| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 168704 = | 0 (0.000) | 34 (1.390) | 31/476 | 0.1 | 100% | coding (1221/2244 nt) | fhuA | ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 182989 = | 0 (0.000) | coding (527/1158 nt) | cdaR | DNA‑binding transcriptional activator CdaR | |||||
TGACAGGTGAACCAGAGAATCTGCGTAAATATGGCGAACTGGTCTGCATGACGGCTGAAATGATGCTGGAACAGTCGCGGTTGATGCACTTGTTGGCGCAGGATAGCCGTTTGCGGGAAGAACTGGTGATGAACCTGATTCAGGCAGAGGAGAATACTCCCGCACTTACTGAATGGGCGCAACGGCTGGGGATCGATCTCAATCAACCGCGAGTGGTGGCTATTGTTGAGGTCGACAGCGGTCAGCTTGGCGTGGACAGCGCAATGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGTAATAATCTGGTGGCGATTGTCTCGCTAACCGAAATGGTGGTGTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCG > NC_000913/182743‑183228 | gcccagtcataacgaccgcctagggtgaccagcactttatcccactgcgcctgatcctgaacataaacgcccgtttgtttctgtttattcagaatgcggtaagggccggagtttgccggatctttggcattgaagtcgaaatcggtattcaccggattgtacagattgagcagtggcacagagtcgtcgtaaccaaaccaggcgttgatgtcattacgcatacgcataaagtcgacaccggtcagct < 1:86601‑M2/1‑1 (MQ=255) ccagtcataacgaccgcctagggtgaccagcactttatcccactgcgcctgatcctgaacataaacgcccgtttgtttctgtttattcagaatgcggtaagggccggagtttgccggatctttggcattgaagtcgaaatcggtattcaccggattgtacagattgagcagtggcacagagtcgtcgtaaccaaaccaggcgttgatgtcattacgcatacgcataaagtcgacaccggtcagcTTGGCGt < 2:56222‑M2/7‑1 (MQ=255) ataacgaccgcctagggtgaccagcactttatcccactgcgcctgatcctgaacataaacgcccgtttgtttctgtttattcagaatgcggtaagggccggagtttgccggatctttggcattgaaggcgaaatcggtattcaccggattgtacagattgagcagtggcacagaggctgcgtaaccaaaccaggcgttgatgtcattacgcatacgcataaagtcgacaccggtcagcTTGGCGTGGACAg < 1:16783‑M2/13‑1 (MQ=255) gcctagggtgaccagcactttatcccactgcgcctgatcctgaacataaacgcccgtttgtttctgtttattcagaatgcggtaagggccggagtttgccggatctttggcattgaagtcgaaatcggtattcaccggattgtacagattgagcagtggcacagagtcgtcgtaaccaaaccaggcgttgatgtcattacgcatacgcataaagtcgacaccggtcagcTTGGCGTGGACAGCGCAATGGc < 1:61625‑M2/22‑1 (MQ=255) agggtgaccagcactttatcccactgcgcctggtcctgaacataaccgcccgtttgtttctgtttattcagagtgcggtaagggcgggggtttgccggatctttggcattgtcttcgaaatcggtattcaccggattgtacagattgcgcagaggcacagagtcgtcgtaaccaaaccaggcgatgatgtcattacgcatacgcataacgtcgacaccggtcagcTTGGCGTGGACAGCGCAATGGCgg > 1:133265‑M2/226‑249 (MQ=255) ggggaccagcactttatcccactgcgcctgatcctgaacctaaacgcccgtttgtttctgtttattcagaatgcggtaagggccggagtttgccggatctttggcattgaagtcgaaatcggtattcaccggattgtacagattgagcagtggcacagagtcgtcgtaaccaaaccaggcgttgatgtcattacgcatacgcataaagtcgacaccggtcagcTTGGCGTGGACAGCGCAATGGCGGCGtt > 2:136952‑M2/224‑251 (MQ=255) ttatccaaatgcgcctgatcctgaacataaacgaccgtgtgtttctggttattcagaatgctgtaagggccgtagtttgccggatctttggcattgaagtcgaaatcggtattcaccggattgttcagatttagcagtggcacagagtcgtcgtaaccaaaccaggcgttgatgtcattacgcatacgcagaaagtcgacaccggtcagcTGGGCGTGGACAGCGCAATGTCGGAGTTACAACAACTGCa < 2:146193‑M2/40‑1 (MQ=255) gaacataaacgcccgtttgtttctgtttattcagaatgcggtaagggccggagtttgccggatctttggcattgaagtcgaaatcggtattcaccggattgtacagattgagcagtggcacagagtcgtcgtaaccaaaccaggcgttgatgtcattacgcatacgcataaagtcgacaccggtcagcTTGGCGTGGACAGCGCAATGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGc > 1:5662‑M2/189‑251 (MQ=255) acataaacgcccgtttgtttctgtttattcagaatgcggtaagggccggagtttgccggatctttggcattgaagtcgaaatcggtattcaccggattgtacagattgagcagtggcacagagtcgtcgtaaccaaaccaggcgttgatgtcattacgcatacgcataaagtcgacaccggtcagcTTGGCGTGGACAGCGCAATGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGt > 2:96302‑M2/187‑251 (MQ=255) gtttgtttctgtttattcagaatgcggtaagggccggagtttgccggatctgtggcagtgaagtcgaaatcggtattcaccggattgtacagattgagcagtggcacagagtcgtcgtaaccaaaccaggcgttgatgtcattacgcatacgcataaagtcgacaccggtcagcTTGGCGTGGACAGCGCAATGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGTAATAATCtggtg < 2:66717‑M2/77‑1 (MQ=255) tttattcagaatgcggtaagggccggagtttgccggatctttggcattgaagtcgaaatcggtattcaccggattgtacagattgagcagtggcacagagtcgtcgtaaccaaaccaggcgttgatgtcattacgcatacgcataaagtcgacaccggtcagcTTGGCGTGGACAGCGCAATGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGTAATAATCTGGTGGCGATTGtctc > 1:65531‑M2/164‑251 (MQ=255) agaatgcggtaagggccggagtttgccggatctttggcattgaagtcgaaatcggtattcaccggattgtacagattgagcagtggcacagagtcgtcgtaaccaaaccaggcgttgatgtcattacgcatacgcataaagtcgacaccggtcagcTTGGCGTGGACAGCGCAATGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGTAATAATCTGGTGGCGATTGTCTCGCTAAcc > 1:88552‑M2/157‑251 (MQ=255) gaatgcggtaagggccggagtttgccggatctttggcattgaagtcgaaatcggtattcaccggattgtacagattgagcagtggcacagagtcgtcgtaaccaaaccaggcgttgatgtcattacgcatacgcataaagtcgacaccggtcagcTTGGCGTGGACAGCGCAATGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGTAATAATCTGGTGGCGATTGTCTCGCTAACCg > 1:132059‑M2/156‑251 (MQ=255) aatgcggtaagggccggagtttgccggatctttggcattgaagtcgaaatcggtattcaccggattgtacagattgagcagtggcacagagtcgtcgtaaccaaaccaggcgttgatgtcattacgcatacgcataaagtcgacaccggtcagcTTGGCGTGGACAGCGCAATGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGTAATAATCTGGTGGCGATTGTCTCGCTAACCg > 1:137454‑M2/155‑250 (MQ=255) cggagtttgccggatctttggcattgaagtcgaaatcggtattcaccggattgtacagattgagcagtggcacagagtcgtcgtaaccaaaccaggcgttgatgtcattacgcatacgcataaagtcgacaccggtcagcTTGGCGTGGACAGCGCAATGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGTAATAATCTGGTGGCGATTGTCTCGCTAACCGAAATGGTGGTGTTGa < 1:229778‑M2/111‑1 (MQ=255) gagtttgccggatctttggcattgaagtcgaaatcggtattcaccggattgtacagattgagcagtggcacagagtcgtcgtaaccaaaccaggcgttgatgtcattacgcatacgcataaagtcgacaccggtcagcTTGGCGTGGACAGCGCAATGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGTAATAATCTGGTGGCGATTGTCTCGCTAACCGAAATGGTGGTGTTGaaa < 1:225032‑M2/113‑1 (MQ=255) ttggcattgaagtcgaaatcggtattcaccggattgtacagattgagcagtggcacagagtcgtcgtaaccaaaccaggcgttgatgtcattacgcatacgcataaagtcgacaccggtcagcTTGGCGTGGACAGCGCAAGGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGTAATAATCTGGTGGCGATTGTCTCGCTAACCGAAATGGTGGTGTTGAAACCGGCGTTGa < 1:136952‑M2/123‑1 (MQ=255) ttgaagtcgaaatcggtattcaccggattgtacagattgagcagtggcacagagtcgtcgtaaccaaaccaggcgttgatgtcattacgcatacgcataaagtcgacaccggtcagcTTGGCGTGGACAGCGCAATGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGTAATAATCTGGTGGCGATTGTCTCGCTAACCGAAATGGTGGTGTTGAAACCGGCGTTGAACTCTTTTggg > 1:245451‑M2/118‑251 (MQ=255) gaagtcgaaatcggtattcaccggattgtacagattgagcagtggcacagaggcgtcgtaaccaaaccaggcgttgatgtcattacgcatacgcataaagacgaaaccggtcagcTTGGAGTGGACAGCGCAATGGCGGAGGTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGTAATAATCTGGGGGCGATTGTCTCGCGAACCGAAATGGTGGGGTTGAAAGCGGCGTTGAACTCTTTTGGgcg > 1:1224‑M2/116‑251 (MQ=255) aagtcgaaatcggtattcaccggattgtacagattgagcagtggcacagagtcgtcgtaaccaaaccaggcgttgatgtcattacgcatacgcataaagtcgacaccggtcagcTTGGCGTGGACAGCGCAATGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGTAATAATCTGGTGGCGATTGTCTCGCTAACCGAAATGGTGGTGTTGAAACCGGCGTTGAACTCTTTTGGgcgc > 1:88517‑M2/115‑251 (MQ=255) aaatcggtaatcaccggattgtgcagattgagcagtggcacagaatcgtcgtaaccaaaccaggcgatgatgtcattacgcatacgcataaagtcgacaccggtcagcTTGGCGTGGACAGCGCAATGGCGGAGTTACAAAAACTGCAAAACGCGCTGACTACGCCCGAGCGTAATAATCTGGTGGCGATTGTCTCGCTAACCGAAATGGTGGTGTTGAAACCGGCGTTGCACTCTTTTGGGCGCTGGGAt > 2:52427‑M2/109‑251 (MQ=255) gtattcaccggattgtacagattgagcagaggcacagagtcgtcgtaaccaaaccaggcgttgatgtcattacgcatacgcataacgtcgacaccggtcagcTTGGCGTGGACAGCGCAATGGCGGCGTTACAACCACTGCAAAACGCGCt > 2:36898‑M2/103‑151 (MQ=255) ggattgtacagattgagcagtggcacagagtcgtcgtaaccaaaccaggcgttgatgtcattacgcatacgcataaagtcgacaccggtcagcTTGGCGTGGACAGCGCAATGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGTAATAATCTGGTGGCGATTGTCTCGCTAACCGAAATGGTGGTGTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGt < 1:29746‑M2/158‑1 (MQ=255) tgagcagtggcacagagtcgtcgtaaccaaaccaggcgttgatgtcattacgcatacgcataaagtcgacaccggtcagcTTGGCGTGGACAGCGCAATGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGTAATAATCTGGTGGCGATTGTCTCGCTAACCGAAATGGTGGTGTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGaa < 1:93303‑M2/170‑1 (MQ=255) ggcacagagtcgtcgtaaccaaaccaggcgttgatgtcattacgcatacgcataaagtcgacaccggtcagcTTGGCGTGGACAGCGCAATGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGACATAATCTGGTGGCGATTGTCTCGCTAACCGAAATGGTGGTGTTGAAACCGGCGTTGAACTCTTTTGGGAGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGAtt > 2:142754‑M2/73‑251 (MQ=255) ggcacagagccgtcgtaaacaaaccaggcgttgatgtcattacgcatacgcataaagtcgacaccggtcagcTTGGCGTGGCCAGCGCAATGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGTAATAATCTGGTGGCGATTGTCTCGCTAACCGAAATGGTGGTGTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATAATCGTAAGCGAGTTGAACAACTGAtt > 2:247972‑M2/73‑251 (MQ=255) accaaaccaggcgttgatgtcattacgcatacgcataaagtcgacaccggtcagcTTGGCGTGGACAGCGCAATGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGTAATAATCTGGTGGCGATTGTCTCGCTAACCGAAATGGTGGTGTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTa < 2:132059‑M2/196‑1 (MQ=255) accaggcgttgatgtcattacgcatacgcataaagtcgacaccggtcagcTTGGCGTGGACAGCGCAATGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGTCATAATCTGGTGGCGATTGTCTCGCTAACCGAAATGGTGGTGTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGCGTTGAACAACTGATTACCCGCATGAAAGAGTACGGcc > 1:193547‑M2/51‑251 (MQ=255) caggcgttgatgtcattacgcatacgcataaagtcgacaccggtcagcTTGGCGTGGACAGCGCAATGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGTAATAATCTGGTGGCGATTGTCTCGCTAACCGAAATGGTGGTGTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGACCAACTGATTACCCGCATGAAAGAGTACGGCCAg < 1:73828‑M2/203‑1 (MQ=255) tcattacgcataggcataaagacgacaccggtaagcTTCGCGAGGACAGCGCAATGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGTAATAATCTGGGGGCGATTGTCTCGCTAACCGAAATGGTGGTGTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGAAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCCCATTCAAGAGTACGGCCAGCTGAGCTTTcgc > 2:178320‑M2/37‑251 (MQ=255) tcattacgcatacgcataaagtcgacaccggtcagcTTGGCGTGGACAGCGCAATGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGTAATAATCTGGTGGCGATTGTCTCGCTAACCGAAATGGTGGTGTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTcgc > 2:15349‑M2/37‑251 (MQ=255) cattacgcatacgcataaagtcgacaccggtcagcTTGGCGTGGACAGCGCAATGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGTAATAATCTGGTGGCGATTGTCTCGCTAACCGAAATGGTGGTGTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTcgc < 1:227280‑M2/215‑1 (MQ=255) gacaccggtcagcTTGGCGTGGACAGCGCAATGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGTAATAATCTGGTGGCGATTGTCTCGCTAACCGAAATGGTGGTGTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTAc > 1:93039‑M2/14‑251 (MQ=255) caccggtcagcTTGGCGTGGACAGCGCAATGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGTAATAATCTGGTGGCGATTGTCTCGCTAACCGAAATGGTGGTGTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCg > 1:217674‑M2/12‑251 (MQ=255) | TGACAGGTGAACCAGAGAATCTGCGTAAATATGGCGAACTGGTCTGCATGACGGCTGAAATGATGCTGGAACAGTCGCGGTTGATGCACTTGTTGGCGCAGGATAGCCGTTTGCGGGAAGAACTGGTGATGAACCTGATTCAGGCAGAGGAGAATACTCCCGCACTTACTGAATGGGCGCAACGGCTGGGGATCGATCTCAATCAACCGCGAGTGGTGGCTATTGTTGAGGTCGACAGCGGTCAGCTTGGCGTGGACAGCGCAATGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGTAATAATCTGGTGGCGATTGTCTCGCTAACCGAAATGGTGGTGTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCG > NC_000913/182743‑183228 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |