New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 275508	0 (0.000)	32 (0.730)	30/456	0.4	98.5%	coding (184/1404 nt)	mmuP	S‑methyl‑L‑methionine transporter
	?	NC_000913	372749 =	1 (0.020)					coding (635/810 nt)	mhpD	2‑hydroxypentadienoate hydratase

GTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGTTATGCAGTGTCTGGGCGAGCTGTCGGTCGCGATGCCGGAGACCGGAGCGTTTCACGTTTATGCCGCGCGCTATCTTGGTCCGGCTACCGGGTATACCGTGGCCTGGCTTTACTGGCTGACCTGGACCGTGGCGCTGGGTTCGAGCTTTACCGCCGCTGGATTCTGTATGCAGTACTGGTTTCCACAGGTGCCGGTATGGGTCTGGTGCGTGGTGTTCTGCGCG  >  NC_000913/275273‑275732                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                 gTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTCCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCGATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggcca                                                                                                                                                                                                                   <  2:428198‑M1/251‑16 (MQ=255)        aaaCCTTCTTTGGATGTTTAGATGTCCTTACGTTTGGAAGGTTATATTCAAACATCACAACAAAAGGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGAGTATGCTTTCCTTGGGCTGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATGTTCACCTCTGGAGGGGCGGGAACGCTGCTGGCTTATCTGATTGGTGCGCTGGTGGGCTGGCTGGctcgcaaaatggccagtctggg                                                                                                                                                                                                            <  2:396879‑M1/251‑23 (MQ=255)            cttcttTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAAAGCTGCCGGCCCATCTTATTGGTGTGCGGGAGGTCTGGTTGGcgcgcaaaatagccagtccggggga                                                                                                                                                                                                         >  1:328806‑M1/1‑225 (MQ=255)                   ggATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTGTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGGGCGCTGGTGGTCTTGCTGGctcgcaaaatggccagtctgggtgaaccgctg                                                                                                                                                                                                  <  2:434306‑M1/250‑33 (MQ=255)                                  cATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTTATTGGTGCGCTGGTGGGCTGGCTGGgccgcaaaaaaggcaggctgggtggaccgctgcgccccggagatatc                                                                                                                                                                                   >  1:285426‑M1/1‑203 (MQ=255)                                           aGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccg                                                                                                                                                                         <  1:262528‑M1/251‑58 (MQ=255)                                             aaGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCTCACAATGAAAACGCGTCACCTGATTATGCGTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATTCCGGGTACATCATTGCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGTTCTGGCTGGcacgcaaaatggccggtctgggtgaaccgctgctcaccggagataccattcttaccggg                                                                                                                                                                       <  2:440513‑M1/251‑60 (MQ=255)                                                   atatGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGGACGCTGCTGGCCTATATTATTTGGGGGCTGGTGGGCTGGCTGGcacgccaaatggccagtctggggggaccgctgcgccccggggatatccttcttacccgggcattt                                                                                                                                                                 >  2:13224‑M1/1‑186 (MQ=255)                                                     atGCAAACAACACAACAAAATGCGCCACTGAAGTGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGTGTGATTGGCACAGGATTATTCTGCAAGACCGGGTACATTATTTCCACCTCTGGAGCGGCTGGAACGCTGCTGGCCTATCTGATTGGTGCGCTTGTGGTCTGGCTGGcacgcaaaattgccagtctgggtgaaccgctgtgcaccggagatatcattcttaccggggcattag                                                                                                                                                                <  1:458224‑M1/250‑67 (MQ=255)                                                       gCAAACTACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGGGGGCTGGGGGGCTGGCTGGcacgcaaaatggccaggctggggggac                                                                                                                                                                                                       >  1:122694‑M1/1‑182 (MQ=255)                                                       gCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGGACGCTGCTGGCCTATCTGATTGGGGCGCCGGGGGTCTGGCTGGcacgcaaaaagggcagtctgggtgaaccgccgccccccgggggtattattcttacccgggcatttggtc                                                                                                                                                             >  2:238038‑M1/1‑182 (MQ=255)                                                       gCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACGGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaac                                                                                                                                                                                                       <  2:122694‑M1/209‑28 (MQ=255)                                                        cAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtcc                                                                                                                                                            <  2:90229‑M1/251‑71 (MQ=255)                                                                            gcCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgg                                                                                                                                        <  1:370209‑M1/251‑91 (MQ=255)                                                                             ccACTGAAGCGCACAATGACAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGGTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcggg                                                                                                                                       <  2:404578‑M1/251‑92 (MQ=255)                                                                                 tGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACCCTGCTGGCCTATCTGATTGGTGCGCTGGGGGTCTGGCTGGcccgcaaaaaggccagtctgggtggaccgctgcgcaacggagatataattcttaccggggcattaggtccgaaggtggcggggaaagcgggcggg                                                                                                                                   >  1:384953‑M1/1‑156 (MQ=255)                                                                                  gAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatc                                                                                                                                  <  1:13224‑M1/251‑97 (MQ=255)                                                                                   aaGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcg                                                                                                                                 <  1:266400‑M1/251‑98 (MQ=255)                                                                                          caATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGAATGGTGCGCTGGTGGTCCGGCTGGcacgcaaaaagggcagactgggggaaccgctgcgcaccggggatatcattcttaaccgggccttagggccggtggtgggggggaatgcgggggctcggtttga                                                                                                                           >  1:392347‑M1/1‑147 (MQ=255)                                                                                                         ccctGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggc                                                                                                           <  1:57485‑M1/250‑120 (MQ=255)                                                                                                                                                  ttattCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggcccgtctgggggaaccgctgcgcaccggagatatcatttttaccggggcattagggccgatgggggcggtgaatgcgggcggtcgtttttgagcccatattgaaggcataggtttagttgctgcgaccttttttaacgcagccccaa                                                                   >  1:440070‑M1/1‑91 (MQ=255)                                                                                                                                                               ccGGGGACATCATTGCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGCTTGGTGCGCTGGTGTTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgagcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtct                                                     <  2:106688‑M1/251‑174 (MQ=255)                                                                                                                                                                                   acgggagcGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaacgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgagtaagcgtaaagtcgcc                                 <  1:288545‑M1/248‑194 (MQ=255)                                                                                                                                                                                      ggAGCGGCGGGAACGCTGCTGGCCTAGCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaagggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgagtaagcgtaaagtcgccatt                              <  2:218767‑M1/251‑197 (MQ=255)                                                                                                                                                                                          cggcggGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcccgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattagggccgatggtggcggggaaagcgggcgatcgtttttgagcccatattggaggcctagggtcagttgctgcgccattttccagcgcagccccaaaaggaagtctgtcatgagtaagcgtaaagtcgccattatcg                          >  2:237849‑M1/1‑51 (MQ=255)                                                                                                                                                                                           agcgggAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgagtaagcgtaaagtcgccattatcgg                         <  1:81999‑M1/250‑202 (MQ=255)                                                                                                                                                                                                    gctgctGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgagtaagcgtaaagtcgccattatcggttctggcaa                <  2:440070‑M1/251‑211 (MQ=255)                                                                                                                                                                                                      tgctgGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgagtaagcgtaaagtcgccattatcggttctggcaac               >  1:248739‑M1/1‑39 (MQ=255)                                                                                                                                                                                                          ggCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgagtaagcgtaaagtcgccattatcggttctggcaacattgg          <  1:436771‑M1/251‑217 (MQ=255)                                                                                                                                                                                                               aTCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgagtaagcgtaaagtcgccattatcggttctggcaacattggtac       <  1:238038‑M1/249‑220 (MQ=255)                                                                                                                                                                                                                  tGATTGGCGCGCTGGTGGTATGGCTGGcacgcaaaatggccaggctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgagtaagcgtaaagtcgcccttatcgggtctggcaacattggtaccgatc  >  2:465235‑M1/1‑27 (MQ=255)                                                                                                                                                                                                                   gATTGGTGCGCTGGTTGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgagtaagcgtaaagtcgccattatcggttctggcaacattggtaccgatc  <  2:130519‑M1/250‑225 (MQ=255)                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                 GTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGTTATGCAGTGTCTGGGCGAGCTGTCGGTCGCGATGCCGGAGACCGGAGCGTTTCACGTTTATGCCGCGCGCTATCTTGGTCCGGCTACCGGGTATACCGTGGCCTGGCTTTACTGGCTGACCTGGACCGTGGCGCTGGGTTCGAGCTTTACCGCCGCTGGATTCTGTATGCAGTACTGGTTTCCACAGGTGCCGGTATGGGTCTGGTGCGTGGTGTTCTGCGCG  >  NC_000913/275273‑275732

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.