Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	3,931,171	IS4 (–) +12 bp	intergenic (‑78/‑134)	ravA ← / → kup	regulatory ATPase RavA/K(+):H(+) symporter Kup

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3931171 =	0 (0.000)	24 (0.900)	23/490	0.3	100%	intergenic (‑78/‑145)	ravA/kup	regulatory ATPase RavA/K(+):H(+) symporter Kup
	?	NC_000913	= 4503515	NA (NA)					noncoding (1/1426 nt)	IS4	repeat region
*	?	NC_000913	= 3931182	0 (0.000)	16 (0.610)	15/488	0.6	100%	intergenic (‑89/‑134)	ravA/kup	regulatory ATPase RavA/K(+):H(+) symporter Kup
	?	NC_000913	4502090 =	NA (NA)					noncoding (1426/1426 nt)	IS4	repeat region

CAGACCATCATTTCGAGGGGAAGACGGCGCTTGCGTAGCGTTACAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTCTTTCCTCATTTGACGAAGGGAGTTTTATTCAACCTGAACGGACTACG  >  NC_000913/4503265‑4503761                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                       cAGACCAGCATTTCGAGGGGAAGACGGCGCTTGCGTAGCGTTACAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTa                                                                                                                                                                                                                                                        <  1:342/251‑1 (MQ=255)   gACCATCATTTCGAGGGGAAGACGGCGCTTGCGTAGCGTTACAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTTAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAAt                                                                                                                                                                                                                                                      <  1:84081/251‑1 (MQ=255)    aCCATCATTTCGAGGGGAAGACGGCGCTTGCGTAGCGTTACAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATc                                                                                                                                                                                                                                                     >  1:174347/1‑251 (MQ=255)    aCCATCATTTCGAGGGGAAGACGGCGCTTGCGTAGCGTTACAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATc                                                                                                                                                                                                                                                     >  1:35834/1‑251 (MQ=255)                aGGGGAAGACGGCGCTTGCGTAGCGTTACAGTACATGATTCGGCAAGGCAACGAGCGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACTAAGAGAATCGTACCGGGATACCAGATCAAGAGCCTGTCCAGTGGGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGCTTGTTACACTACCACTGGATCGTGCATCTGATCCTTAACTGATCGGCATTActcacaggggtggc                                                                                                                                                                                                                                          <  2:144554‑M2/250‑15 (MQ=255)                     aaGACGGCGCTTGCGTAGCGTTACAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGt                                                                                                                                                                                                                                    <  2:35834/251‑1 (MQ=255)                       gACGGCGATTGCGTAGCGTTACAGTACCTGATTCGACAAGGCAACGAGAGATGAGCTCGGGGTCGAGGTAATACCCCAGAGAAGACAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGCAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCCACTGATCCTTAACTGATCGGCATTActcaacgggggggtatttttct                                                                                                                                                                                                                                  <  2:21066‑M2/251‑23 (MQ=255)                          ggCGCTTGCGTAGCGTTACAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCACCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttg                                                                                                                                                                                                                               <  1:106574‑M2/251‑26 (MQ=255)                             gcgtGCGGAGCGTTACAGTTCCAGATTCGGAAAGGCAACGAGAGATGAGTTCGGGGGCGAGGTAATCCCCCAGAGATGGCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAAGTTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTTCACAGCCACGGGATCGGTCAACTGATCCTTAACTGAGCGGCAGTAATCTTGGGTCTGGTGTTTGTAACaacct                                                                                                                                                                                                                            <  2:89052/248‑4 (MQ=255)                                 gCGTAGCGTTACAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGCGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccagg                                                                                                                                                                                                                        <  2:205133‑M2/251‑33 (MQ=255)                                   gTAGCGTTACAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAATCAAGTGAGCGTTTCCGTATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGTCATTActcaaagggggggtatttttctttgagccaggtt                                                                                                                                                                                                                      >  1:253565‑M2/1‑217 (MQ=255)                                     aGCGTTATAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCCGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATAAGCt                                                                                                                                                                                                                     >  1:51713/1‑250 (MQ=255)                                         ttACAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtg                                                                                                                                                                                                                <  2:94267‑M2/251‑41 (MQ=255)                                          tACAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACaaa                                                                                                                                                                                                                >  1:45157/1‑250 (MQ=255)                                           aCAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttctctttgagccaggttgatgtgg                                                                                                                                                                                                               >  1:74974‑M2/1‑209 (MQ=255)                                                  cggatgcGGCAAGGCAACGAGAGATGAGTTCGGGTTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAAGCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTc                                                                                                                                                                                                       <  2:3177/245‑1 (MQ=255)                                                   tGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTc                                                                                                                                                                                                       >  1:27996/1‑250 (MQ=255)                                                    gATTCGGCAAGGCAACGAGAGATGAGGTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAAGCGTAACGGGATACCAGATCAAGAGCCTGCCCAATGTGCAGAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagtgggggtatttttctttgagccaggttaatgtggccgcattta                                                                                                                                                                                                      >  2:253285‑M2/1‑200 (MQ=255)                                                       tCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttagga                                                                                                                                                                                                   >  1:164178‑M2/1‑197 (MQ=255)                                                       tCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttagga                                                                                                                                                                                                   >  1:56421‑M2/1‑197 (MQ=255)                                                           caaggcaaCGATATATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGGTACGCATAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAAGGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGa                                                                                                                                                                                              <  2:139207/251‑1 (MQ=255)                                                             aggcaaCGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgat                                                                                                                                                                                            >  2:157059‑M2/1‑191 (MQ=255)                                                                caaagggagatgagtgCGGGGTCGAAGGAATCCCCCAGAGAAGTAAGAGGGGTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCGCTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggtgtatttttctttgagccagggtaaggtggccgcatttaggagtacgatttt                                                                                                                                                                                         >  2:29991‑M2/7‑188 (MQ=255)                                                                    gagagaTGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCAGTCCAATGGGCATAAAAAAATCCGGAAACAAGTGAGCTTTTCCGGAGTCTTACACAGCCACTGGATCGGTCAACTTATCCTTAACTGAGCGGCATTAATCTTGGTTCTGGTGGTTGGAACAAACGATCAGCTACAAAAATATTCTCAAGTTGTGACTTCAGTaa                                                                                                                                                                                     <  2:270878/251‑1 (MQ=255)                                                                                    gTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCAGGATTCTTACACAGACTATAGATCGGTCAACTAATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGtt                                                                                                                                                                     <  1:144330/251‑1 (MQ=255)                                                                                         ggTAATCCCCCAGAGAAGTCAGTGGGTTATGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTATCTGATCGGCATTAATCTTGGTTCTGGTGTTTGTATCAAACTATCAGCTGCGAAAATATGCTCAAGTTGTGACATCAGTAACAAAACGCGTTTTGTTAtgtg                                                                                                                                                                <  1:262597/251‑1 (MQ=255)                                                                                            aaTCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTTTTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGa                                                                                                                                                              <  1:159630/250‑1 (MQ=255)                                                                                                            cAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACAGCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATc                                                                                                                                             <  2:204101/251‑1 (MQ=255)                                                                                                                    tACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAAGCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGtata                                                                                                                                      <  2:47911/250‑1 (MQ=255)                                                                                                                       ccaGATAATCGTAACGGGATACCAGATCAAGAGCCGGTCCAATGGGCATAAAAAAATCCGGAAACAATGGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGTCATTActcaaagggggggtatttttcgttgagccaggttaatgtgggcgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggctaagggactaagcccaca                                                                                                                                  >  2:89456‑M2/2‑133 (MQ=255)                                                                                                                        ccaaaaaTCCTAACGGGATCCCAGATCAAGTGCCGGTCCAAGGGGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGCATTCTTACACAGCCACTGGATCTGTCAACTGATCCTTAACTGATAGGCATTAATCTTGGTTCTGTTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTGATGTGGATTGCTGGTTTTTTGATCTGGTAGAACAgg                                                                                                                                 <  2:267555/246‑1 (MQ=255)                                                                                                                                 gTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGt                                                                                                                        <  1:43321/251‑1 (MQ=255)                                                                                                                                   aaCGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcacacatttcatatttc                                                                                                                       <  1:107264‑M2/250‑130 (MQ=255)                                                                                                                                      gggATACCAGATCAAGAGCCTGTTCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACa                                                                                                                   <  2:55049/251‑1 (MQ=255)                                                                                                                                      gggATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcacacatttcatatttcaacg                                                                                                                   >  1:94267‑M2/1‑118 (MQ=255)                                                                                                                                                  cAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcacacatttcatatttcaacgaaagactagtct                                                                                                       >  1:228425‑M2/1‑106 (MQ=255)                                                                                                                                                    agaaCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGCTCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttcggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcccaaatttaatattacaacgaaagactagtctat                                                                                                     <  2:159750‑M2/251‑148 (MQ=255)                                                                                                                                                                  gtgCATAAAAAAATCCGGAAACAAGTTAGCGTTTCCGGATGCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCAGTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTGTTTTGATCTGGTATAACTGGTATAAAGGTATACAGAAAAGCAAAGGAATTCTGCAAAGGaa                                                                                        <  2:253302/250‑1 (MQ=255)                                                                                                                                                                              aTCCGGAAACAAGTGAGCTTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcacacatttcatatttcaacgaaagactagtctatgagcactgataataagcaatcattgc                                                                           >  2:135104‑M2/1‑78 (MQ=255)                                                                                                                                                                                    aaaCAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCTTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAATTTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCt                                                                     <  1:134065/251‑1 (MQ=255)                                                                                                                                                                                        aaGTGAGCATTGCCGGCTTCTTTCACAGCCTCTGGATCGGTCAACTGATCCGTGACTGCTCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtactattttgccggtaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcacacatttcatatttcaacgaaagactaggctatgagcactgataataagcaatcagtgcccgcgattac                                                                 >  1:119284‑M2/1‑68 (MQ=255)                                                                                                                                                                                           tGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTCATCTTGGTTCTGGTGTTTGTAACAACCTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGaata                                                                                                                     >  2:875/1‑196 (MQ=255)                                                                                                                                                                                           tGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGAGCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGGTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGtata                                                                                                                     <  1:875/196‑1 (MQ=255)                                                                                                                                                                                            gAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcacacatttcatatttcaacgaaagactagtctatgagcactgataataagcaatcattgcccgcgattaccctc                                                             <  1:237172‑M2/251‑188 (MQ=255)                                                                                                                                                                                                    ccGGTTTCTTACACATGCACTGGATCGGTCTACTGATCCTTAACTGATCGGCTTTTctcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcacacatttcatatttcaacgaaagactagtctatgagcactgataataggcaatcattgcccgcgattaccctcgcggcgat                                                     >  1:112610‑M2/1‑56 (MQ=255)                                                                                                                                                                                                                acaGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTCTTTCCTc                                          >  2:206195/1‑250 (MQ=255)                                                                                                                                                                                                                            tCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagtcaggttaatgtggccgcatttaggagtacgatttagccgttaatcgtgcatactgtgcgcttttttgtgggcaaagggcctaagcactcatttcatatttcaacgaaagactagtctatgagcactgatattaagcaatcattgcccgcgattaccctcgcggcgattggggttgtctacggcgatattgg                             <  1:248778‑M2/251‑220 (MQ=255)                                                                                                                                                                                                                                 cAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGAGTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTCTTTCCTCATTTGACGAAGGGAGttt                        <  1:152322/251‑1 (MQ=255)                                                                                                                                                                                                                                    cTGATCCTTAACTGATCGGCATTActcaaagggggtgtatttttctttcagccaggttaatgcggccgcatttaggcgtacgattttgccgttaatcgtgaatactgtgcgcttttttgtgggccaagggcctaagcacacatttcatatttcaacgaaagactaggctatgagcactgctattaagcaatcattgtccgcgattaccctcgcggcgacttgcgttgtctacggcgctattagtaccagcc                     <  2:22133‑M2/251‑228 (MQ=255)                                                                                                                                                                                                                                            tAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTGGGGACATCAGTTACAAAACGCGTTTTGTTATGTGGATTGCTTTGTTTTGGAGCTGGTATAACAGGTATAAAGGTATACAGAAAAGCATAGAAATACTGCAAAGGAAAACAGCTAGAACGTAATCTAAAGTAATATCCTCTCAGTCTTTCCTCATTTGACGAAGGGAGTTTTATTCAACCt              <  1:277539/250‑1 (MQ=255)                                                                                                                                                                                                                                                        aTTActcaaagggggggtatttttctttgagccaggataatgcggccgcatttaggagtacgattttgccgttaatcgagcatactgtgcgcttttttgtgggccaagggactaagcacacatttcatatttcaacgaaagactagtctatgagcactgataataagcaatcattgcccgcgattaccctcgcggcgattggagttgtctacggcgatattggtaccagcccgttatatacacttcgtga  <  1:241894‑M2/250‑247 (MQ=255)                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                       CAGACCATCATTTCGAGGGGAAGACGGCGCTTGCGTAGCGTTACAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTCTTTCCTCATTTGACGAAGGGAGTTTTATTCAACCTGAACGGACTACG  >  NC_000913/4503265‑4503761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.