| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 275508 | 0 (0.000) | 32 (0.730) | 30/456 | 0.4 | 98.5% | coding (184/1404 nt) | mmuP | S‑methyl‑L‑methionine transporter |
| ? | NC_000913 | 372749 = | 1 (0.020) | coding (635/810 nt) | mhpD | 2‑hydroxypentadienoate hydratase | |||||
ACTTCCGGCGCTGGAAGTGGTGGGGAGCCGCATTCGCGACTGGTCGATTCAGTTTGTCGATACCGTGGCAGATAACGCCTCCTGTGGGGTGTATGTCATCGGCGGTCCGGCGCAACGTCCGGCGGGGTTAGACCTGAAAAACTGCGCCATGAAGATGACGCGTAATAACGAAGAGGTTTCTAGCGGGCGCGGCAGCGAATGCCTGGGACATCCGCTTAATGCGGCCGTCTGGCTGGCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCAACATTGGTACCGATCTGATGATTAAAATTTTGCGTCACGGTC > NC_000913/372513‑372999 | gtataacaaaccttctttggatgtttagatgtccatacgtttagaaggttatatgcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattctccaataccgggtacatcatttccaccactggagcggcgggaacgctgctggccgatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCa < 2:428198‑M2/15‑1 (MQ=255) ggCGCTGGAAGTGGTGGGGAGCCGCATTCGCGACTGGTCGATTCAGTTTGTCGATACCGTGGCAGATAACGCCTCCTGTGGGGTGTATGTCATCGGCGGTCCGGCGCAACGTTCGGCGGGGTTAGAACTGAAAAACTGTGCCATGAAGCTGACGCGTTATAACGAGGAGGTTTCTAGCGGGCGGGGCAGCGGATGCCTGGGACATCCGCTTAATGCGGCCGGCTGGCTGGCACGCAAAATGGCCCGTccgg > 1:314628/1‑248 (MQ=255) aaaccttctttggatgtttagatgtccttacgtttggaaggttatattcaaacatcacaacaaaaggcgccactgaagcgcacaatgaaaacgcgtcacctgagtatgctttccttgggctgcgtgattggcacaggattattcttcaataccgggtacatcatgttcacctctggaggggcgggaacgctgctggcttatctgattggtgcgctggtgggctggctggCTCGCAAAATGGCCAGTCTggg < 2:396879‑M2/22‑1 (MQ=255) cttctttggatgtttagatgtccatacgtttagaaggttatatgcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaaagctgccggcccatcttattggtgtgcgggaggtctggttggCGCGCAAAATAGCCAGtccggggga > 1:328806‑M2/226‑247 (MQ=255) ggatgtttagatgtccatacgtttagaaggttatatgcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctgtccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggggcgctggtggtcttgctggCTCGCAAAATGGCCAGTCTGGGTGAACCGCTg < 2:434306‑M2/32‑1 (MQ=255) catacgtttagaaggttatatgcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatcttattggtgcgctggtgggctggctggGCCGCAAAAAAGGCAGGCTGGGTGGACCGCTGCGCCCCGGAGATATc > 1:285426‑M2/204‑250 (MQ=255) agaaggttatatgcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCg < 1:262528‑M2/57‑1 (MQ=255) aaggttatatgcaaacaacacaacaaaatgcgccactgaagctcacaatgaaaacgcgtcacctgattatgcgttccttgggcggcgtgattggcacaggattattcttcaattccgggtacatcattgccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtgttctggctggCACGCAAAATGGCCGGTCTGGGTGAACCGCTGCTCACCGGAGATACCATTCTTACCggg < 2:440513‑M2/59‑1 (MQ=255) atatgcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcggggacgctgctggcctatattatttgggggctggtgggctggctggCACGCCAAATGGCCAGTCTGGGGGGACCGCTGCGCCCCGGGGATATCCTTCTTACCCGGGCattt > 2:13224‑M2/187‑250 (MQ=255) atgcaaacaacacaacaaaatgcgccactgaagtgcacaatgaaaacgcgtcacctgattatgctttccttgggcggtgtgattggcacaggattattctgcaagaccgggtacattatttccacctctggagcggctggaacgctgctggcctatctgattggtgcgcttgtggtctggctggCACGCAAAATTGCCAGTCTGGGTGAACCGCTGTGCACCGGAGATATCATTCTTACCGGGGCATTAg < 1:458224‑M2/66‑1 (MQ=255) gcaaactacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggggggctggggggctggctggCACGCAAAATGGCCaggctggggggac > 1:122694‑M2/183‑204 (MQ=255) gcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcggggacgctgctggcctatctgattggggcgccgggggtctggctggCACGCAAAAAGGGCAGTCTGGGTGAACCGCCGCCCCCCGGGGGTATTATTCTTACCCGGGCATTTGGTc > 2:238038‑M2/183‑251 (MQ=255) gcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccacgggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAAc < 2:122694‑M2/27‑1 (MQ=255) caaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTcc < 2:90229‑M2/70‑1 (MQ=255) gccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCgg < 1:370209‑M2/90‑1 (MQ=255) ccactgaagcgcacaatgacaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctggtggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCggg < 2:404578‑M2/91‑1 (MQ=255) tgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaaccctgctggcctatctgattggtgcgctgggggtctggctggCCCGCAAAAAGGCCAGTCTGGGTGGACCGCTGCGCAACGGAGATATAATTCTTACCGGGGCATTAGGTCCGAAGGTGGCGGGGAAAGCGGgcggg > 1:384953‑M2/157‑249 (MQ=255) gaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATc < 1:13224‑M2/96‑1 (MQ=255) aagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCg < 1:266400‑M2/97‑1 (MQ=255) caatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgaatggtgcgctggtggtccggctggCACGCAAAAAGGGCAGACTGGGGGAACCGCTGCGCACCGGGGATATCATTCTTAACCGGGCCTTAGGGCCGGTGGTGGGGGGGAATGCGGGGGCTCGGTTTGa > 1:392347‑M2/148‑250 (MQ=255) ccctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGc < 1:57485‑M2/119‑1 (MQ=255) ttattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCCGTCTGGGGGAACCGCTGCGCACCGGAGATATCATTTTTACCGGGGCATTAGGGCCGATGGGGGCGGTGAATGCGGGCGGTCGTTTTTGAGCCCATATTGAAGGCATAGGTTTAGTTGCTGCGACCTTTTTTAACGCAGCCCCaa > 1:440070‑M2/92‑250 (MQ=255) ccggggacatcattgccaccactggagcggcgggaacgctgctggcctatctgcttggtgcgctggtgttctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGAGCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGtct < 2:106688‑M2/173‑2 (MQ=255) acgggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAACGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGcc < 1:288545‑M2/193‑1 (MQ=255) ggagcggcgggaacgctgctggcctagctgattggtgcgctggtggtctggctggCACGCAAAAGGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCAtt < 2:218767‑M2/196‑1 (MQ=255) cggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCCCGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGGCCGATGGTGGCGGGGAAAGCGGGCGATCGTTTTTGAGCCCATATTGGAGGCCTAGGGTCAGTTGCTGCGCCATTTTCCAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCg > 2:237849‑M2/52‑251 (MQ=255) agcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCgg < 1:81999‑M2/201‑1 (MQ=255) gctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCaa < 2:440070‑M2/210‑1 (MQ=255) tgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCAAc > 1:248739‑M2/40‑250 (MQ=255) ggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCAACATTgg < 1:436771‑M2/216‑1 (MQ=255) atctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCAACATTGGTAc < 1:238038‑M2/219‑1 (MQ=255) tgattggcgcgctggtggtatggctggCACGCAAAATGGCCAGGCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCCTTATCGGGTCTGGCAACATTGGTACCGATc > 2:465235‑M2/28‑251 (MQ=255) gattggtgcgctggttgtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCAACATTGGTACCGATc < 2:130519‑M2/224‑1 (MQ=255) gTCTGGCTGGCACGCAAAATGGCCAATCTGGGTGAACCGCTGCGCCCCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCCTATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCCACATTGGTACCGATCTGATGATTAAAATTTTg > 2:427412/1‑251 (MQ=255) ctggcACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTaa > 1:465288/1‑184 (MQ=255) ctggcACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTaa < 2:465288/184‑1 (MQ=255) cACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCAACATTGGTACCGATCTGATGATTAAAATTTTGCGTCACGGTc > 1:107931/1‑251 (MQ=255) | ACTTCCGGCGCTGGAAGTGGTGGGGAGCCGCATTCGCGACTGGTCGATTCAGTTTGTCGATACCGTGGCAGATAACGCCTCCTGTGGGGTGTATGTCATCGGCGGTCCGGCGCAACGTCCGGCGGGGTTAGACCTGAAAAACTGCGCCATGAAGATGACGCGTAATAACGAAGAGGTTTCTAGCGGGCGCGGCAGCGAATGCCTGGGACATCCGCTTAATGCGGCCGTCTGGCTGGCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCAACATTGGTACCGATCTGATGATTAAAATTTTGCGTCACGGTC > NC_000913/372513‑372999 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |