Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	458,790	IS186 (+) +6 bp :: Δ1 bp	intergenic (+90/‑93)	clpX → / → lon	ATP‑dependent Clp protease ATP‑binding subunit ClpX/Lon protease

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	15387 =	NA (NA)	33 (0.820)	31/482	0.3	97.0%	noncoding (1/1345 nt)	IS186	repeat region
	?	NC_000913	= 458795	1 (0.030)					intergenic (+95/‑93)	clpX/lon	ATP‑dependent Clp protease ATP‑binding subunit ClpX/Lon protease
*	?	NC_000913	458790 =	1 (0.030)	34 (0.840)	32/484	0.3	97.1%	intergenic (+90/‑98)	clpX/lon	ATP‑dependent Clp protease ATP‑binding subunit ClpX/Lon protease
	?	NC_000913	= 609350	NA (NA)					noncoding (1344/1345 nt)	IS186	repeat region

ACATAATCCAGCCATCGCTGGATTTCCCCCCCAGAAGTGCCGGATCCGAAAAGAAGAACTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACCTGCTGTTTATTCCAGCTAATTATCTGATAGTCCAGAAAACCTGCATCAGTTTGG  >  NC_000913/609116‑609600                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                            acATAATCCAGCCATCGCTGGATTTCCCCCCCAGAAGTGCCGGATCCGAAAAGAAGAACTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTGTCCCTGACAGCCTACAAGACGCAATTGAAGAACGCGAGGCATCGTCGTAACGAGGCAGCGAGGCGTCGCATTCTTCAGATGTGTCAACCTGTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCatat                                                                                                                                                                                                                                            <  1:58981/251‑1 (MQ=11)     aaTCCAGCCATCGCTGGATTTCCCCCCCAGAAGTGCCGGATCCGAAAAGAAGAACTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCgg                                                                                                                                                                                                                                        >  1:83084/1‑251 (MQ=38)      aTCCAGCCATCGCTGGATTTCCCCCCCAGAAGTGCCGGATACGAAAAGAAGAACTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACATGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACTCGAGTCATCGTCTTAACGAGGCACCGAGGCGTAGCATTCTTCAGATGGTTCAACCCTTATGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGt                                                                                                                                                                                                                                       <  1:377117/251‑1 (MQ=255)          aGCCATCGCTGGATTTCCCCCCCAGAAGTGCCGGATCCGAAAAGACGAACTAACTCGTTGTGGAGAATCACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGCGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTCGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTgtc                                                                                                                                                                                                                                   >  2:200193/1‑251 (MQ=255)          aGCCATCGCTGGATTTCCCCCCCAGAAGTGCCGGATCCGAAAAGAAGAACTAACTCGTTGTGGAGAATAAAAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTCCAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTgtc                                                                                                                                                                                                                                   >  1:270706/1‑251 (MQ=255)                              cccAGAAGGGCCGGATCCGAAAAGAAGAACTAACTCGGTGTGGAGAATAACCAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTGGTCAGGTCAGGATGGTAAGGCAc                                                                                                                                                                                                               <  2:379801/251‑1 (MQ=255)                                        ccGGATCCGAAAAGAAGAACTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTaca                                                                                                                                                                                                     <  1:363760/251‑1 (MQ=255)                                        ccGGATCCGAAAAGAAGAACTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTAATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTac                                                                                                                                                                                                      >  2:90076/1‑250 (MQ=255)                                             tCCGAAAAGGAGAACTACCTCGTTGTGGAGAATACCACAATTGGTCATCTGGAGCTTACAGGGGGCCATTCGTGGGACAGTATCACTGACAGCCTACAAAAAGCAATTGAAGAACGCGAGGCATCGTCTTACCGAGGCACCGAGGCGTCGCATTATTCCGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATC‑TCCGCATATCCGGTTGTCGGGTCAGGATGGTAAGGCACCTGCTTTACACTTTc                                                                                                                                                                                                >  2:356646/1‑251 (MQ=17)                                                      aagaaCTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGt                                                                                                                                                                                       >  1:57551/1‑251 (MQ=255)                                                      aagaaCTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGt                                                                                                                                                                                       <  1:327721/251‑1 (MQ=255)                                                             aactCGTTTTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCATCCCTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTg                                                                                                                                                                                  <  1:374211/249‑1 (MQ=255)                                                                       ggAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGc                                                                                                                                                                      >  1:244561/1‑251 (MQ=255)                                                                            aTAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCGTAACGAGGCACCGAGGCGTCGCATTCTTCGGATGGTTCAACCCTTAAGTTAGCGCTTAGGGGAGTAAGC‑CCCGCAGATCCGGTTGTCGGGTCAGGATGGTAAGGCACCTGCATTACACTTTGGCCCGAGGTTATTTATGGCTGCGGTCGAATc                                                                                                                                                                 <  2:53787/251‑1 (MQ=17)                                                                               aCAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTa                                                                                                                                                              <  1:90076/251‑1 (MQ=255)                                                                                 aaaaaTGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTAcc                                                                                                                                                            >  1:380090/1‑251 (MQ=255)                                                                                               ggAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCGTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTc                                                                                                                                                  <  1:430129/247‑1 (MQ=255)                                                                                                          gTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGCAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTgg                                                                                                                                   >  2:192121/1‑251 (MQ=255)                                                                                                             gCCATTCGTGGGACAGTATCCCTGACAGCCTACCAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGCAAGGCACCTGCTTTACACTTTCGCCCGCGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGcac                                                                                                                                >  1:12874/1‑251 (MQ=255)                                                                                                             gCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGcac                                                                                                                                >  1:12859/1‑251 (MQ=255)                                                                                                                  tCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCg                                                                                                                            <  1:250319/250‑1 (MQ=255)                                                                                                                          cAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACt                                                                                                                    >  1:203843/1‑250 (MQ=255)                                                                                                                           aGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTAt                                                                                                                  >  1:53069/1‑251 (MQ=255)                                                                                                                              aTCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGGCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTagct                                                                                                                <  2:220573/250‑4 (MQ=255)                                                                                                                                   tGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCCTTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTAtcttttctt                                                                                                          >  1:366720/1‑251 (MQ=255)                                                                                                                                       aGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGACGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTCGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTAt                                                                                                      >  2:297875/1‑251 (MQ=255)                                                                                                                                         ccTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCt                                                                                                    >  2:232444/1‑251 (MQ=255)                                                                                                                                          cTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTg                                                                                                   >  1:141077/1‑251 (MQ=255)                                                                                                                                            aCAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTg                                                                                                   <  1:167835/249‑1 (MQ=255)                                                                                                                                                  cGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAATGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCTTTATGACTATCTTTTCTTTTATCTGCCAGTGca                                                                                           <  2:240662/251‑1 (MQ=255)                                                                                                                                                      aatGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTACGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGc                                                                                       >  2:327842/3‑251 (MQ=255)                                                                                                                                                         gaagaaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCTTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCTAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACATCGTTATGAGTATCTTTTCTTTTATCTGCCAGTGCACAGCaa                                                                                     <  1:436823/250‑1 (MQ=255)                                                                                                                                                               cgcgAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACAtctc                                                                              <  1:232444/251‑1 (MQ=255)                                                                                                                                                                  gAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTGAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGGCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCAtt                                                                           <  1:200193/251‑1 (MQ=255)                                                                                                                                                                      catcggattAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTGTCGCCCGTGGTCAGTTATGGCTGCGGGCGAAGCGTGCTAAATGTTGTCAATTAATTGTGTTGGCGCAGCTTTATGACTATCGTTTCTTTTATGTGCCAGTGCACAGCAAACATCTCATTCTCa                                                                       <  1:404198/244‑1 (MQ=37)                                                                                                                                                                                                   cATTCTTCAGATGGTTCAACCCGTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTCGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCATATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGTCTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCACATGCTCACGATGAATGATGACCTGCTGTTTATTCCa                                          <  1:356646/251‑1 (MQ=255)                                                                                                                                                                                                         tcAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATGCTCACGATGAATGATGACCTGCTGTTTATTCCAGCt                                       <  1:153609/248‑1 (MQ=255)                                                                                                                                                                                                                        cTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCa                                                                                                                                                 >  1:85612/1‑127 (MQ=255)                                                                                                                                                                                                                        cTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCa                                                                                                                                                 <  2:85612/127‑1 (MQ=255)                                                                                                                                                                                                                              ttcgcgcTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACCTGCTGTTTATTCCAGCTAATTATCTGATAGTCCAGAAAAcc               >  2:276578/4‑251 (MQ=255)                                                                                                                                                                                                                                     ttATGGGAGTAATC‑CCCGCATATCCGGTTGTAAGGTCAGGATGGTAAGGCACCTACTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATAGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTATCACGATGAATGATGACCTGCTGTTTATACCAGCTAATTATCTGATAGTCCAGAAAACCTGCATc         >  1:187067/1‑250 (MQ=255)                                                                                                                                                                                                                                           gAGTAATCTCCCG‑ATATCCGGTTGTCAGGTCAGGATTGTAAGGTACCTGCTTTACACTTTCGCCCGTTGACAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATTACTATCTTTTCGCTTAGCTGCCAGTGCACATCAAACATTTCATTCTCACGATGAATGATGACCTGCTGTTTAGTCCAGCTAATTATCTGATAGGCCAGTAATCCTGCATCAGTTTgg  <  2:270706/251‑1 (MQ=255)                                                                                                                                                                                                                                           gAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACCTGCTGTTTATTCCAGCTAATTATCTGATAGTCCAGAAAACCTGCATCAGTTTgg  >  2:14937/1‑251 (MQ=255)                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                            ACATAATCCAGCCATCGCTGGATTTCCCCCCCAGAAGTGCCGGATCCGAAAAGAAGAACTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATC‑CCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACCTGCTGTTTATTCCAGCTAATTATCTGATAGTCCAGAAAACCTGCATCAGTTTGG  >  NC_000913/609116‑609600

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.