New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2290113NA (NA)32 (0.870) 32/482 0.2 80.0% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 3263162 8 (0.220)coding (499/1209 nt) tdcD propionate kinase

GCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGTATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGCCGTATAAATAAGCTTCCGGAGCCATCGTCTGGTGGAAACTGGTATCAAATACCGCCACCTGAGTTACGCCCGGAAATAATTGCTGCGCCGATTCAATACCACTTAAATTGGCGTAATTATGCAGGGGTGCCAGTGGAGAAACGCGACGGATATTATCAATGACTTCATCGGTAATAATGGCGGACTCGGTAAAAATACTGCCGCCGTGAGCGATGCGGTGGCC  >  NC_000913/3262915‑3263411
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                         
gCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTGCCAGCGGCGTCATTCCCATTGAGGTATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAAgga                                                                                                                                                                                                                                                        >  2:110304‑M2/1‑248 (MQ=255)
    gctgaaaaacgataaccaactggcgatgttattcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaagcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgctccttccCTAACTCTTc                                                                                                                                                                                                                                                     <  2:157756‑M2/10‑1 (MQ=255)
      cAGGACATCGCACCAAAGTCGAAATCGCCACTGCGGGTACCCCTCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGTATCAACACTCTGACAGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAAggaaggtgc                                                                                                                                                                                                                                                  <  2:169858‑M2/251‑10 (MQ=255)
         gACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGTATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCTGTGGAAACCATAACGGCGTACACCTAAggaaggtgcgaa                                                                                                                                                                                                                                               >  1:53424‑M2/1‑239 (MQ=255)
           cATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGTATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCAAAATAtt                                                                                                                                                                                                                                             <  1:119098/251‑1 (MQ=255)
                     aaGTCGACATCGCCACTGCGGTTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGTATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACTCCTAACTCTTCATAATATTTCCACGGCAg                                                                                                                                                                                                                                   <  2:173741/251‑1 (MQ=255)
                     aaGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGTATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAAggaaggtgcgaacaagtccctgat                                                                                                                                                                                                                                   >  1:204306‑M2/1‑227 (MQ=255)
                           aCATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGGCATTCCCATTGAGGTATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCTGCAGCGAATTTGCGCGCTGGGAAACATAGCGGTTCGACGTGCCGTGGAAACCATAACTGCGTACACCTAAggaaggtgcgaacaagttcctgatatgaga                                                                                                                                                                                                                             >  2:195560‑M2/1‑221 (MQ=255)
                                 ccACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCACATTGAGGTATCAACACTCTGACCGTTGCGAACCGCGCAGCTTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGCGTCCTCTTCCGCCAGATTCAGCCGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAAggaaggtgcgaacaagtccctgatatgagatcatgt                                                                                                                                                                                                                       <  1:410766‑M2/251‑37 (MQ=255)
                                            aCCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGTATCAACCCTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg                                                                                                                                                                                                             >  1:45618‑M2/1‑204 (MQ=255)
                                                      ttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTCTTCATAATATTTCCACGGCAGGCCGTATAAATAAGCTTCCGGAGCCATCGTCt                                                                                                                                                                                                   <  1:370163‑M2/60‑1 (MQ=255)
                                                               aGCGGCGTCATTCCCATTGAGGTATCAACACTCTGACCGTTGCGCACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttc                                                                                                                                                                                          <  1:150049‑M2/250‑66 (MQ=255)
                                                                       atacgtcagtgggagagatctcactaaaaacttgggataacgccttaaatggcgaagaaacggtctaaataggctgattcaagtcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTCTTCATAATATTGCCACGGCAGGCCGTATATATGAGTTTCCGGAGCCATCGTCTGGTTGAAACTGgtataaa                                                                                                                                                                                 <  2:51202‑M2/78‑4 (MQ=255)
                                                                                tgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTCTTCATAATATTTCCACGGCAGGCCGTATAAATAAGCTTCCGGAGCCATCGTCTGGTGGAAACTGGTATCAAATACCGcc                                                                                                                                                                         >  1:7814‑M2/165‑250 (MQ=255)
                                                                                        cAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc                                                                                                                                                                <  1:101401‑M2/251‑92 (MQ=255)
