| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,105,699 | IS1 (+) +9 bp | coding (286‑294/312 nt) | ymdA → | uncharacterized protein YmdA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 290634 = | NA (NA) | 22 (0.830) | 19/490 | 0.4 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 1105699 = | 0 (0.000) | coding (286/312 nt) | ymdA | uncharacterized protein YmdA | |||||
| * | ? | NC_000913 | = 291401 | NA (NA) | 17 (0.640) | 17/490 | 0.5 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 1105707 | 0 (0.000) | coding (294/312 nt) | ymdA | uncharacterized protein YmdA | |||||
CCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/291159‑291401‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTCACATGCCGGTTCCACAATTTGGCCATAAAAATGGATCACGCCCCCTTGCACGGTGCTTCCAGCAATGGCAATAAAA < NC_000913/1105707‑1105464 CCATTCATGGCCAGATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAG < 1:88729/251‑1 TCATGGCCATATCAATGATGTGCTGGTGCGTACCGGGTTGAGAAGCTGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCA < 1:169129/250‑1 ATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTG < 1:113382/250‑1 ACCGGGTTGAGAAGCAGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGAAGAGATAGCGCTGATGTCCGGCAGTGATTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGACCACCTCAAAACCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCCAGATACTGCACTTTT > 2:132055/1‑251 TGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGG > 1:114305/1‑251 CGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTG > 1:132267/1‑251 TAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGT > 1:218942/1‑251 AGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTT > 1:195178/1‑251 GAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTG > 1:1059/1‑251 ACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGAC > 2:41971/1‑251 GCCAGGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATGTGCGCGTTTTTGACATTGCCGCT < 2:14258/251‑1 CCGGCAGTGCTTTTGCCGTTAAGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGCGCACCTCAAAAACACCATCATACACTAAATCAGTACGTTGGCCGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGAACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGCGTAGGTTTTGCCCGGACTAGctc > 1:134127/1‑248 CCGGCAGTGCTTTTGCCGTGACGCACCACCCCGTCAGAAGCTGAACAGGAGGGACATCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAATTTGGCAGCATCACCCATTACAGCCAGCTTTTTTTGTTTAGCAAGATTCTGCGCTTGTACGGAGTCTATTTGCGCGTTTATGACAGTCCGGCTCAGTAACGCTTTGCTTGAGTAGTTTTTGCCCGGAAT < 2:134127/246‑1 GCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGC > 1:149863/1‑249 CCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTAC < 1:261036/251‑1 CAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTCACATGCCGGTTCCACAATTTGGCCATAAAAATGGATCACGCCCCCTTGCACGGTGCTTCCAGCAATGGCAAT > 1:149546/1‑250 CATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTCACATGCCGGTTCCACAATTTGGCCATAAAAATGGATCACGCCCCCTTGCACGGTGCTTCCAGCAATGGCAATAAAA < 2:149863/251‑1 CCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/291159‑291401‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTCACATGCCGGTTCCACAATTTGGCCATAAAAATGGATCACGCCCCCTTGCACGGTGCTTCCAGCAATGGCAATAAAA < NC_000913/1105707‑1105464 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |