New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3186096 =	NA (NA)	23 (0.570)	23/494	0.6	43.4%	noncoding (1/1331 nt)	IS2	repeat region
	?	NC_000913	= 4366042	30 (0.740)					coding (732/1302 nt)	dcuA	C4‑dicarboxylate transporter DcuA

TCAACAATACCAACAGCTATCAGGAACTGAATTTCAAAGCTCGTATGGAATCCCCAAGCAAAGATGCCACCCCGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCAAT  >  NC_000913/3185847‑3186343                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                        tCAACAATACCAACAGCTATCAAGAACTTAAGTTCAAAGCTCGTAGTGAATTCCCAAGCAAAGATTCCACCCCGGGCAACGTTTTCGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCTCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCTGATGTATAAAAAAGTAAAATTAACCACAAGAAGCGAATTGATTAAAAATTTTTATTGTTCATTATCCGttatt                                                                                                                                                                                                                                                         <  2:255958/250‑1 (MQ=255)                      aGGAACTGAATTTCAAAGCTCGTATGGAATCCCCAAGCAAAGATGTCACCCCGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAAGTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCa                                                                                                                                                                                                                                   <  1:59148/251‑1 (MQ=255)                        gAACTGAATTTCAAAGCTCGTATGGAATCCCCAAGCAAAGTAGCCACCCCGGGAAACGTTTCCGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCGAATTTGGCCGGGTTCGACCGGTCAAATCATTAACGGAATAATAATAAGTGGATCAGATATATAAAAAATTAAAATTAACCACAATAAGCGAATTGCTTAAAAATATTTATTGTTCATTAACCGTTATTAGACTGGCCCCCTGAATCTCCAGa                                                                                                                                                                                                                                 <  2:95519/251‑1 (MQ=255)                        gAACTGAATTTCAAAGCTCGTATGGAATCCCCAAGCAAAGATGCCACCCCGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTcc                                                                                                                                                                                                                                    >  1:61758/1‑248 (MQ=255)                        gAACTGAATTTCAAAGCTCGTATGGAATCCCCAAGCAAAGATGCCACCCCGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGAGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTcc                                                                                                                                                                                                                                    >  1:435057/1‑248 (MQ=255)                                               ggAATCCCCAAGCAAAGATGCCCCCCCGGGAAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTAGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAAGTGATTAAAAATATTTATTGTTCATTAAAAGTTATTAGACTGGCCAACTGAATCTCCAGACAACCAATATCACTTAAATAAGt                                                                                                                                                                                                          <  1:75013/251‑1 (MQ=255)                                                 aaTCCCCAAGCAAAGATGCCACCCCGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTg                                                                                                                                                                                                         >  1:175283/1‑250 (MQ=255)                                                       cAAGCAAAGATGCCACCCCGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCt                                                                                                                                                                                                  <  1:381000/251‑1 (MQ=255)                                                         aGCAAAGATGCCACCCCGGGCAACGTTTACGCTCAGGCTGCCTACAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCtt                                                                                                                                                                                                 >  1:363785/1‑250 (MQ=255)                                                                aTGCCACCCCGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACt                                                                                                                                                                                           >  1:363717/1‑249 (MQ=255)                                                                     aCCCCGGGCAACGATTACGCTCAGGCTAACTCCACGATTGCTTACGAGTAATCGCCTTTGGCCGGGAACGCCCGGCCACATCATTCACGGCTTAATGATAAGTGGATCAGATGCATAAAAACTTAAACTTAACCACAATAAGCGACTTGATTAAAAATCTTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGttttt                                                                                                                                                                                    >  2:412236/1‑251 (MQ=37)                                                                              aaCGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTc                                                                                                                                                                           <  1:357599/251‑1 (MQ=255)                                                                               aCGTTAACGCTCAGGCTGACTAAAAGATTGCTTAAGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTATTAGACTAGTc                                                                                                                                                                           >  1:144436/1‑250 (MQ=255)                                                                                    tACGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTgg                                                                                                                                                                      <  1:354214/250‑1 (MQ=255)                                                                                    tACGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTgg                                                                                                                                                                      >  1:100860/1‑250 (MQ=255)                                                                                                gACTACACGATTGCTTAAGAGTAATCGCATTTGGCCGGATTCGCCCGGCAACATCATTACCGGCTTAATGATAAGTGGATCAGATGTATAAAACATTAAAATTAACCACAATAAGCGAGTTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGACCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGCCTTAATACTAGTTTTTCGCCTAGTCATTGGAGAACAGattatt                                                                                                                                                         >  2:66778/1‑251 (MQ=37)                                                                                                gACTACAAGATTTCTTTCGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAgatgat                                                                                                                                                          <  2:191149/250‑1 (MQ=255)                                                                                                            gCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAggg                                                                                                                                             >  1:329470/1‑251 (MQ=255)                                                                                                              ttACGTGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTAATTGGAGAACAGATGATTGATGTCTTAGGGcc                                                                                                                                           >  1:324629/1‑251 (MQ=255)                                                                                                              ttACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGcc                                                                                                                                           >  1:124716/1‑251 (MQ=255)                                                                                                                      aaTCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAAc                                                                                                                                   <  1:252475/251‑1 (MQ=255)                                                                                                                                ggCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCg                                                                                                                         <  1:404783/251‑1 (MQ=255)                                                                                                                                      gTTCGCCCAGCCACATCATTAACGGCTTAATGATAACTAGAAAAGTTGTATACAAACTTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCACCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACAAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGCGAAACGCAGACGACGTACcac                                                                                                                   >  2:433704/1‑251 (MQ=21)                                                                                                                                                  acaTCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCAGTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGAt                                                                                                       <  2:186446/251‑1 (MQ=255)                                                                                                                                                          aaCGGATTAATGATAAGTGGATTAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATAGATTAAATATATTTATTTTGCATTATCCGTTATTAGACTGGCCCCCTGAATCTGCAGACAACCAAGATCACTTAGATAAGTGATATGCTTAATACCAGTGTTTAGACTAGTCATTGGAGAACAGATGATTTATGTCTTAGGGTCGGAGAAGCGCAGACGGCGTACCACACAGGAAAAGACCGCAAtt                                                                                                <  1:456802/250‑1 (MQ=255)                                                                                                                                                            cGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGtt                                                                                             >  2:258774/1‑251 (MQ=255)                                                                                                                                                                                                  aaattaaCCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGt                                                       >  1:118937/1‑251 (MQ=255)                                                                                                                                                                                                        aCCACAAGAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATGAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTGTTTAAACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCTCTCAGGAATAGATCGCAATTGTTCAGCAGAGCTTTGGACCGGGGATGACGGTCTCCCTCGTTGCCCg                                                 <  1:342323/251‑1 (MQ=17)                                                                                                                                                                                                             aaTAAGCGAATTGATTAAAAATATTTATTGATCATTATCCGATATGAGACTGGCCCCCTGAATCTCCAGACAACCAATATCAATTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAAc                                            >  1:295180/1‑251 (MQ=255)                                                                                                                                                                                                                        tGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCACCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGCTGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTagc                                  >  1:38134/1‑250 (MQ=255)                                                                                                                                                                                                                              aaaaTATTTATTGTTACTTATCCGTTATTAAACTGACCCCCTGAATCTCCAGACAACCAATATCACTTAAATCAGTGATAGCCTTAACACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGCGCCGGAGAAACGCAAACGGCGTACCACACAGGCAAAGATCGCCATTGTTCAGACGAGCTTTGACCAGGGGATGACGGTACCCCCCGTTGCCCGGCAACATGGTATCGcagccagc                           >  2:402645/1‑251 (MQ=11)                                                                                                                                                                                                                                  tatttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGt                       >  1:281826/1‑251 (MQ=40)                                                                                                                                                                                                                                        ttGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCCCTATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGCTGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTtc                 >  1:199273/1‑251 (MQ=255)                                                                                                                                                                                                                                             cATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACACCCACTATCACTTAAATAAGCGATCGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGATATTTCTCTgg            >  2:199838/1‑251 (MQ=255)                                                                                                                                                                                                                                               ttATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCg          >  1:219908/1‑251 (MQ=33)                                                                                                                                                                                                                                               ttATCCGTTATTAGACTGGCCCCCTGAATCTACAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCg          >  1:382113/1‑251 (MQ=18)                                                                                                                                                                                                                                                  tCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCCATATCCCTTACCTAAGTGATAGTCTTAATACTAGTTTTTAGACTAGACATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTa        >  1:359186/1‑250 (MQ=255)                                                                                                                                                                                                                                                   ccGTTATTAGACTGGCCCCCTGAATCTCCAGCCAACCAATATCACTTAAATAAGTGATAGTCTTAAGACTAGTTGTGAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCTGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTaa       <  2:175283/250‑1 (MQ=255)                                                                                                                                                                                                                                                        attaGATTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCAAt  >  1:122187/1‑250 (MQ=11)                                                                                                                                                                                                                                                        attaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCAAt  <  2:61758/250‑1 (MQ=11)                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                        TCAACAATACCAACAGCTATCAGGAACTGAATTTCAAAGCTCGTATGGAATCCCCAAGCAAAGATGCCACCCCGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCAAT  >  NC_000913/3185847‑3186343

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.