New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4498181	2 (0.030)	39 (0.640)	35/478	0.6	96.4%	noncoding (1/1331 nt)	IS2	repeat region
	?	NC_000913	4499518 =	1 (0.020)					intergenic (+18/‑1742)	insD6/yjgZ	IS2 insertion element protein InsB/uncharacterized protein YjgZ

GGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCGGTATATTCCTCTCTCCCTTAAAAACCATAACAGGTTAGTTATCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAA  >  NC_000913/4499268‑4499760                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                   aaacagtaatcatcccgggcaaatgcccgggaattattctaggattattttctttgttaaaaaagacaaacggtattaactgatgtatttactatttaccgctccctgcaggggggattatcagaatccgcggttattcattatttatatacattcaataaaaaagtaacctcataaaaaatcctgtactcacatggtgatgcgggataactgacgtaaggagtgctgcagggatttgatggtcccttgtg                                                                                                                                                                                                                                                    <  2:193114‑M2/1‑1 (MQ=255)            atcccgggcaaatgcccgggaattattctaggattattttctttgttaaaaaagacaaacggtattaactgatgtatttactatttcccgctccctgcaggggggattatcagaatccgcggttattcattatttatatacattcaataaaaaagtaacctcataaaaaatcctgtactcacagggtgatgcgggataactgacgtaaggagtgctgcagggatttgatggtcccttgtGCTGATATGAAt                                                                                                                                                                                                                                         <  2:525532‑M2/12‑1 (MQ=255)                     atagatgagatCTTCGTGAAAACGATAAAGCGTGACTACATCAGTAGCATGCCCAAAACAGATGGGTTAACGGCAGCAAAGAACCTTGCATAGGCGTTGGAGCATTAGAACGAAGTGCAGCAGCAGAGGGCGCGGGGTTATCGCTTGCCACGGTAATGTCTGTGGCAGCGTGCATGTAAGTGTTTAAGTGATAATAGAGGTCATGAAATGTAGGGGCAATTCCTCCTTGAGCTGTTACGAATACGGATAtt                                                                                                                                                                                                                                <  2:611180/245‑1 (MQ=2)                           ccgggaattattctaggattattttctttgttaaaaaagacaaacggtattaactgatgtatttactatttaccgctccctgcaggggggattatcagaatccgcggttattcattatttatatacattcaataaaaaagtaacctcataaaaaatcctgtactcacagggtgatgcgggataactgacgtaaggagtgctgcagggatttgatggtcccttgtGCTGATATGAATACGGATATTTTATAc                                                                                                                                                                                                                          >  2:101205‑M2/225‑251 (MQ=255)                                                          taaaaaagacaaacggaattaactgatgtatttactatttaccgctccctgcaggggggattatcagcatccgcggttattcattatttatatacattcaataaaaaagtaacctcataaaaaatcctgtactcacagggtgatgcgggataactgacgtaaggagtgctgcagggatttgatggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTAtt                                                                                                                                                                                            >  1:466021‑M2/194‑250 (MQ=255)                                                            aaaaagacaaacggtattaactgatgtatttactatttaccgctccctgcaggggggattatcagaatccgcggttattcattatttatatacattcaataaaaaagtaacctcataaaaaatcctgtactcacagggtgatgcgggataactgacgtaaggagtgctgcagggatttgatggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGAATTAc                                                                                                                                                                                          >  2:588000‑M2/192‑250 (MQ=255)                                                                             taactgatgtatttactatttaccgctccctgcaggggggattatcagaatccgcggttattcattatttatatacattcaataaaaaagtaacctcataaaaaatcctgtactaacagggtgatgcgggataactgacgtaaggagtgatgcagggatttgatggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGAtt                                                                                                                                                                        >  1:422444‑M2/175‑251 (MQ=255)                                                                                                                gggggattatcagaatccgcggatattcattatttatatacatgcaataaaaaagtaacctcataaaaaatcctgtactcacagggtgatgcgggataactgacgtaatgagtgctgcagggatttgatggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGAGTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTc                                                                                                                                     <  2:199264‑M2/112‑1 (MQ=255)                                                                                                                      ttatcagaatccgcggttattcattatttatatacattcaataaaaaagtaacctcataaaaaatcctgtactcacagggtgatgcgggataactgacgtaaggagtgctgcagggatttgatggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTg                                                                                                                               >  1:182888‑M2/134‑251 (MQ=255)                                                                                                                         tcagaatccgcggttattcattacttatatacattcaatacaacagtaccctcataaaaactcctttactcacagggtgatgcaggataactgacgtcaggagtgatgcagggatttgcgggtcccttgtGCTGATATGGATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCaaacttact                                                                                                                            >  2:337444‑M2/131‑247 (MQ=255)                                                                                                                          cagaatccgtggatattcattatttatataaattaaataaacaaggaacctcataaaaaatcctgtactcacagagtgatgcgggataactgacgtaaggagtgctgcagggatttgatggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATCTATGATTACCTGTGATCAGTAAGAATACGTGGCTGAGGTTTCAAACTGTCTg                                                                                                                           >  1:194878‑M2/130‑251 (MQ=255)                                                                                                                            aaatacgcggttattcattatttatatacattccataaaaaagtaacctcataaaaaatcctgtactcacagggtgatgcggaataactgacgtaaggagtgctgaagggatttgatggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATAAGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTctgac                                                                                                                         >  2:366686‑M2/128‑249 (MQ=255)                                                                                                                                    ggttattcattatttatatacattcaataaaaaagtaacctcataaaaaatcctgtactcacagggtgatgcgggataactgacgtaaggagtgctgcagggatttgatggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAAt                                                                                                                                                     >  1:141811‑M2/120‑215 (MQ=255)                                                                                                                                    ggttattcattatttatatacattcaataaaaaagtaacctcataaaaaatcctgtactcacagggtgatgcgggataactgacgtaaggagtgctgcagggatttgatggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAAt                                                                                                                                                     <  2:141811‑M2/96‑1 (MQ=255)                                                                                                                                         ttcattatttatatacattcaataaaaacgtaacctcataaaaaatcctgtactcacagggtgatgcgggataactgacgtaaggagtgctgcagggatttgatggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCGGTATATTCctct                                                                                                            >  2:2720‑M2/115‑251 (MQ=255)                                                                                                                                                 ttatatacattcaataaaaaagtaacctcataaaaaatcctgtactcacagggtgatgcgggataactgacgtaaggagtgctgcagggatttgatggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCGGTATATTCCTCTCTCCCtt                                                                                                     >  2:345762‑M2/107‑250 (MQ=255)                                                                                                                                                       acattcaataaaaaagtaacctcataaaaaatcctgtactcacagggtgatgcgggataactgacgtaaggagtgctgcagggatttgatggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCGGTATATTCCTCTCTCCCTTAAAAAcc                                                                                              <  2:150153‑M2/151‑1 (MQ=255)                                                                                                                                                           tcaataaaaaagtaacctcataaaaaatcctgtactcacagggtgatgcgggataactgacgtaaggagtgctgcagggatttgatggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCGGTATATTCCTCTCTCCCTTAAAAACCATa                                                                                           >  1:205027‑M2/97‑250 (MQ=255)                                                                                                                                                            caataaaaaagtaacctcataaaaaatcctgtactcacagggtgatgcgggataactgactgaaggagtgctgcagggatttgattgtcccttgtGCTGATATGAATACGGATATTTTAGACAGAATACGTTGCAGTACAAGCGACTGTATTACAGTCTGCCATATATGAGGACCTGTGATCAGGAAGAATAAGTGTCTGAGGTTGCAAACTGTCTGCCGGTATATTCCTCTCTCCCGTAAAGACCatatc                                                                                         <  2:307870‑M2/156‑3 (MQ=255)                                                                                                                                                               taaaaaagtaacctcataaaaaatcctgtactcacagggtgatgcgggataactgacgtaaggagtgctgcagggatttgatggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCGGTATATTCCTCTCTCCCTTAAAAACCATAACAgg                                                                                      >  1:110503‑M2/93‑251 (MQ=255)                                                                                                                                                                 aaaaagtaacctcataaaaaatcctgtactcacagggtgatgcgggataactgacgtaaggagtgctgcagggatttgatggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCGGTATATTCCTCTCTCCCTTAAAAACCATAAcagggt                                                                                    <  2:284824‑M2/161‑3 (MQ=255)                                                                                                                                                                       aaccctcataaaaaatcctgtactcacagggtgatgcgggataactgacgtaaggagtgctgcagggatttgatggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCGGTATATTCCTCGCTCCCTTAAAAACCATATCAGGTTAGTTAt                                                                              <  1:161268‑M2/167‑1 (MQ=255)                                                                                                                                                                        aacctcataaaaaatcctgtactcacagggtgatgcgggataactgacgtaaggagtgctgcagggatttgatggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCGGTATATTCCTCTCTCCCTTAAAAACCATAACAGGTTAGTTATc                                                                             >  1:88950‑M2/84‑251 (MQ=255)                                                                                                                                                                                 aaaaatcctgtactcacagggtgatgcgggataactgacgtaaggagtgctgcagggatttgatggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCGGTATATTCCTCTCTCCCTTAAAAACCATAACAGGTTAGTTATCTTCGTCTGt                                                                    >  1:174396‑M2/75‑251 (MQ=255)                                                                                                                                                                                 aaaaatcctgtactcacagggtgatgcgggataactgacgtaaggagtgctgcagggatttgatggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCGGTATATTCCTCTCTCCCTTAAAAACCATAACAGGTTAGTGATCTTCGTCTGt                                                                    <  2:110503‑M2/177‑1 (MQ=255)                                                                                                                                                                                  aaaatcctgtactcacagggtgatgcgggataactgacgtaaggagtgctgcagggatttgatggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCGGTATATTCCTCTCTCCCTTAAAAACCATAACAGGTTAGTTATCTTCGTCTGTc                                                                   <  1:345762‑M2/178‑1 (MQ=255)                                                                                                                                                                                        ctgtactcacagggtgatgcgggataactgacgtaaggagtgctgccgggatttgatggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCGGTATATTCCTCTCTCCCTTAAAAACCATAACAGGTTAGTTATCTTCGTCTGTCAGCgg                                                              >  1:415830‑M2/68‑250 (MQ=255)                                                                                                                                                                                          gtactcacagggtgatgcgggagaactgacgtaaggagtgctgcagggatttgatggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTTTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTGTCAAACTGTCTGCCGGTATATTCCTCTCTCCCTTAAAAACCATAACAGGTTAGTTATCTTCGTCTGTCAGCGGa                                                             <  1:110821‑M2/184‑1 (MQ=255)                                                                                                                                                                                            actcacagggtgatgcgggataactgacgtaaggagtgctgcagggatttgatggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCGGTATATTCCTCTCTCCCTTAAAAACCATAACAGGTTAGTTATCTTCGTCTGTCAGCGGATTg                                                          >  1:128084‑M2/64‑250 (MQ=255)                                                                                                                                                                                              tcacagggtgatgcgggataactgaagtacggagcgctgcagggctttgctggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCGGTATATTCCTCTCTCCCTTAAAAACCATAACAGGTTAGTTATCTTCGTCTGTCCGCGGATTGAAt                                                       >  2:298714‑M2/62‑251 (MQ=255)                                                                                                                                                                                               cacagggtgatgcgggataactgacgtaaggagtgctgcagggatttgatggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCGGTATATTCCTCTCTCCCTTAAAAACCATAACAGGTTAGTTATCTTCGTCTGTCAGCGGATTGAATg                                                      >  2:375289‑M2/61‑251 (MQ=255)                                                                                                                                                                                                    ggtgatgcgggctaactgacgaaaggagcgctgcagggatttgatggtcccttgaGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTCCAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCGGTATATTCCTCTCTCCCTTAAAAACCATAACAGGTTAGTTATCTTCGTCTGTCAGCGGATTGAATGGCGGt                                                 >  2:550252‑M2/56‑251 (MQ=255)                                                                                                                                                                                                            gggaatactgacgtaatgagtgctgcatggatttgatggtcccttgtGATGATATTAAAACGTATATATTATTCAGAATACTTTCCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGAAAGAATAAGTGGCTGAGGTTTCAAACTGTCTTCCGGTATATTCCTCTCACCCTTAAAAACCATAACAGGTTAGTTATCTTCTTCTGTCAGCTGATTGAATGGCTGTATATTTTc                                         <  1:159654‑M2/204‑1 (MQ=255)                                                                                                                                                                                                                      acgtaaggattgcttcagggatgtgaaggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAATCGACTGTATTACAGTCTGCCATATATGATTCCCGGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGTCGGTATATTCCTCTCTCCCTTAAAAACCATAACAGGTTAGTTATCTTCGTCTGTCAGCGGATTGAATGGCGGTATATGTTCAGTACAAATa                               <  2:207751‑M2/214‑1 (MQ=255)                                                                                                                                                                                                                                    gcagggatttgatggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCGGTATATTCCTCTCTCCCTTAAAAACCATAACAGGTTAGTTATCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCAc                   <  1:101205‑M2/226‑1 (MQ=255)                                                                                                                                                                                                                                             tgatggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCGGTATATTCCTCTCTCCCTTAAAAACCATAACAGGTTAGTTATCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCAATGAAAAATAcc        >  2:307656‑M2/15‑251 (MQ=255)                                                                                                                                                                                                                                               atggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTc                                                                                                                             >  1:308376‑M2/13‑132 (MQ=255)                                                                                                                                                                                                                                               atggtcccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGCGGCTGAGGTTTCAAACTGTc                                                                                                                             <  2:308376‑M2/120‑1 (MQ=255)                                                                                                                                                                                                                                                    cccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCGGTATATTCCTCTCTCCCTTAAAAACCATAACAGGTTAGTTATCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGaa  >  1:61072‑M2/8‑250 (MQ=255)                                                                                                                                                                                                                                                    cccttgtGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCGGTATATTCCTCTCTCCCTTAAAAACCATAACAGGTTAGTTATCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGaa  >  1:618281‑M2/8‑250 (MQ=255)                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                   GGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCGGTATATTCCTCTCTCCCTTAAAAACCATAACAGGTTAGTTATCTTCGTCTGTCAGCGGATTGAATGGCGGTATATTTTCAGTACAAATACCGGTCATCCACTGAAAAATACCTGCGAA  >  NC_000913/4499268‑4499760

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.