                                                                                            cactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTCTTCATAATATTTCCACGGCAGGCCGTATAAATAAGCTTCCGGAGCCATCGTCTGGTGGAAACTGGTATCAAATACCGCCACCTGAGTTACg                                                                                                                                                             <  1:27187‑M2/98‑1 (MQ=255)
                                                                                               taaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTCTTCATAATATTTCCACGGCAGGCCGTATAAATAAGCTTCCGGAGCCATCGTCTGGTGGAAACTGGTATCAAATACCGCCACCTGAGTTACGCCCg                                                                                                                                                         >  1:138764‑M2/150‑251 (MQ=255)
                                                                                               ctGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTTGGAAACATAGCGGTGCGACGTTCCGTGGAAACCATAACGGCGTACACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca                                                                                                                                                           >  2:210766‑M2/1‑153 (MQ=255)
                                                                                                        gggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTCTTCATAATATTTCCACGGCATGCCGTATAAATAAGCTTCCGGAGCCATCGTCTGGTGGAAACTGGTATCAAGTACCGCCACCTGAGTTACGCCCGGAAATAAtt                                                                                                                                                <  1:162913‑M2/111‑1 (MQ=255)
                                                                                                              cgcgCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggggtcatcatgagtcatcaacataccttcgccgacagtgaattcagcagtaag                                                                                                                                          >  1:164785‑M2/1‑138 (MQ=255)
                                                                                                                  cAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCGTCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgcc                                                                                                                                      >  1:1338‑M2/1‑134 (MQ=255)
                                                                                                                   aGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccg                                                                                                                                     >  1:98821‑M2/1‑133 (MQ=255)
                                                                                                                    gATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt                                                                                                                                    <  1:280234‑M2/251‑120 (MQ=255)
                                                                                                                     aTTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc                                                                                                                                   >  2:85490‑M2/1‑131 (MQ=255)
                                                                                                                          cgcgCCCTTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacc                                                                                                                              >  2:113917‑M2/1‑126 (MQ=255)
                                                                                                                             gcCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacc                                                                                                                              <  1:385753‑M2/248‑126 (MQ=255)
                                                                                                                                          aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTCTTCATAATATTTCCACGGCAGGCCGTATAAATAAGCTTCCGGAGCCATCGTCTGGTGGAAACTGGTATCAAATACCGCCACCTGAGTTACGCCCGGAAATAATTGCTGCGCCGATTCAATACCACTTAAATTGGCGt                                                                                                               >  1:282792‑M2/107‑250 (MQ=255)
                                                                                                                                             gcCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtccgactagaaaagagattttcttgt                                                                                                           <  1:248996‑M2/251‑145 (MQ=255)
                                                                                                                                              ccACAATCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc                                                                                                          <  1:110263‑M2/251‑146 (MQ=255)
                                                                                                                                                            gattCATCTTCCGACAGATTCAGAAGCGAATGAGAGCGCTGAGAAACATAGCGGTGCGACGTGCAGTGGAAACAATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGAAGGCCGTATAAATAAGCTTCCGGAGCCATCGTCTGGTGGAAACTGGTATCAAATAACGCCACCGGAGTTACGCCCGGAAATAATTGATGCGCCGATTCAATACAACTTAAATTGGCGTAATTATGCAggggggca                                                                                              >  2:239664/4‑245 (MQ=255)
                                                                                                                                                              gTCATCTTCCGCCAGATTCAGCAGAGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTAACGTGGAAACCATAACGGCGTACACCTAAggaaggagcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcacgcatggagcagatt                                                                                          <  2:207862‑M2/251‑162 (MQ=255)
                                                                                                                                                                 aTCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGCCGTATAAATAAGCTTCCGGAGCCATCGTCTGGTGGAAACTGGTATCAAATACCGCCACCTGAGTTACGCCCGGAAATAATTTCTGCGCCGATTCAATACCACTTAAATATGCGTAATTATGCAGGGATGCCAGTgg                                                                                         >  2:164674/1‑249 (MQ=255)
                                                                                                                                                                     tCCGCCAGATTCAGCAGCGAATGGGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgcc                                                                                     >  2:150049‑M2/1‑83 (MQ=255)
                                                                                                                                                                      ccGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatg                                                                                  <  1:186706‑M2/251‑170 (MQ=255)
