Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	3,960,601	IS2 (+) +5 bp	intergenic (‑788/‑72)	ppiC ← / → rep	peptidyl‑prolyl cis‑trans isomerase C/ATP‑dependent DNA helicase Rep

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3960601 =	0 (0.000)	42 (1.590)	39/488	0.0	100%	intergenic (‑788/‑76)	ppiC/rep	peptidyl‑prolyl cis‑trans isomerase C/ATP‑dependent DNA helicase Rep
	?	NC_000913	= 4499511	NA (NA)					noncoding (1331/1331 nt)	IS2	repeat region
*	?	NC_000913	= 3960605	0 (0.000)	38 (1.440)	35/488	0.1	100%	intergenic (‑792/‑72)	ppiC/rep	peptidyl‑prolyl cis‑trans isomerase C/ATP‑dependent DNA helicase Rep
	?	NC_000913	4498181 =	NA (NA)					noncoding (1/1331 nt)	IS2	repeat region

AAGGTCACCGCCGCAATGTGCCGCGCCTGATAACCGCAACCGCGGATCAGATGGGCGATTTTATTGGTGATAACACGAGTTTTACCGGAACCCGCGCCCGCCAGCACCAGGCAGGGGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3960840‑3960601 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGTTTTCACGAAGCTCTCTGCTATTCCGTTACTCTCCGGACTCCG  <  NC_000913/4499511‑4499267                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       agGGTCCCCGCCGCAATGTGCCGCGCCGGATAACCGCACCCGCGGATCAGATGGGCGATTTTATTGGTGATAACACGAGTTTTACCGGACCCCGCGCCCGCCAGCACCAGGCAGGGGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCC                                                                                                                                                                                                                                            <  1:182408/249‑1              CAATGTGCCGCGCCTGATAACCGCAACCGCGGATCAGATGGGCGATTTTATTGGTGATAACACGAGTTTTACCGGAACCCGCGCCCGCCAGCACCAGGCAGGGGCCGGTCACGACTTCAACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGAGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTGTCCCCTATATTTCCcg                                                                                                                                                                                                                                >  2:99993/1‑248                                acccgaAACCGGGGATCAGATGGGCGATTTTATTGGTGATAACACGAGTTTTACCGGAACCCGCGCCCGCCAGCACCAGGCAGGGGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAAC                                                                                                                                                                                                             <  2:212799/245‑1                                     CAACCGCGGATCAGATGGGCGATTTTATTGGTGATAACACGATTTTTCCCGGACCCCGCGCCCGCCAGCACCAGGCAGGGGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATT                                                                                                                                                                                                        <  1:174059/251‑1                                      AACCGCGGATCAGATGGGCGATTTTATTGGTGATAACACGATTTTTCCCGGAACCCGCGCCCGCCAGCACCAGGCAGGGGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTGAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTA                                                                                                                                                                                                       <  1:95930/251‑1                                      AACCGCGGATCAGATGGGCGATTTTATTGGTGATAACACGAGTTTTACCGGAACCCGCGCCCGCCAGCACCAGGCAGGGGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATT                                                                                                                                                                                                        >  1:137332/1‑250                                              ATCAGATGGGCGATTTTATTGGTGATAACACGAGTTTTACCGGAACCCGCGCCCGCCAGCACCAGGCAGGGGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCc                                                                                                                                                                                               >  2:110137/1‑250                                                CAGATTGGCGATTTTATTGGGGATAACACGAGTTTTACCGGAACCCGCGCCCGCCAGCACCAGGCCGGGGCCGGTAACGAATTCGGCAGCTTGGTGTTGACCGGGGGTTAGACGCATAGGCGTGTTGCTCAATCTTCGAACGGGGGGAGGGTTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCT                                                                                                                                                                                             >  2:11214/1‑251                                                CAGATGGGCGTTTTTATTGGTGATAACGCGGTTTTTCCCGTACCCCGCGTCCGCCAGCACCAGGCAGGGGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCT                                                                                                                                                                                             <  1:203984/251‑1                                                CAGAGGGGCGATTTTATTGGTAAAAACACGATTTTTCCCGGACCCCGCGCCCGCCAGCACCAGGCAGGGGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCT                                                                                                                                                                                             <  1:110137/251‑1                                                     GGGCGATTTTATTGGTGATAACACGAGTTTTACCGGAACCCGCGCCCGCCAGCACCAGGCAGGGGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGC                                                                                                                                                                                        >  2:49250/1‑251                                                            TTTATTGGTGAGAACACGAGTTTTACCGGAACCCGCGCCCGCCAGCACCAGGCAGGGGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATAT                                                                                                                                                                                  <  1:278549/250‑1                                                               ATTGGTGATAACACGAGTTTTACCGGAACCCGCGCCCGCCAGCACCACCCAAGCGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGATTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCC                                                                                                                                                                              >  1:271900/1‑251                                                                       TAACACGAGTTTTACCGGAACCCGCGCCCGCCAGCACCAGGCAGGGGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCG                                                                                                                                                                        >  2:85628/1‑249                                                                        AACAGGAGTTTTACCGGAACCCGCGCCCGCCAGCACCAGGCAGGGGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAG                                                                                                                                                                      <  2:215783/250‑1                                                                          CACGAGTTTTACCGGAACCCGCGCCCGCCAGCACCAGGCAGGGGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGA                                                                                                                                                                   <  1:49250/251‑1                                                                          CACGAGTTTTACCGGAACCCGCGCCCGCCAGCACCAGGCAGGGGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCG                                                                                                                                                                    >  2:194558/1‑250                                                                                TTTTACCGGAACCCGCGCCCGCCAGCACCAGGCAGGGGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCC                                                                                                                                                             >  1:1849/1‑251                                                                                   atCCGGAACCCGCGCCCGCCAGCACCAGTCAGAGGCCGGTAACGAATTCGACAGCATGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCAAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGTATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAG                                                                                                                                                           <  1:109870/248‑1                                                                                           CCCGCGCCCGCCAGCACCAGGCAGGGGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGCGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATG                                                                                                                                                  >  1:42221/1‑251                                                                                                                    GGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATGGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGTATTTGCCCCTATATTTCCAGACATCTGTGATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACGATGCGGATGCCATTCGTTATAATGCTCG                                                                                                                         <  2:238443/251‑1                                                                                                                        GGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGCTGCCATTCGTTATAATGCTCGAACG                                                                                                                     >  2:76167/1‑251                                                                                                                           AACGAATTCGACCGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACACGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAACACACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCc                                                                                                                  >  2:121675/1‑250                                                                                                                                  TCGACAGATTGTGGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAAGCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAA                                                                                                            <  2:181168/250‑1                                                                                                                                      CAGCTGGTTGTTGGCCGGGGTGTAGACGCATAGGTGTATGGCTCAATCTTCGAACGGGGAGAGGATGGTAGCAGAATCGCATTGGAATGTGACCGCGGGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACCTAACCCATTACAAGCCCGCTGCCGCGGATATTCCCGTGGCGGGCGATTACCCAGCGCACTATCCGGACGCCATTCGTTAGAATGCTCGAACGCCGCCGCAAGGgtc                                                                                                       <  2:40567/251‑4                                                                                                                                           TGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTG                                                                                                   <  1:95989/250‑1                                                                                                                                                            TAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGTTTCTTTGCTGCCGTTAACCCGTCT                                                                                  <  1:61055/250‑1                                                                                                                                                                cgtATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTT                                                                             <  1:56577/248‑1                                                                                                                                                                  CATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGTTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGG                                                                           <  1:194558/251‑1                                                                                                                                                                     AGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCAAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCc                                                                        >  2:143528/1‑250                                                                                                                                                                           ATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATAC                                                                  >  1:265843/1‑251                                                                                                                                                                                        CGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACG                                                     >  1:1214/1‑251                                                                                                                                                                                                GGGAGGATTGTAGCAGAATCGCATTTGAATGTGCCCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATag                                             <  2:170897/251‑3                                                                                                                                                                                                GGGAGGATTGTAGCAGAATCGCATTTGAATGTGACAGCGCGTAAGCCGCAGGATTTGACCCTATATTTCCAGACATCTGTTATCCCTTAACCCATTACAAGCCCGCTGCCGCAGATATTCACGTGGCGCGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAAAGCCTCTGCAAGGTTCTTTGCTGCAGTTAACCCGTCTGGATTGGGCATGATACTGATGTAGTCACGCTTTATCG                                             >  1:154948/1‑251                                                                                                                                                                                                 GGAGGATTGTAGCAGAATCGCAGTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGT                                            <  2:16097/251‑1                                                                                                                                                                                                    GGATTGTAGCAGAATCGCATTTGAATGTGCCCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTATCCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGTTTT                                         <  1:254176/251‑1                                                                                                                                                                                                    GGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCCTGATACTGATGTAGTCACGCTTTATCGTTTT                                         >  1:100465/1‑251                                                                                                                                                                                                       TTGTAGCAGAAACGCATTTGAATGTGCCCGCGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTCAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAAACCTGCGCACTATGCGGATGCCATTCGTTATAATGATCGAACGCCTCTGCAAGGTTCTTTACTGCCGTTAACCCGTATGGTTTGGGCATGATACTGTTGTAGTCACGCTTTATCGTTTTCAC                                      >  2:195477/1‑251                                                                                                                                                                                                             CAGAATGGCATTTGCATGTGACCGAGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCACCGCCCTATGCGGATGCCATTCGTTATAATGCTCGAACGCATCTGCAAGGTTATTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGATTTATCGTTTTCACGAAGCT                                >  2:213023/1‑251                                                                                                                                                                                                                                     CGTGTAAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGCACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGTTTTCACGAAGCTCTCTGCTATTCCGTTACTCTCCGG        >  1:43085/1‑251                                                                                                                                                                                                                                          AAGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGTTTTCACGAAGCTCTCTGCTATTCCGTTACTCTCCGGACTCC   <  1:85628/251‑1                                                                                                                                                                                                                                           AGCCGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGTTTTCACGAAGCTCTCTGCTATTCCGTTACTCTCCGGACTCCG  >  2:102638/1‑251                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAGGTCACCGCCGCAATGTGCCGCGCCTGATAACCGCAACCGCGGATCAGATGGGCGATTTTATTGGTGATAACACGAGTTTTACCGGAACCCGCGCCCGCCAGCACCAGGCAGGGGCCGGTAACGAATTCGACAGCTTGTTGTTGGCCGGGGTTTAGACGCATAGGTGTATTGCTCAATCTTCGAACGGGGGGAGGATTGTAGCAGAATCGCATTTGAATGTGACCGCGTGTAAGCCGCt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3960840‑3960601 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGTTTTCACGAAGCTCTCTGCTATTCCGTTACTCTCCGGACTCCG  <  NC_000913/4499511‑4499267

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.