| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,913,392 | IS2 (–) +5 bp | coding (256‑260/2235 nt) | relA ← | GDP/GTP pyrophosphokinase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2913392 = | 0 (0.000) | 11 (0.410) | 11/490 | 0.9 | 100% | coding (260/2235 nt) | relA | GDP/GTP pyrophosphokinase |
| ? | NC_000913 | = 2997691 | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 2913396 | 0 (0.000) | 19 (0.720) | 18/490 | 0.4 | 100% | coding (256/2235 nt) | relA | GDP/GTP pyrophosphokinase |
| ? | NC_000913 | 2996361 = | NA (NA) | noncoding (1331/1331 nt) | IS2 | repeat region | |||||
TCCGGCGCATCTTTTACTTCGCGCAGATGAGCAATACGCTCCGCCAGTTTGATGACTACGCAGCGAAAATCATCGACCATCGCCAATAACATCCGGCGAACGTTATCGACCTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACTTCTGGCTGGTAATACCCAGACTTGCGATCCATTTTTCCGGATCAAATTCACCAGCCTTATTGATATGTGCACTTCTTACCG > NC_000913/2913149‑2913644 | cccGGCGCATCTTTTACTTCGCGCATATGAGCAATACGCTCCGCCAGTTTGATGACTACGCAGCGAAAATCATCGACCATCGCCAATAACATCCGGCGAACGTTATCGACCTTTTCGGAGGAAACAGAATCAGTGTGGGTCGCTTGCAGCTGGCGGAGCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATc < 1:41219/247‑1 (MQ=255) cGGCGCATCTTTTACTTCGCGCAGATGCGCACTACGCTCCGCCCGTTTGATGACTACGCCGCGAAAATCATCGACCATCGCCAATCACATCCGGCGACAGTTATCGACCTGTTCGCAGGACACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGTATCGCCGCCATATCACGCACGCCGTGAATAAGGTTCACGACCGACTTACCGACGCTCTCACGCAGCACATATTCGCTTCCTACGTTGGCATCtggat > 2:236757‑M1/1‑246 (MQ=255) acgccagagaaataactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGcc < 1:249670‑M1/9‑1 (MQ=255) ccagagaaataactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCagag > 1:218751‑M1/239‑251 (MQ=255) ggctggctgctacaccatgttgccgggcaacgagggagaccttcatccccggttcaaatctctgctgaacaattgcgatcttttcctgtgtggtgcgccgtcggcttttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaacttgtattaagactatcacttatttaagtgatattggttttcgggagattcagggtgccgttctaGCTTCCGCCAGAGGGAAAAGCAGcgcc > 1:18106‑M1/225‑251 (MQ=255) gctggctgctacaccatgttgccgggcaacgaaggagcccgtcctcccaggatcaacgctctgctgaacaattgcgatcttttcccgtgcggtacgccgtccgcgtttctcccgccctacgccatcaatcatctgttctccaatgactcgtctcaaacctagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGcgccg < 1:275365‑M1/28‑1 (MQ=255) gcgcAGATTAGCAATCCGCTCCGCCAGTTTGATGACTCCGCAGCGAAAATCATAGACCATCCCCAATAACATCCGGCGAACGTTCTCGACCTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATCTCACGCACGCCGTGAATAAGGTTACCGACCGACTTCCCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctctatttccac > 2:278466‑M1/1‑228 (MQ=255) aGCAATACGCTCCGCCAGTTTGATGACTACGCAGCGAAAATCATCGACCATCGCCAATAACATCCGGCGAACGTTATCGACCTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgtt > 1:143326‑M1/1‑219 (MQ=255) aaacACCCGGCGAACGTTACCGCCCTGTCCGGAGGAAACAGAATCATTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGTCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacc < 1:129241‑M1/250‑90 (MQ=255) gaccgtgctcgacgtgtTGGGAGGAAACAGAATCAGTGGGGGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactat < 2:82406‑M1/243‑101 (MQ=255) ggaAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatg > 1:146567‑M1/1‑129 (MQ=255) gcgtttctccggcccaaagccatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTg > 2:148388‑M1/122‑249 (MQ=255) aGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcacgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctc > 2:58073‑M1/1‑117 (MQ=255) caatcatctgttctccaatgactagtctaaaaactagtattaagactctcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTc > 2:237813‑M1/99‑250 (MQ=255) gggcggcccgccgccatatcctGCACGCCGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatgtccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgctgatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgcc < 2:97980‑M1/243‑154 (MQ=255) ccaatgaagattctaaaaactagtattaagattatcacttatttaagggatatttgttgtctggagattcagggtgccaggctaGCATCCGACCGAGGGTAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATCCTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTca > 2:128606‑M1/85‑249 (MQ=255) actagtctaaatactaggattaagtctatcacttatttaagtgatagtggtggtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACt > 2:148639‑M1/79‑250 (MQ=255) ccGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgat > 2:259981‑M1/1‑71 (MQ=255) cGTGAAAAAGGTTAACGACCGACTTACCGACGATCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttatactgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatac > 1:221406‑M1/1‑70 (MQ=255) gAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctagaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactg < 2:146567‑M1/250‑184 (MQ=255) aaCGACCGACTTCCCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcacgatgcggatgccattcgttataattctcgtacgcctctgcaaggttctttgctgccgttaacccttctggtttgggcatgatacttatgtagtcacg < 2:170210‑M1/251‑195 (MQ=255) aaCGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgccgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacg < 2:170219‑M1/251‑195 (MQ=255) cgacTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttat < 2:221406‑M1/251‑201 (MQ=255) agtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGACCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACTTCTGGCTGGAAATCCCCAGACTTGCGAGCCATTTTTCCgg < 2:154137‑M1/212‑1 (MQ=255) gACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcac > 1:84653‑M1/1‑42 (MQ=255) gcagcaCATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccatacatctgttatcacttaacccattacaagcccgcttccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttagcccgtctggtttgggcatgatactgatgtaggcacgctttatcgttttgacgaagctctctg < 2:249774‑M1/251‑221 (MQ=255) ggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGTATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACTTCTGGCTGGTAATACCCAGACTTGCGATCCATTTTTCCGGATCAAATTCACCAGCCt > 1:236260‑M1/23‑251 (MQ=255) gCTGACTACGTTGTCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatatacccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgttact < 2:143326‑M1/251‑234 (MQ=255) tACGTTGGCATCtggatttgcccctatatttccagacatctgttataacttaacccattacaagcccgctgccgcagatattcccgtggcgcgcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctgggttggacatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgttactctccgg > 2:172348‑M1/1‑12 (MQ=255) gtcgaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGGCGAGAGGATCTCCACCATCTCAACACCACGCCCCAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACTTCTGGCTGTTAATACCCAGACTTGCGATCCATTTTTCCGGAGCAAATTCACCAGCCTTATTGATATGTGCActt > 2:46831‑M1/6‑251 (MQ=255) ggCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgttactctccggactcc < 2:84653‑M1/250‑245 (MQ=255) aTCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGCCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACTTCTGGCTGGTAATACCCAGACTTGCGATCCATTTTTCCGGATCAAATTCACCAGCCTTATTGATATGTGCACTTCTTACCg < 1:102979/251‑1 (MQ=255) | TCCGGCGCATCTTTTACTTCGCGCAGATGAGCAATACGCTCCGCCAGTTTGATGACTACGCAGCGAAAATCATCGACCATCGCCAATAACATCCGGCGAACGTTATCGACCTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACTTCTGGCTGGTAATACCCAGACTTGCGATCCATTTTTCCGGATCAAATTCACCAGCCTTATTGATATGTGCACTTCTTACCG > NC_000913/2913149‑2913644 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |