTGCTACATAGCCTTTCTCCTTGCCGGATGGCGGGTAAGAGGCTAAGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgtactgaccccaaaaagttggacagttaa > 2:276807‑M1/1‑220 (MQ=255) gggTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGGGTTGTGCTTCATAGCCTTTCTCCTTGCCGGATGGCGGGTAAGAGGCTAAGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgtactgaccccaaaaagttggacagttaaacacga < 2:4948‑M1/251‑37 (MQ=255) aacctttttctccatgtttttcatagagggcaacccatgtcctgacctgggttcgggggacaccaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggaattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGTgacgacaat < 2:67615‑M1/43‑5 (MQ=255) gtgtGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGGGTTGTGCTTCATAGCCTTTCTCCTTGCCGGATGGCGGGTAAGAGGCTAAGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgtactgaccccaaaaagttggacagttaaacacgaggcatatag < 1:238578‑M1/251‑46 (MQ=255) gcctgacctgggttcgggggacaccaaaacgtgtcgagatgatcctgtacccatcatcagttgtgaagtagtgattcacgacttcacggtgctgttcaaaagggtattttggctttgacattttaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGGCACCCGCAGGCATCTGATGAGGTTTCCTTAGGTATGAAAATATCCACTTCTCGAAATTGTGTTCTGTTTTCCAGAAttttt > 2:213421‑M1/169‑251 (MQ=255) accaGAGGGTTGTGCTTCATAGCCTTTCTCCTTGCCGGATGGCGGGTAAGAGGCTAAGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattaaattggagtcagaccttttaatttc > 2:236274‑M1/1‑162 (MQ=255) gtgCTTCATAGCCTTTCTCCTTGCCGGATGGCGGGTAAGAGGCTAAGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattctt < 2:166265‑M1/250‑100 (MQ=255) ccaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGAATTTTTCGTCATTCGGGTTAGCCAGTTTa > 2:255635‑M1/146‑251 (MQ=255) tAGCCTTTCTCCTTGCCGGATGGCGGGTAAGAGGCTAAGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgtactgaccccaaaaagttggacagttaaacacgaggcatctaagtctgattccgatattcaattggagtcagaccttttaatttcatgctaattcttctgctgttt > 2:99389‑M1/1‑143 (MQ=255) gtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGAATTTTTCGTCATTCGGGTTAGCCAGTTTAGCCATTc < 2:213965‑M1/113‑1 (MQ=255) ccgagaggatcctgtaaccatcaacagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGAATTTTTCGTCATTCGGGTTAGCCATTTTAGCCATTCGtt > 2:73753‑M1/136‑251 (MQ=255) agatgatcctgtaaccatcatccgttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGAATTTTTCGTCATTCGGGTTAGCCAGTTTAGCCATTCGTTAct < 1:201627‑M1/119‑1 (MQ=255) agGCTAAGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagt < 2:223547‑M1/224‑113 (MQ=255) agGCTAAGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagt > 1:223547‑M1/1‑112 (MQ=255) gtgaaggagtgattcacgtcttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGAATTTTTCGTCATTCGGGTTAGCCAGTTTAGCCATTCGTTACTCTCTTCATTCCAATAGCATTAAttt > 2:238175‑M1/107‑250 (MQ=255) gattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGAATTTTTCGTCATTCGGGTTAGCCAGTTTAGCCATTCGTTACGCTCTTCATTCCAATAGCATTAATTTTCTATGCaat > 1:104279‑M1/97‑250 (MQ=255) ttGGCCTCGGTTGATAGGAATATCGATCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggactgattccgatattccattggagacagaacttttaatttcaggataattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgtactcatcaa > 2:71708‑M1/1‑81 (MQ=255) gATAGAAATATCGGTCGGGGCCTTCGGCTTTATGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattacgatattcatttggagtcagaccttttaatttcaggcaaattcttctgctgttgtagtattcactatattccgtaacagcatccttcagttcgcttatattactgaactcatccagataaatacactc > 2:209877‑M1/1‑69 (MQ=255) gtattttggcttggacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGAATTTTTCGTCATTCGGGTTAGCCAGTTTAGCCATTCGTTACTCTCTTCATTCCAATAGCATTAATTTTCTATGCAATAATTGTTGTAAAAATGTGACGCAAAGAGGttt > 2:91247‑M1/66‑251 (MQ=255) atCGGTCGGGGGCTTCGTCTTTCTGATTCCCGGTTAGCATGAAAACAGAAAGTCTCAGGCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgcactcatcaagataaaaacactccgacttta > 2:129885‑M1/1‑60 (MQ=255) cGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgactttaaggttccaaagaaac > 1:46205‑M1/1‑45 (MQ=255) ggCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaa > 2:227439‑M1/1‑3 (MQ=255) ggCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaa < 1:227439‑M1/164‑162 (MQ=255) | TCACCGTCCCGGAACCGCAGTTCGTAGAGCGTTTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGGGTTGTGCTTCATAGCCTTTCTCCTTGCCGGATGGCGGGTAAGAGGCTAAGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGAATTTTTCGTCATTCGGGTTAGCCAGTTTAGCCATTCGTTACTCTCTTCATTCCAATAGCATTAATTTTCTATGCAATAATTGTTGTAAAAATGTGACGCAAAGAGGTTTTTGGTCATAAGTAATTACCGTC > NC_000913/1491962‑1492418 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |