New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 364355	0 (0.000)	9 (0.310) +CGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATT	8/400	1.3	73.1%	coding (1951/3075 nt)	lacZ	beta‑galactosidase
	?	NC_000913	= 4171921	8 (0.230)					intergenic (+165/‑136)	rrfB/murB	5S ribosomal RNA/UDP‑N‑acetylenolpyruvoylglucosamine reductase

CGGGGAGCGTCACACTGAGGTTTTCCGCCAGACGCCACTGCTGCCAGGCGCTGATGTGCCCGGCTTCTGACCATGCGGTCGCGTTCGGTTGCACTACGCGTACTGTGAGCCAGAGTTGCCCGGCGCTCTCCGGCTGCGGTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCGTTATCGCTATGACGGAACAGGTATTCGCTGGTCACTTCGATGGTTTGCCCGGATAAACGGAACTGGAAAAACTGCTGCTGGTGTTTTGCTTCCGTCAGCGCTGGATGCGGCGTGCGGTCGGCAAAGACCAGACCGTTCATACAGAACTGGCGATCGTTCGGCGTATCGCCAAAATCACCGCCGTAAGCCGACCA  >  NC_000913/364109‑364550                                                                                                                                                                                                                                                       |                                                                                                                                                                                                    cggGGAGCGTCACACTGAGGTTTTCCGCCAGACGCCACTGCTGCCAGGCGCTGATGTGCCCGGCTTCTGACCATGGGGTCGCGTTCGGTTGCACTACGCGTACTGTGAGCCAGAGTTGCCCGGCGCTCTCCGGCTGCGGTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCAGCCAGCGCCACCATCCAGTGCAGGAGCTCcgat                                                                                                                                                                                                 <  1:159341‑M1/251‑5 (MQ=255)       gCGTCACACTGAGGTTTGCCGCCAGACGCCACGGCTGCCAGGCGCTGATGTGCCCGGCTTCTGACCATGCGGTCGCGTTCGGTTGCGCTACGCGTACTGTGAGCCAGAGTTGCCCGGCGCTCTCCGGCTGCGGTAGTTCAGGCAGTTCAATCAACTGTTGACCTTGTGGAGCGACATCCAGAGGCACGGCACCGCGTGCCAGCGGCTTACCATCCAGCGCCACCAGCCAGTGCAGGAGCTCcgatgataag                                                                                                                                                                                           <  2:352947‑M1/251‑11 (MQ=255)           cacaCTGAGGTTGTCCGCCAGACGCCACTGCTGCCAGGCGCTGATGTTCCCGGCTTCTGACCATGCGGTCGCGTTCGGTTGCCCTACGCGTACTGTGAGCCAGAGTTGCCCGGCGCTCTCCGGCTGCGGTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataagctgt                                                                                                                                                                                       <  1:31874‑M1/251‑15 (MQ=255)              cctGAGGTTTTCCGCCAGACGCCACTTCTGCCAGGCGCTGATGTGCCCGGCTTCTGACCATGCGGTCGCGTTCGGTTGCACTACGCGTACTGTGAGCCAGAGTTGCCCGGCGCTCTCCGGCTGCGGTAGTTCAGGCAGTTCAATCAACTGTTTGCCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataagctgtcaa                                                                                                                                                                                    <  1:309293‑M1/250‑18 (MQ=255)                               gACGCCACTGCTGCCAGGCGCTGATGTGCCCGGCTTCTGACCATGCGGTCGCGTTCGGTTGCACTACGCGTACTGTGAGCCAGAGTTGCCCGGCGCTCTCCGGCTGCGGTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataagctgtcaaacatgagaattccgatc                                                                                                                                                                   <  2:191446‑M1/251‑35 (MQ=255)                                                gcgcTGATGTGCCCGGCTTCTGACCATGCGGTCGCGTTCGGTTGCACTACGCGTACTGTGAGCCAGAGTTGCCCGGCGCTCTCCGGCTGCGGTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataagctgtcaaacatgagaattccgatccccaattcctggcagtt                                                                                                                                                  <  2:71696‑M1/251‑52 (MQ=255)                                                        gtgCCCGGCTTCTGACCATGCGGTCGCGTTCGGTTGCACTACGCGTACTGTGAGCCAGAGTTGCCCGGCGCTCTCCGGCTGCGGTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataagctgtcaaacatgagaattccgatccccaattcctggcagtttatggcgg                                                                                                                                          >  2:202029‑M1/1‑192 (MQ=255)                                                                                           gCACTACGCGTGCTGTGAGCCAGAGTTGCCCGGCGCTCTCCGGCTGCGGTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataagctgtcaaacatgagaattccgatccccaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttc                                                                                                        <  2:77181‑M1/250‑94 (MQ=255)                                                                                                         gtgAGCCAGAGTTGCCCGGCGCTCTCCGGCTGCGGTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataagctgtcaaacatgagaattccgatccccaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaat                                                                                           <  1:202029‑M1/249‑107 (MQ=255)                                                                                                                            cgcTCTCCGGCTGCGGTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataagctgtcaaacatgagaattccgatccccaattcctggcagtttatggcgggcgtcct                                                                                                                                   <  2:254904‑M1/190‑67 (MQ=255)                                                                                                                                                                     ttACCTTGTGGATCTAAATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACTATCCAGCTCCACCATCCAGTGCAGGAGCTCcgatgataagctgtcaaacaggagaattctgatccccaattcctggcaggttagggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaagccgctcgcggcggatatgtcctactcaggagagcgttctccgacaaacatcagataaaacg                              <  2:151112‑M1/250‑168 (MQ=255)                                                                                                                                                                                   gACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataagctgtcaaacatgagaattccgatccccaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtcttt               <  1:110094‑M1/251‑183 (MQ=255)                                                                                                                                                                                   gACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataagctgtcaaacatgagaattccgatccccaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtcttt               <  1:198922‑M1/251‑183 (MQ=255)                                                                                                                                                                                                aCTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCcgatgataagctgtcaaacatgagaattccgatccccaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagccttt  <  1:277013‑M1/251‑196 (MQ=255)                                                                                                                                                                                                                                                       |                                                                                                                                                                                                    CGGGGAGCGTCACACTGAGGTTTTCCGCCAGACGCCACTGCTGCCAGGCGCTGATGTGCCCGGCTTCTGACCATGCGGTCGCGTTCGGTTGCACTACGCGTACTGTGAGCCAGAGTTGCCCGGCGCTCTCCGGCTGCGGTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCGTTATCGCTATGACGGAACAGGTATTCGCTGGTCACTTCGATGGTTTGCCCGGATAAACGGAACTGGAAAAACTGCTGCTGGTGTTTTGCTTCCGTCAGCGCTGGATGCGGCGTGCGGTCGGCAAAGACCAGACCGTTCATACAGAACTGGCGATCGTTCGGCGTATCGCCAAAATCACCGCCGTAAGCCGACCA  >  NC_000913/364109‑364550

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.