| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 275508 | 0 (0.000) | 29 (0.720) | 27/466 | 0.4 | 100% | coding (184/1404 nt) | mmuP | S‑methyl‑L‑methionine transporter |
| ? | NC_000913 | 372749 = | 0 (0.000) | coding (635/810 nt) | mhpD | 2‑hydroxypentadienoate hydratase | |||||
ATGGGTACTTCCGGCGCTGGAAGTGGTGGGGAGCCGCATTCGCGACTGGTCGATTCAGTTTGTCGATACCGTGGCAGATAACGCCTCCTGTGGGGTGTATGTCATCGGCGGTCCGGCGCAACGTCCGGCGGGGTTAGACCTGAAAAACTGCGCCATGAAGATGACGCGTAATAACGAAGAGGTTTCTAGCGGGCGCGGCAGCGAATGCCTGGGACATCCGCTTAATGCGGCCGTCTGGCTGGCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCAACATTGGTACCGATCTGATGATTAAAATTTTGCGTCA > NC_000913/372507‑372994 | aacgcggtataacaaaccttctttggatgtttagatgtccatacgtttagaaggttatatgcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCaaaa < 2:10865‑M2/9‑1 (MQ=255) ataacaaaccttctttggatgtttagatgtccatacgtttagaaggttatatgcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggactattttattggtgcggtggggggctgggtggcacgcaaaaagggcagg > 1:418853‑M2/235‑243 (MQ=255) aaaccttctttggatgtttagatgtccatacgtttagaaggttatatgcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaaagctgctggcccatcttatttgtgcgctgggggtctggctggCCCGCAAAAATGCCCGTCTggg > 1:265994‑M2/230‑251 (MQ=255) accttctatggatgtttcgatgtccatacgtttagaaggttatatgcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcggggacgctgacggcctatttgacttttgcgccggtgggctgggtggCACGCGAAAAGGCCACTCTCGGTg > 2:125381‑M2/228‑251 (MQ=255) gatgtccatacgtttagaaggttatatgcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggagtattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCTCACCGgag < 2:222975‑M2/42‑1 (MQ=255) tagaaggttatatgcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTAc < 2:310149‑M2/55‑1 (MQ=255) aaggttatatgcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgggctgggggtctggctggCCCGCAAAATGGCCAGTCTGGGTGGACCGCTGCGCACCGGGGATATCAtttttaaccgg > 1:413101‑M2/193‑246 (MQ=255) ccacacaacaaaatgctccacttaagcgcacaatgaacacgcggcacctgattatgctttccttgggctgcgtgattggcacaggagtattcttcaataccgggtacatcatttccaccccggtagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGAtg < 2:416535‑M2/74‑1 (MQ=255) gcgccactgaagcgcacaatgaaaacgcttcacctgattatgctttccttgggcggcgtgattggcacaggattattctgcaagaccgggtacatcatttccaccactggagcggcgggaacgcggctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGc < 2:154829‑M2/88‑1 (MQ=255) cgccactgaagcgcacaatgaaaacgcgtcacctgattttgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgctctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCg < 1:206650‑M2/89‑1 (MQ=255) gccactgaagcgcacaatgaaaactcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatcggattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTGCCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCgg < 2:390182‑M2/90‑1 (MQ=255) gaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggttgtctggctggCACGCAAAATGGCCAGGCTGGGTGAACCGCTGCGCACCGTAGATATCATTCTTACCTGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATc < 1:164123‑M2/96‑1 (MQ=255) gcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggtgtgattggcacaggattattcttcaataccgggtacatcatttccaccgctggagcggcgggaactctgctggcctatctgattggtgcgctggtggtctggctggCTCGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCTATGGTGGCGGTGAATGCTGGGGATCGtt < 2:31093‑M2/99‑1 (MQ=255) gattattcttgccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCTCCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATa < 2:346866‑M2/122‑1 (MQ=255) ttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGtt < 2:96769‑M2/131‑1 (MQ=255) ccttgggcggcgtgatgggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAATCCCATATTGAAGGCATAGGTTCAGTtgct < 2:413101‑M2/134‑1 (MQ=255) aataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCt < 1:243630‑M2/169‑1 (MQ=255) gggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCg < 2:12910‑M2/93‑1 (MQ=255) ccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCg < 1:377232‑M2/191‑1 (MQ=255) ccacgggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCg < 1:133910‑M2/191‑1 (MQ=255) cgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGGGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGtt > 2:123800‑M2/49‑251 (MQ=255) cgggaacgctgccggcctatctgattggtgcgctggtggtctggctgaCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGCTGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGCCATTTTCAAGCGCAGCCCCCAAAAGAAGGCTGTCAATAGTAAGCGTAAAGTCGCCCTTTTCGGtt > 2:170752‑M2/49‑251 (MQ=255) gaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATATGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAATGAAGTCTGTCATGGGTAAGCGTAAAGTCGCCATTATCGGTTCTg < 2:266030‑M2/206‑1 (MQ=255) acgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGc > 1:83057‑M2/44‑251 (MQ=255) atggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGGGAATGCAGGCGAGCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCTTAAGGTCGCCATTATCGGTTCTGGCAACAtt < 1:233157‑M2/214‑1 (MQ=255) gattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCAACATTGGTACCGa < 1:110587‑M2/222‑1 (MQ=255) gattggtgcgcgggtggTCTGGCTTGCGCGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATGCGTACCGTGGCATTAGGTCCGATTGTGTCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGTATATGTTCAGGTTCTTCGTCATTGTCAAGCGCGGTCCCTAAAGGAAGTCTTTCATTTGTAAGCGTAAAGTTTTCATTATCGTTTCTGGCAACATTGGTACCGAt < 1:220008/233‑1 (MQ=255) ggtgcgcgggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTGACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTGTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGACGCGATTATCGGTTCTGGCAACATTGGTACCGATCtgat < 2:126937‑M2/228‑1 (MQ=255) gcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATAGCATTCTTGCCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATAGTGAAGGCATAGGTTCAGTTGCGGCGACATTTTCAAGCGCAGCCCCAAAAGGGAGTCTGTCATGAGTAAGCGTAAATTCGCCATTATCGGTTCTGGCAACATTGGTACCGATCTGATGAtt < 1:423559‑M2/232‑1 (MQ=255) tggtggtcaggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCGGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGAATAGGTTCAGTTGCTGGGAACTTTTCAAGCGCAGCCCCAAAAGAAAGTCTGTCATGAGTAAGCGTAAAGTAGCCATTATCGGTTCTGGCAACATTGGTACCGATCTGATGAttata > 2:141289‑M2/16‑248 (MQ=255) gctggcACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCAACATTGGTACCGATCTGATGATTAAAATTTTGCGTCa < 1:106671/251‑1 (MQ=255) | ATGGGTACTTCCGGCGCTGGAAGTGGTGGGGAGCCGCATTCGCGACTGGTCGATTCAGTTTGTCGATACCGTGGCAGATAACGCCTCCTGTGGGGTGTATGTCATCGGCGGTCCGGCGCAACGTCCGGCGGGGTTAGACCTGAAAAACTGCGCCATGAAGATGACGCGTAATAACGAAGAGGTTTCTAGCGGGCGCGGCAGCGAATGCCTGGGACATCCGCTTAATGCGGCCGTCTGGCTGGCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCAACATTGGTACCGATCTGATGATTAAAATTTTGCGTCA > NC_000913/372507‑372994 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |