New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4093990	13 (0.360)	24 (0.750) +GCATGCGGATCCTCTAGAGTCGACATATG	23/424	0.4	66.9%	coding (283/825 nt)	rhaD	rhamnulose‑1‑phosphate aldolase
	?	NC_000913	4097452 =	14 (0.380)					intergenic (‑4/‑284)	rhaB/rhaS	rhamnulokinase/DNA‑binding transcriptional activator RhaS

CAATCCCAATGCTATCGATACGAATCCCTTCCTCGCACACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTAAAACGATGGATTTCGCGCAGCGTCAGGCTGCGGCATTCACGCTCGTAACGCGCCAGCATCACGCGCCCACTGGATGCGCCGAGATCGACGGCGACACAATTGCGAAAGGTCATAATGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAATTCACGCTGTATCTTGAAAAATCGACGTTTTTTACGTGGTTTTCCGTCGAAAATTTAAGGTAAGAACCTGAC  >  NC_000913/4097211‑4097690                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                               cAATCCCAATGCTATCGATACGAATCCCTTCCTCTCACACCTTTTTTAATCCAAGGCGAATGGCACTTTCAAGTCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTAAAACGATGGATTTCGCGCAGCGTCAGGCTGCGGTATTCACGCTCGTAACGCGCCATCATCACGCGCCCACTTTATTCGCCGAGATCGACGGCGACATAATTGCGAAAGGTCATAATGTGATCctgc                                                                                                                                                                                                                                       <  1:394449/251‑1 (MQ=255)       cgagtgaagaccgcggtgtcgttttcaagtacataggtgagggcgatcaggttggtggcgtggcagtgcatgatcacccgatctttgccgttggtggctttaatgcgctcgcagtgggaaaggaagtgagccggaaggtcggaagtggggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAAtt                                                                                                                                                                                                                                 <  2:125452‑M2/16‑1 (MQ=255)           tgaagaccgcggtgtcgttttcaagtacataggtgagggcgatcaggttggtggcgtggcagtgcatgatcacccgatctttgccgttggtggctttcatgcgctcgccgtgggaaaggaagtgagccggaagttcggaagtggggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgccgctgtcgtcgcatgcggatcctctagagtcgacatatggtgacgatcggatgagcac                                                                                                                                                                                                                              >  1:410460‑M2/232‑235 (MQ=255)           tgaagaccgcggtgtcgttctcaagtacataggtgagggcgatcaggttggtgtcgttgcagtgcatgaactcccgatctttgccgttggtggctgtaaggcgctcgcagtgggaaaggaagtgagccgtaagttcggaagtggggacggcttcggtggttatcccccaaataatgtggtagctcgcgccggcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGa                                                                                                                                                                                                                                             <  2:410460‑M2/4‑1 (MQ=255)           gCTATCGATACGAATCCCTTCCTCGCACACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTAAAACGATGGATTTCGCGCAGCGTCAGGCTGCGGCATTCACGCTCGTAACGCGCCAGCATCACGCGCCCACTGGATGCGCCGAGATCGACGGCGACACAATTGCGAAAGGTCATAATGTGATCCTGCTGAATTTCa                                                                                                                                                                                                                              <  1:135075/250‑1 (MQ=255)            gaagaccgcggtgtcgttttcaattacataggtgagggcgatcaggttggtggcgtggcagtgcatgatcacccgatctttgccgttggtggctttaatgcgctcgcagtgggaaaggaagttagccggaagttcggaagtggggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCAtt                                                                                                                                                                                                                            <  2:25635‑M2/21‑1 (MQ=255)                  aTACGAATCCCTTCCTCGCACACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTAAAACGATGGATTTCGCGCAGCGTCAGGCTGCGGCATTCACGCTCGTAACGCGCCAGCATCACGCGCCCACTGGATGCGCCGAGATCGACGGCGACACAATTGCGAAAGGCCATAATGTGATCCTGCTGAATTTCATTACGAcc                                                                                                                                                                                                                      >  1:96423/1‑251 (MQ=255)                     ggtgtcgttttcaagtacataggtgagggcgatcaggttggtggcgtggcagtgcatgatcacccgatctttgccgttggtggctttaatgcgctcgcagtgggaaaggaagtgagccggaaggtcggaagtggggacggcttcgttggtgaacccccaaataatttggtagcccgcgccggcgctgtcgacggttgcggagcctctagagtcgacataggGTGATCCTGCTGAATTTCATTACGACCAGt                                                                                                                                                                                                                   <  1:211355‑M2/30‑1 (MQ=255)                                 aagtacataggtgagggcgatcaggttggtggcgtggcagtgcatgatcacccgatctttgccgttggtggctttaatgcgctcgcagtgggaaaggaagtgagccggaagttcggaagtggggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGGTCctgc                                                                                                                                                                                                                                       >  2:357020‑M2/210‑219 (MQ=255)                                 aagtacataggtgagggcgatcaggttggtggcgtggcagtgcatgatcacccgatctttgccgttggtggctttaatgcgctcgcagtgggaaaggaagtgagccggaagttcggaagtggggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCctgc                                                                                                                                                                                                                                       <  1:357020‑M2/10‑1 (MQ=255)                                                  cgatcaggttggtggcgtggcagtgcatgatcacccgatctttgccgttggtggctttaatgcgctcgcagtgggaaaggaagtgagccggaagttcggaagtggggacggcttcgttggttaaccctcaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTtct                                                                                                                                                                                      >  1:371573‑M2/193‑251 (MQ=255)                                                        ggttggtggcgtggcagtgcatgatcacccgatctttgccgttggtggctttaatgcgctcgcagtgggaaaggaagtgagccggaagttcggaagtggggacggctgcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTAc                                                                                                                                                                                <  2:160303‑M2/65‑1 (MQ=255)                                                                  gtggcagtgcatgatcacccgatctttgccgttggttgctttaatgcgctcgcagtgggaaaggaagtgagccggaagttcggaagtggggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccggcgctgtcggcgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGaaa                                                                                                                                                                      <  1:340772‑M2/75‑1 (MQ=255)                                                                      cAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTAAAACGATGGATTTCGCTCAGCGTCAGGCTGCGGCATTCACGCTCGTAACGCGCCAGCATCACGCGCCCACTGGATGCGCCGAGATCGACGGCGACACAATTGCGAAAGGTCATAATGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATg                                                                                                                                                                   <  2:327902/250‑1 (MQ=255)                                                                                            tgccgttggtggctttaatgcgctcgcagtgggaaaggaagtgagccggaagttcggaagtggggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGaa                                                                                                                                               >  1:16289‑M2/151‑248 (MQ=255)                                                                                                   ggtggctttaatgcgctcgcagtgggaaaggaagtgagccggaagttcggaagtggggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTGCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGt                                                                                                                                     <  1:243593‑M2/108‑1 (MQ=255)                                                                                                         tttaatgcgctcgcagtgggaaaggaagtgagccggaagttcggaagtggggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTgatgat                                                                                                                               >  2:123112‑M2/138‑251 (MQ=255)                                                                                                                  ctcgcagtgggaaaggaagtgagccggaagttcggaagtggggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAAt                                                                                                                      >  1:22593‑M2/129‑251 (MQ=255)                                                                                                                      cATTGTTAAAACGATGGATTTCGCACAGCGTCAGGCTGCGGCATTCACGCTCGTAAAGCGCCAGCATCACGCGCCCGCTGGATGCGCAGAGATCGACGGCGACACAATTGCGAAAGGTCATAATGTGATCCTGCTGAATTTCATTAAGAACAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTAACTGACAGGAAAAAGGGCCATGGGCAACCAGGGAAAGATGAAAGGGATGAGGAGCACAATTTGc                                                                                                                  >  2:356286/1‑251 (MQ=255)                                                                                                                       agtggcaaaggaagtgagccggaagttcggaagtggtgacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGAGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAAGGAAAGATGAAAGTgttgaggttcaacttttgct                                                                                                                 >  2:224235‑M2/124‑242 (MQ=255)                                                                                                                               aggaagtgagacggaagttcggaagtggggacggcttcgttggttaacccccaaataatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATGCGCGACCTGCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATtgtg                                                                                                         <  2:16289‑M2/136‑1 (MQ=255)                                                                                                                               aaCGATGGATTACACGCCGCGTCAGCCTGCGCCCTTCACGCTCGTAACGCGCCAGCATCACGCCCCCACTGGATGCGCCGAGATCGACGGCGACACAATTGCGAAAGGTCATAATGTGATCCTGCTGACTTTAATTACGACCAGCCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTGATGCTGTTCACACTTTGCTGAATtgtg                                                                                                         >  2:19671/1‑251 (MQ=255)                                                                                                                                   aTGGATATCGCGCAGCGTCAGGCTGCGGCATTCACGCTCGTAACGCGCCAGCATCACGCGCCCACTGGATGCGCCGAGATCGACGGCGACACAATTGCGAAAGGTCATAATGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTgtggtg                                                                                                      >  1:110300/1‑250 (MQ=255)                                                                                                                                       aTTTCGCGCAGCGTCAGGCTGCGGCATTCACGCTCGTAACGCGCCAGCATCACGCGCCCACTGGATGCGCCGAGATCGACGGCGACACAATTGCGAAAGGTCATAATGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGgtgatgtg                                                                                                 >  1:185810/1‑251 (MQ=255)                                                                                                                                              gcAGCGTCAGGCTGCGGCATTCACGCTCGTAACGCGCCAGCATCACGCGCCCACTGGATGCGCCGAGATCGACGGCGACACAATTGCGAAAGGTCATAATGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTc                                                                                           >  1:81779/1‑250 (MQ=255)                                                                                                                                               gttcggaagtggggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCGGAATTGTGGTGATGTGATGCTCAc                                                                                         <  2:22593‑M2/152‑1 (MQ=255)                                                                                                                                                             acggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGaaa                                                                           <  1:123112‑M2/166‑1 (MQ=255)                                                                                                                                                                                cccaaagaatgtggtagcccgcgccgtcgcgttcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACGGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTCGGGATGTGATGCTCACCGCATTTCCGGAAAATTCACGCTGTATCTTGaa                                                        <  2:199411‑M2/185‑1 (MQ=255)                                                                                                                                                                                  caaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAATTCACGCTGTATCTTGaaa                                                       >  1:79564‑M2/65‑250 (MQ=255)                                                                                                                                                                                         cACGCGCCCACTGGATGCGCCGAGATCGACGGCGACACAATTGCGAAAGGTCATAATGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAATTCACGCTGTATCTTGAAAAATCGAc                                                <  1:19671/250‑1 (MQ=255)                                                                                                                                                                                               cccACTGGATGCGCCGAGATCGACGGCGACACAATTGCGAAAGGTCATAATGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAATTCACGCTGTATCTTGAAAAATCGACGtttttt                                         <  2:110300/251‑1 (MQ=255)                                                                                                                                                                                                   cgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTAAGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAATTCACGCTGTATCTTGAAAAATCGACGTTTTTTACGt                                     >  2:193940‑M2/48‑251 (MQ=255)                                                                                                                                                                                                          gcgctgccgacgtatgctgatcctctagagtcgacatattGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCGGAATACGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAATTCACGCTGTAGCTTGAAAAATCGACGTTTTTTACGTGGTTTTc                              <  2:64991‑M2/211‑1 (MQ=255)                                                                                                                                                                                                           cgctgtcgacgcatgcggatcctctagagtcgacatatgGTGAGCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAAGTCGCGTCCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAATTCACGCTGTATCTTGAAAAATCGACGTTTTTTACGTGGTTTTc                              <  1:384239‑M2/211‑1 (MQ=255)                                                                                                                                                                                                             cGAGATCGACGGCGACACAATTGCGAAAGGTCATCATGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAATTCACGCTGTATCTTGAAAAATCGACGTTTTTTACGTGGTTTTCCGt                           >  1:381999/1‑251 (MQ=255)                                                                                                                                                                                                               gtcgacgcatgcggatcctctagagtctacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAATTCACGCTGTATCTTGAAAAATCGACGTTTTTTACGTGGTTTTCCGTc                          <  2:293929‑M2/215‑1 (MQ=255)                                                                                                                                                                                                               agaTCGACGGCGACACAATTGCGAAAGGTCATAATGGGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCGTCTCGTTACTGACAGGAAAATGGGCCATTGGTAACCAGGGAAAGATGAACGTGATGATGTTCACAAGTTGCTGAATTGTGGTGATGTGATGCTCACCGCATGTCCTGAAAGTTCACGCTGTATCTTGAAAAATCGACGGTTTTTACGTGGTGTTCCGTCg                         <  2:185810/251‑1 (MQ=255)                                                                                                                                                                                                                         gcggatccactagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTGATGATTTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCTCATTTCCTGAAAATGCACGCTGTATCTTGAAAAATCGACGGTTTTTACGTGGTTTTCCGTCGAAAATTTaa                <  2:371573‑M2/225‑1 (MQ=255)                                                                                                                                                                                                                                      agtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAAc                                                                                                                                                      >  1:305885‑M2/13‑103 (MQ=255)                                                                                                                                                                                                                                      agtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGGCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAAc                                                                                                                                                      <  2:305885‑M2/91‑1 (MQ=255)                                                                                                                                                                                                                                      aaaGGGCATAATGTGATCCTGCTGAATTTCATTACGACCAGTCTCAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAACGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCATGAAAATTAACGCTGTATCTTGAAAAATCGACGTTTTTTACGTGGTTTTCCGTCGAAAATTTAAGGTAATACCCTGAc  >  2:284500/1‑251 (MQ=255)                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                               CAATCCCAATGCTATCGATACGAATCCCTTCCTCGCACACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTAAAACGATGGATTTCGCGCAGCGTCAGGCTGCGGCATTCACGCTCGTAACGCGCCAGCATCACGCGCCCACTGGATGCGCCGAGATCGACGGCGACACAATTGCGAAAGGTCATAATGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAATTCACGCTGTATCTTGAAAAATCGACGTTTTTTACGTGGTTTTCCGTCGAAAATTTAAGGTAAGAACCTGAC  >  NC_000913/4097211‑4097690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.