                                                                                                                                                                      ccGCCAGATGCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCCCGGCAGGCCGTATAAATAAGCTTCCGGAGCCATCGTCTGGTGGAAACTGGTATCAAATACCGCCACCTGAGTTACGCCCGGAAATAATTGCTGCGCCGATTCAATACCACTTAAATTGGGGGAATTATGCAGGTGTGCCAGTGGAGAAAcg                                                                                  <  2:422291/251‑1 (MQ=255)
                                                                                                                                                                           aGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGCCGTATAAATAAGCTTCCGGAGCCATCGTCTGGTGGAAACTGGTATCAAATACCGCCACCTGAGTTACGCCCGGAAATAATTGCTGCGCCGATTCAATACCACTTAAATTGGCGTAATTATGCAGGGGTGCCAGTGGAGAAACGCGACg                                                                             >  1:288318/1‑251 (MQ=255)
                                                                                                                                                                                  gcagcGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggt                                                                      >  1:349011‑M2/1‑70 (MQ=255)
                                                                                                                                                                                      cGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAAggaaggagcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtgga                                                                   <  2:81462‑M2/250‑185 (MQ=255)
                                                                                                                                                                                       catgaagaaaggaaatgactgagtcagccgagaagaatttccccgcttatcagcaccttccCTAACTCTTCATAATACTGCCACGGCAGGCCGTATAAATAAGCTTCCGGAGCCATCGTCTGGTGGAAACTGGTATCAAATACCGCCACCTGAGTTACGCCCGGAAATAATTGCTGCGCCGATTCAATACCACTTAAATTGACGTAATTATGCAGGGGTGCCAGTGGAGAAACTCGACGTATATTATCAAt                                                                 <  2:320386‑M2/190‑1 (MQ=255)
                                                                                                                                                                                         aTGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtc                                                               >  1:353141‑M2/1‑63 (MQ=255)
                                                                                                                                                                                                    gggAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgtt                                                    <  1:290269‑M2/251‑200 (MQ=255)
                                                                                                                                                                                                         aCATACCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTACggaaggagcgaacaagtccctgatatgagatcatgtttgtcatctggagccctagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagcccagaaaagagattttcttgtcccgcatggcgcagattctgccatggcaaaacatggtggaagtcatcgagccgttttacc                                               <  2:196216‑M2/251‑205 (MQ=255)
                                                                                                                                                                                                           aTAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagcttttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttacccc                                             <  1:292516‑M2/251‑207 (MQ=255)
                                                                                                                                                                                                             aGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttacccca                                            >  1:169858‑M2/1‑43 (MQ=255)
                                                                                                                                                                                                                 gTGCGACTTGCCGTGGAAACCATAACGGCGTACACCTAGCTCTTCAGAATATTTCCACGTCAGGCCGTATAAATAAGCGTCCGGAGCCATCGTCTGGTGGAATCTGGTATCAAATACCGCCACCGGAGTTACGCCCGGAAATAAGTGCTGCGCCGATTCAATACCACTTAAATTGGCGTAATTATGCAGGGGTGCCAGTGGAGAAACGCGACGGATATTATCAATGGCTTCGTCGTTAATAATGGCGGACt                                       <  2:412562/251‑1 (MQ=255)
                                                                                                                                                                                                                     gACGTGCCGTGGAAACCATAACGGCGTACACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt                                                                                                             >  1:46693‑M2/1‑35 (MQ=255)
                                                                                                                                                                                                                     gACGTGCCGTGGAAACCATAACGGCGTACACCTAAagaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt                                                                                                             <  2:46693‑M2/177‑143 (MQ=255)
                                                                                                                                                                                                                          gCCGTGGAAACCATAACGGCGTACACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctgcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtctctcatggagcagattctgccatggcaaaacatggtggtagtcatcgagccgttgtaccccaaggctggtaatggc                              >  2:385753‑M2/1‑30 (MQ=255)
                                                                                                                                                                                                                                                       aCTCTTCATAATATTTCCACGGCAGGCCGTATAAATAAGCTTCCGGAGCCATCGTCTGGTGGAAACTGGTATCAAATACCGCCACCTGAGTTACGCCCGGAAATAATTGCTGCGCCGATTCAATACCACTTAAATTGGCGTAATTATGCAGGGGTGCCAGTGGAGAAACGCGACGGATATTATCAATGACTTCATCGGTAATAATGGCGGACTCGGTAAAAATACTGCCGCCGTGAGCGATGCGGTGGcc  >  1:257789/1‑250 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                         
GCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGTATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGCCGTATAAATAAGCTTCCGGAGCCATCGTCTGGTGGAAACTGGTATCAAATACCGCCACCTGAGTTACGCCCGGAAATAATTGCTGCGCCGATTCAATACCACTTAAATTGGCGTAATTATGCAGGGGTGCCAGTGGAGAAACGCGACGGATATTATCAATGACTTCATCGGTAATAATGGCGGACTCGGTAAAAATACTGCCGCCGTGAGCGATGCGGTGGCC  >  NC_000913/3262915‑3263411

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.