| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,468,298 | IS3 (+) +3 bp | coding (85‑87/921 nt) | yfdH → | bactoprenol glucosyl transferase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2170171 = | NA (NA) | 27 (0.630) | 25/492 | 0.5 | 100% | noncoding (1/1258 nt) | IS3 | repeat region |
| ? | NC_000913 | = 2468300 | 0 (0.000) | coding (87/921 nt) | yfdH | bactoprenol glucosyl transferase | |||||
| * | ? | NC_000913 | = 2171428 | NA (NA) | 31 (0.730) | 28/490 | 0.4 | 100% | noncoding (1258/1258 nt) | IS3 | repeat region |
| ? | NC_000913 | 2468298 = | 0 (0.000) | coding (85/921 nt) | yfdH | bactoprenol glucosyl transferase | |||||
AAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATA > NC_000913/2171191‑2171645 | aaaaGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGCAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGt > 2:25996/1‑251 (MQ=25) ggTTGATGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCAGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCCGTCCGGAACAATTTGAAAACAAGAAACTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGAGCAGTCATCCCTTCGTGGAt > 2:150234/1‑251 (MQ=255) tGCGTGAAAAGCTTCTTTCATTCGCTGAAAGTGGAATGAATCCATGGAGGACACTTTCTCAGCCGGGAAATAATGCGGGCAACGGAGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGACTCAATCCGGAACAATTTGAAAACAAGAACCTAGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCATTCGGGGATCATTTTGACTGCAGCCTgcgg > 2:74633/1‑250 (MQ=14) aaaGCGTCTTTCATTCACTGAAAGTGGAATGTATCCATGGAGAACACTTTATCCGCCGGGAAATAATGCGGGCAGCGGTGTTTAATTATATCGAATGTGATTAAAATCGGTGGCGGCGGCACAGTTGGAGTGGCGTCCTCCGCCCGGTACAATTTGAAAACAAGAACCCAGCTTAGGCCTGTGTCCATAATACGTGGGTAAGATCAGACATCCCTTAGTGCAGCCTTTTGACTGACGCCTGAGCTGTTCTg > 2:239808/1‑251 (MQ=11) ttCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGgcgcgc > 1:306015/1‑251 (MQ=255) cGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGGGTCCATATTACGTGGGTAGGATCAGTCATCCCGTCGTGGAGCAATTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTg < 1:150234/251‑1 (MQ=255) tGAAAGTGGAAGGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGGGTTTAATTATATCGCATGTGATTCCAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGACTCAGTCCGGAACCATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCAATATTACCTCGGTAGGGTCAGTCATCCCTTAGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCg > 2:200988/1‑251 (MQ=18) gAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGGCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGaaa < 1:68627/251‑1 (MQ=255) aTGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATc < 2:320198/251‑1 (MQ=255) aaCACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCGTTAAACCCg < 2:341282/251‑1 (MQ=255) cGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGGACAATTTTAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTAAGTGGGGAGGATCAGTCATCCCTTCGTGGAACATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGTAATCGCTCTTTAAACCCGACTTCCTGGGtctc > 1:107810/1‑251 (MQ=255) ggCAACGGTGTTTAATTATATCGAAGGTGAGTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTGCCGGGGTCTCGGTTTCACTATTAc < 2:30316/251‑1 (MQ=255) aaCGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCACTATTAcc > 2:169579/1‑249 (MQ=255) cGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAgcc > 1:140730/1‑249 (MQ=255) aaTTATATCGAATGGGATTACTATCGGTGGCGGCGGCACAGGTGGTGTGGCGGCCTCAGCCTGGAACAATTTGAAAACAAGAACCCCGCGTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGGGGATCATTTTGACTGCCGCCTGCTCTATTCTGTTTTTTGGCTAGCTGGCGAGCTGAAATCGATCTTTAAACCCGCCGTCCTGTGTCTCGGTTTCACTATTACCAGACATTAttt < 2:296420/250‑1 (MQ=21) tataTCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTAAAAACAAGAATCTCCCTTAGGGCTGTGTCCATATTACGTGGATAGGAGCAGTCATCCCTTCGTGGATCATTTTGACTGCCGGCTGCGCTATTCTGATTTTTGGCGGGCTGGCGAGCTGCAGTCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGCCATTAttttagc > 1:378946/1‑248 (MQ=25) aaTCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGGACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGCAAgcg > 2:215576/1‑251 (MQ=255) tagtgtGGCGGCCTCCGTCCGGAACAATTTGAAAACAAGAAACTCGCTTAGGCCTGTGTCCATCCTACGTGGGGAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTACGCTATTATGTCTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGCCTTCCTGGGGCTCGGTTTTACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAAAGCGGAACCACGCCATTTTGTTc > 2:247917/3‑251 (MQ=255) aaTTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCACCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTGGGCGCGCTGGCGAGCTGAAACCGCTCTTTAACCCCGACTTCCGGGGTCGCGGTTTCACTATTACCAGCCATTATTTGCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGAtt < 2:140730/251‑1 (MQ=39) aaGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCg > 1:216275/1‑250 (MQ=255) tAGGCTTGGGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTTAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCTCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATa < 1:26394/250‑1 (MQ=255) aGGATCTGTCATCCCTTCGGGGTTCATTGTGACGGCCGCCGGCGCTTTTCTTTTTTTTGGCGCGCGGGCGAGCTGAAATCGCTCTTTAACCCCGACTGCCTGGGTCTCTGTTTCACTAGTCCCAGACATTTTTTGCGCCGCTCCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGAt < 2:253684/201‑1 (MQ=255) aGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCATGCGATATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCACTATTCCCAGACATTATTTTCGCCGCACCGCCATGACAGCGCGTAACCACGCCTTTTTGTTCGCGAAAGCGCAAATCGGCACGGAt > 1:253684/1‑201 (MQ=255) | AAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATA > NC_000913/2171191‑2171645 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |