Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,960,601 IS2 (+) +5 bp intergenic (‑788/‑72) ppiC ← / → rep peptidyl‑prolyl cis‑trans isomerase C/ATP‑dependent DNA helicase Rep

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3960601 =0 (0.000)42 (1.590) 39/488 0.0 100% intergenic (‑788/‑76) ppiC/rep peptidyl‑prolyl cis‑trans isomerase C/ATP‑dependent DNA helicase Rep
?NC_000913 = 4499511 NA (NA)noncoding (1331/1331 nt) IS2 repeat region
* ? NC_000913 = 39606050 (0.000)38 (1.440) 35/488 0.1 100% intergenic (‑792/‑72) ppiC/rep peptidyl‑prolyl cis‑trans isomerase C/ATP‑dependent DNA helicase Rep
?NC_000913 4498181 = NA (NA)noncoding (1/1331 nt) IS2 repeat region

CGGCCATCGTAATACGTCGTGCTGAACGGTCCATTTTGGCTAACAGGATAGTTACCAAAGTTGCATTCCAGTATTTCACCAACCTTAGGGCTGAAATTAATCGCCACGAGTAAACCTCTCCTTAGTAAACTCTGAAAAAGTAATAACACAACGTTACGACCCGATATTTTCTAAGTCTAATGGATTCACGATGAACTCCGATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCCCTGCCTGGTGCTGGCGGGCGCGGGTTCCGGTAAAACTCGTGTTATCACCAATAAAATCGCCCATCTGATCCGCGGTTGCGGTTATCAGGCGCGGCACATTGCGGCGGTGACCTT  >  NC_000913/3960354‑3960840
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                               
cGGCCATCGTAATACGTCGTGCTGAACGGTCCATTTTGGCTAACAGGATAGTTACCAAAGTTGCATTCCAGTATTTCACCAACCTTAGGGCTGAAATTAATCGCCACGAGTAAACCTCTCCTTAGTAAACTCTTAAGAAGTAATAACACAACGTTACGACCCGATATTTTCTAAGTCTAATGGATTCACGATGAACTCCGATTTCGGTCTTCTTTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCgg                                                                                                                                                                                                                                              <  1:36261/251‑1 (MQ=255)
  cggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCt                                                                                                                                                                                                                                            >  2:102638‑M1/246‑251 (MQ=255)
   ggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCtt                                                                                                                                                                                                                                           <  1:85628‑M1/7‑1 (MQ=255)
     aTCGTAATACGTCGTGCTGAACGGTCCATTTTGGCTAACAGGATAGTTACCAAAGTTGCATTCCAGTATTTCACCAACCTTAGGGCTGAAATTAATCGCCACGAGTAAACCTCTCCTTAGTAAACTCTGAAAAAGTAATAACACAACGTTACGACCCGATATTTTCTAAGTCTAATGGATTCACGATGAACTCCGATTTCTGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtaga                                                                                                                                                                                                                                         <  1:80917‑M1/251‑5 (MQ=255)
       cGTAATACGTCGTGCTGAACGGTCCATTTTGGCTAACAGGATAGTTACCAAAGTTGCATTCCAGTATTTCACCAACCATAGGGCTGAAATTAATCGCAACGAGTAAACCTCTCCTTAGTAAACTCTGAAACAGTAATAACACAACGTTACGACCCGATATTTTCTAAGTCTAATGGATTCACGCTGAACTCCGATTACGGTCTTCTCTCTCTGATTTAACCATCCGCAGCCAACCGGTTAGCGGCtagact                                                                                                                                                                                                                                       >  2:20425‑M1/1‑245 (MQ=255)
        ccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgtgcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACAcg                                                                                                                                                                                                                                      >  1:43085‑M1/240‑251 (MQ=255)
                    gCTGAACGGTCCATTTTGGCTAACAGGATAGTTACCAAAGTTGCATTCCAGTATTTCACCAACCTTAGGGCTGAAATTAATCGCCACGAGTAAACCTCTCCTTAGTAAACTCTGAAAAAGTAATAACACAACGTTACGACCCGATATTTTCTAAGTCTAATGGATTCACGATGAACTCCGATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatc                                                                                                                                                                                                                          <  2:215546‑M1/251‑20 (MQ=255)
                                agcttcgtgaaaacgataaatcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaataaccttgcagatgcgttcgagcattataacgaatggcatccgcatagggcggtgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACTCGGTCACATGCAAATGCCATTCTg                                                                                                                                                                                                              >  2:213023‑M1/216‑251 (MQ=255)
                                  tttGGCTAACAGGATAGTTACCAAAGTTGCATTCCAGTATTTCACCAACCTTAGGGCTGAAATTAATCGCCACGAGTAAACCTCTCCTTAGTAAACTCTGAAAAAGTAATAACACAACGTTACGACCCGATATTTTCTAAGTCTAATGGATTCACGATGAACTCCGATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaat                                                                                                                                                                                                            >  1:105217‑M1/1‑218 (MQ=255)
                                      gtgaaaacgataaagcgtgactacaacagtatcatgcccaaaccatacgggttaacggcagtaaagaaccttgcagaggcgttcgatcattataacgaatggcatccgcatagtgcgcaggtttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttgagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGGCACATTCAAATGCGTTTCTGCTACaa                                                                                                                                                                                                        >  2:195477‑M1/210‑251 (MQ=255)
                                         aaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggataacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGGCACATTCAAATGCGATTCTGCTACAAtcc                                                                                                                                                                                                     <  1:254176‑M1/45‑1 (MQ=255)
                                         aaaacgataaagcgtgactacatcagtatcaggcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAAtcc                                                                                                                                                                                                     >  1:100465‑M1/207‑251 (MQ=255)
                                            acgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAACTGCGATTCTGCTACAAtcctcc                                                                                                                                                                                                  <  2:16097‑M1/48‑1 (MQ=255)
                                             ctataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGGCACATTCAAATGCGATTCTGCTACAATCCTccc                                                                                                                                                                                                 <  2:170897‑M1/49‑1 (MQ=255)
                                             cgataaagcgtgactacatcagtatcatgcccaatccagacgggttaactgcagcaaagaaccttgcagaggctttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgcgcgccacgtgaatatctgcggcagcgggcttgtaatgggttaagggataacagatgtctggaaatatagggtcaaatcctGCGGCTTACGCGCTGTCACATTCAAATGCGATTCTGCTACAATCCTccc                                                                                                                                                                                                 >  1:154948‑M1/203‑251 (MQ=255)
                                                     cgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCg                                                                                                                                                                                         >  1:1214‑M1/195‑251 (MQ=255)
                                                      ccAAAGTTGCATTCCAGTATTTCACCAACCTTAGGGCTGAAATTAATCGCCACGAGTAAACCTCTCCTTAGTAAACTCTGAAAAAGTAATAACACAACGTTACGACCCGATATTTTCTAAGTCTAATGGATTCACGATGAACTCCGATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatag                                                                                                                                                                                        <  2:184188‑M1/251‑54 (MQ=255)
                                                            ttGCATTCCAGTATTTCACCAACCTTAGGGCTGAAATTAATCGCCACGAGTAAACCTCTCCTTAGTAAACTCTGAAAAAGTAATAACACAACGTTACGACCCGATATTTTCTAAGTCTAATGGATTCACGATGAACTCCGATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctta                                                                                                                                                                                   >  1:191198‑M1/1‑192 (MQ=255)
                                                                  gtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCAAt                                                                                                                                                                            >  1:265843‑M1/182‑251 (MQ=255)
                                                                        ggcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgtttgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCAATACACCt                                                                                                                                                                      >  2:143528‑M1/176‑251 (MQ=255)
                                                                          ttCACCAACCTTAGGGCTGAAATTAATCGCCACGAGTAAACCTCTCCTTAGTAAACTCTGAAAAAGTAATAACACAACGTTACGACCCGATATTTTCTAAGTCTAATGGATTCACGATGAACTCCGATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag                                                                                                                                                                     <  1:194989‑M1/250‑73 (MQ=255)
                                                                          ttCACCAACATTAGGGCTGAAATTAATCGCCACGAGTAAACCTATCCTTAGTAAACTCTGAAAAAGTAATAACACAACGTTACGACCCGATATTTTCTACGTCTAATGGATTCACGATGAACTCCGATTTCGGTATTATCTCTCTGATTTAAACATCCGCAGCAAACCGGTTAGAGGCtcgactggccccctgaatctccagacaaccaatataacttaaataagtgataggcttaatactagttttt                                                                                                                                                                       >  1:31881‑M1/1‑178 (MQ=255)
                                                                           ccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgaacattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCAATACACCTATg                                                                                                                                                                   <  1:194558‑M1/79‑1 (MQ=255)
                                                                             aaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCAATACACctatacg                                                                                                                                                                 <  1:56577‑M1/81‑4 (MQ=255)
                                                                                 aCCTTAGGGCTGAAATTAATCGCCACGAGTAAAACTCCCCTAAGAACACTATCAAAAAGTAATAACACAACGTTACGACCCGATATTTTCAAAGTCTAATCGATTCACGCTGAACTCCGATTTCCATCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctcccgacaaccaatatcacttaactaagtgatagtcttaatactagtttttagactagtc                                                                                                                                                              >  1:124334‑M1/1‑171 (MQ=255)
                                                                                  agacgggttaacggcagcaaagaaacttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTa                                                                                                                                                             <  1:61055‑M1/85‑1 (MQ=255)
                                                                                      aGGGCTGAAATTAATCGCCACGAGTAAACCTCTCCTTAGTAAACTCTGAAAAAGTAATAACACAACGTTACGACCCGATATTTTCTAAGTCTAATGGATTCACGATGAACTCCGATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgga                                                                                                                                                        <  1:239953‑M1/251‑86 (MQ=255)
                                                                                       gggCTGAAATTAATCGCCACGAGTAAACCTCTCCTTAGTAAACTCTGAAAAAGTAATAACACAACGTTACGACCCGATATTTTCTAAGTCTAATGGATTCACGATGAACTCCGATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgg                                                                                                                                                         >  1:187649‑M1/1‑165 (MQ=255)
                                                                                        ggCTGAAATTAATCGCCACGAGTAAACCTCTCCTTAGTAAACTCTGAAAAAGTAATAACACAACGTTACGACCCGATATTTTCTAAGTCTAATGGATTCACGATGAACTCCGATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgg                                                                                                                                                         >  1:193841‑M1/1‑164 (MQ=255)
                                                                                               aTTAATCGCCACGAGTAAACCTCTCCTTAGTAAACTCTGAAAAAGTAATAACACAACGTTACGACCCGATATTTTCTAAGTCTAATGGATTCACGATGAACTCCGATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatg                                                                                                                                               <  1:87716‑M1/251‑95 (MQ=255)
                                                                                                  aaTCGCCACGAGTAAACCTCTCCTTAGTAAACTCTGAAAAAGTAATAACACAACGTTACGACCCGATATTTTCTAAGTCTAATGGATTCACGATGAACTCCGATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgat                                                                                                                                             <  2:196115‑M1/250‑97 (MQ=255)
                                                                                                   caaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCcaacaaca                                                                                                                                            <  1:95989‑M1/102‑1 (MQ=255)
                                                                                                      gCCACGAGTAAACCTCTCCTTAGTAAACTCTGAAAAAGTAATAACACAACGTTACGACCCGATATTTTCTAAGTCTAATGGATTCACGATGAACTCCGATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatg                                                                                                                                        <  2:226333‑M1/251‑102 (MQ=255)
                                                                                                       gacccttgcggcggcgttcgagcattctaacgaatggcgtccggatagtgcgctgggtaatcgcccgccacgggaatatccgcggcagcgggcttgtaatgggttaggtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACCCGCGGTCACATTCCAATGCGATTCTGCTACCATCCTCTCCCCGTTCGAAGATTGAGCCATACACCTATGCGTCTACACCCCGGCCAACAACCAGCTg                                                                                                                                       <  2:40567‑M1/107‑1 (MQ=255)
                                                                                                            ttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGCTTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACCACAATCTGTCGa                                                                                                                                   <  2:181168‑M1/111‑1 (MQ=255)
                                                                                                             gTAAACCTATCATTAGTAAACTCTGAAACAGTAATAACACAACGTTACGACCCGATATTTTCTAAGTCTAATGGATTCACGATGAACTCCGATTTCGGTCTTCTCTCTCTGATTTCAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagaccaccactatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaaccgatgattgatgtcttagg                                                                                                                                 >  2:240790‑M1/1‑143 (MQ=255)
                                                                                                                  gggcgttcgagcattataacgaatggcatccgcatagtgtgttgggttatcgctcgccacgggaatatctgcggcagcgggcgtgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCGGTCGAATTCGtt                                                                                                                            >  2:121675‑M1/134‑251 (MQ=255)
                                                                                                                     cgttcgagcattataacgaatggcagccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTAcc                                                                                                                         >  2:76167‑M1/131‑251 (MQ=255)
                                                                                                                         cgagcattataacgaatggcatccgcatcgtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgatcacagatgtctggaaatataggggcaaatacaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCCATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGcc                                                                                                                     <  2:238443‑M1/125‑1 (MQ=255)
                                                                                                                              aaaCTCTGAAAAAGTAATAACACAACGTTACGCCCCGATATTTTCTACGTCTAATGGACTCACGATGAACTCCGCTTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagacttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagac                                                                                                                >  2:161701‑M1/1‑126 (MQ=255)
                                                                                                                              aaaCTCTGAAAAAGTAATAACACAACGTTACGACCCGATATTTTCTAAGTCTAATGGATTCACGATGAACTCCGATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagac                                                                                                                <  2:193841‑M1/251‑126 (MQ=255)
                                                                                                                                   ctGAACAAGTAATCACACAACGTTACGCCAAGCTCTTTTCTAAGTCTAATGGATTCACGATGAACTCCGATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacctaaatacgtgctagtcttaatactagtttttagactagtcatttgagaacagatgcttgatgtcttagggccggagaaacgcagccggcgt                                                                                                           >  2:179095‑M1/1‑121 (MQ=255)
                                                                                                                                      aaaaaGTAATAACACAACGTTACGACCCGATATTTTCTAAGTCTAATGGATTCACGATGAACTCCGATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagccggcgtacc                                                                                                        >  2:203511‑M1/1‑118 (MQ=255)
                                                                                                                                          aGTAATAACACAACGTTACGACCCGATATTTTCTAAGTCTAATGGATTCACGATGAACTCCGATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacac                                                                                                    <  1:240790‑M1/251‑138 (MQ=255)
                                                                                                                                                  catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCGCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCCCTGCCTGGTGCTGGCGGGCGCggg                                                                                            >  1:42221‑M1/102‑251 (MQ=255)
                                                                                                                                                  cacaACGTTACGACCCGATATTTTCTAAGTCTAATGGATTCACGATGAACTCCGATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacttaaataagggatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaa                                                                                              >  2:241061‑M1/1‑106 (MQ=255)
                                                                                                                                                  cacaACGTTACGACCCGATATTTTCTAAGTCTAATGGATTCACGATGAACTCCGATTTCGGTCTTCTCTCTCTGATTTAAACATCAGAAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacttaaataagagatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaa                                                                                              >  1:18767‑M1/1‑106 (MQ=255)
                                                                                                                                                           ctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatacaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTTGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACATGCTGTCGAATTCGTTACCGGCCTCTGACTGGTGCTGGCGGGCGCGGGTTccggat                                                                                    <  1:109870‑M1/158‑3 (MQ=255)
                                                                                                                                                             gggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCCCTGCCTGGTGCTGGCGGGCGCGGGTTCCGGTaaaa                                                                                 >  1:1849‑M1/91‑251 (MQ=255)
                                                                                                                                                              aCCCGATATTTTCTAAGTCTAATGGATTCACGATGAACTCCGATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgtt                                                                                <  1:94893‑M1/251‑158 (MQ=255)
                                                                                                                                                                   tcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCCCTGCCTGGTGCTGGCGGGCGCGGGTTCCGGTAAAACTCgtg                                                                           <  1:49250‑M1/167‑1 (MQ=255)
                                                                                                                                                                   atatTTTCTAAGTCTAATGGATTCACGATGAACTCCGATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagc                                                                            >  1:188950‑M1/1‑89 (MQ=255)
                                                                                                                                                                    cgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCCCTGCCTGGTGCTGGCGGGCGCGGGTTCCGGTAAAACTCgtg                                                                           >  2:194558‑M1/84‑250 (MQ=255)
                                                                                                                                                                     atTTTCTAAGTCTAATGGATTCACGATGAACTCCGATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgaagacggcgtaccacacaggaaaaggtggcaattgttcagc                                                                            >  1:150949‑M1/1‑87 (MQ=255)
                                                                                                                                                                      ctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCCCTGCCTGGTGCTGGCGGGCGCGGGTTCCGGTAAAACTCCTGtt                                                                         <  2:215783‑M1/169‑1 (MQ=255)
                                                                                                                                                                        cgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCCCTGCCTGGTGCTGGCGGGCGCGGGTTCCGGTAAAACTCGTGTTa                                                                        >  2:85628‑M1/80‑249 (MQ=255)
                                                                                                                                                                              gggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAATCCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCGCTTGGGTGGTGCTGGCGGGCGCGGGTTCCGGTAAAACTCGTGTTATCACCAAt                                                                >  1:271900‑M1/74‑251 (MQ=255)
                                                                                                                                                                               tCTAATGGATTCACGATGAACTCCGATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattg                                                                                                                                           >  2:187661‑M1/1‑77 (MQ=255)
                                                                                                                                                                               tCTAATGGATTCACGATGAACTCCGATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattg                                                                                                                                           <  1:187661‑M1/175‑99 (MQ=255)
                                                                                                                                                                                  atatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCCCTGCCTGGTGCTGGCGGGCGCGGGTTCCGGTAAAACTCGTGTTCTCACCAATaaa                                                             <  1:278549‑M1/181‑1 (MQ=255)
                                                                                                                                                                                       aTTCACGATGAACTCCGATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccggggatga                                                       <  1:56581‑M1/251‑183 (MQ=255)
                                                                                                                                                                                       aTTCACGATGAACTCCGATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccggggatga                                                       <  2:264438‑M1/251‑183 (MQ=255)
                                                                                                                                                                                        gcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCCCTGCCTGGTGCTGGCGGGCGCGGGTTCCGGTAAAACTCGTGTTATCACCAATAAAATCGccc                                                      >  2:49250‑M1/64‑251 (MQ=255)
                                                                                                                                                                                             agcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCCCTGCCTGGTGCTGGCGGGCGCGGGGTCCGGGAAAAATCGTGTTTTTACCAATAAAATCGCCCCTCTg                                                 <  1:110137‑M1/193‑1 (MQ=255)
                                                                                                                                                                                             agcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCCCTGCCTGGTGCTGGCGGACGCGGGGTACGGGAAAAACCGCGTTATCACCAATAAAAACGCCCATCTg                                                 <  1:203984‑M1/193‑1 (MQ=255)
                                                                                                                                                                                             agcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAACCCTCCCCCCGTTCGAAGATTGAGCAACACGCCTATGCGTCTAACCCCCGGTCAACACCAAGCTGCCGAATTCGTTACCGGCCCCGGCCTGGTGCTGGCGGGCGCGGGTTCCGGTAAAACTCGTGTTATCCCCAATAAAATCGCCAATCTg                                                 >  2:11214‑M1/59‑251 (MQ=255)
                                                                                                                                                                                               tGAACTCCGATTTCGGTCTTCTCTCTCTGATTTCAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgcaccacaccggaaaagatcgcaattgttcagcagagctttgaaccggggatgaaggtctcc                                               >  2:203859‑M1/1‑61 (MQ=255)
                                                                                                                                                                                               ggggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCCCTGCCTGGTGCTGGCGGGCGCGGGTTCCGGTAAAACTCGTGTTATCACCAATAAAATCGCCCATCTGAt                                               >  2:110137‑M1/57‑251 (MQ=255)
                                                                                                                                                                                                   cTCCGATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccggggatgacggtctccctcg                                           >  1:230370‑M1/1‑57 (MQ=255)
                                                                                                                                                                                                       taatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTCAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCCCTGCCTGGTGCTGGCGGGCGCGGGTTCCGGGAAAAATCGTGTTATCACCAATAAAATCGCCCATCTGATCCgcggtt                                       <  1:95930‑M1/203‑1 (MQ=255)
                                                                                                                                                                                                        aatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCCCTGCCTGGTGCTGGCGGGCGCGGGTTCCGGTAAAACTCGTGTTATCACCAATAAAATCGCCCATCTGATCCgcggtt                                       >  1:137332‑M1/48‑250 (MQ=255)
                                                                                                                                                                                                        aatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCCCTGCCTGGTGCTGGCGGGCGCGGGGTCCGGGAAAAATCGTGTTATCACCAATAAAATCGCCCATCTGATCCgcggttg                                      <  1:174059‑M1/204‑1 (MQ=255)
                                                                                                                                                                                                             gttaagtgataacagatgtctggaaatataggggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCCCTGCCTGGTGCTGGCGGGCGCGGGTTCCGGTAAAACTCGTGTTATCACCAATAAAATCGCCCATCtgatccccggtttcgggt                                 <  2:212799‑M1/209‑7 (MQ=255)
                                                                                                                                                                                                                       cgctgaGTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccggggaggacggtctccctcgttgcccggcaacatggtgta                       <  2:168928‑M1/249‑215 (MQ=255)
                                                                                                                                                                                                                         ctGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacgtcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccggggatgagggtctccctcgttgcccggcaacatggtgta                       <  1:161701‑M1/249‑215 (MQ=255)
                                                                                                                                                                                                                         ctGATTTAAACATCCGCAGCCAACCGGTTAGCGGCtagactggccccctgaaactccagaaaacccatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagctgattgctgtcttagggccggagaaacgcagtcggcgtaccacacaggaaaaactcgcaattgttaagcagcgctttgaaccggggatgacggtctccctcgttgcccggcaacatgggggagc                     >  2:143120‑M1/1‑35 (MQ=255)
                                                                                                                                                                                                                                cgggaaatataggggacaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCTCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTTGAAGTCGTGACCGGCCCCTGCCTGGTGCTGGCGGGCGCGGGTTCCGGTAAAACTCGTGTTATCACCAATAAAATCGCCCATCTGATCCGCGGTTGCGGTTATCAGGCGCGGCACATTg               >  2:99993‑M1/24‑250 (MQ=255)
                                                                                                                                                                                                                                      ccGCAGCCAACCGGTTAGCGGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggtgtagcagccagccagtt         <  1:104630‑M1/250‑229 (MQ=255)
                                                                                                                                                                                                                                            gggcaaatccaGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCCCTGCCTGGTGCTGGCGGGCGCGGGGTCCGGTAAAACTCGTGTTATCACCAATAAAATCGCCCATCTGATCCGCGGGTGCGGTTATCCGGCGCGGCACATTGCGGCGGGgaccct  <  1:182408‑M1/240‑3 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                               
CGGCCATCGTAATACGTCGTGCTGAACGGTCCATTTTGGCTAACAGGATAGTTACCAAAGTTGCATTCCAGTATTTCACCAACCTTAGGGCTGAAATTAATCGCCACGAGTAAACCTCTCCTTAGTAAACTCTGAAAAAGTAATAACACAACGTTACGACCCGATATTTTCTAAGTCTAATGGATTCACGATGAACTCCGATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAATCCTCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCCCTGCCTGGTGCTGGCGGGCGCGGGTTCCGGTAAAACTCGTGTTATCACCAATAAAATCGCCCATCTGATCCGCGGTTGCGGTTATCAGGCGCGGCACATTGCGGCGGTGACCTT  >  NC_000913/3960354‑3960840

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.