| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,586,443 | Δ555 bp | [ydeP]–[ydeQ] | [ydeP], [ydeQ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1586443 | 1586997 | 555 | 28 [0] | [0] 28 | [ydeP]–[ydeQ] | [ydeP],[ydeQ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1586442 | 0 (0.000) | 28 (0.620) | 28/466 | 0.5 | 100% | coding (45/2280 nt) | ydeP | putative oxidoreductase YdeP |
| ? | NC_000913 | 1586998 = | 0 (0.000) | coding (737/915 nt) | ydeQ | putative fimbrial adhesin protein YdeQ | |||||
AAGTAATGATTGAACCGTATTCTCAGCAAAGAAAGAGGCGTTTACCTGCTTATCCGTGACTTCCCAGGCGATTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAATTTTTTTCTTCATCTACTTATCCTGTGTGGAAATGAATTATTAGGATTTGTAATAGCGATGATGCACAGTACATACAAAGGGATTATCGCCAACATGGATATATAAGAGTAGGGGACTACTCTCTTTCTATTTTTAATCTATTATCGTTAAACAATAGATTAAATACGATAAGTTAAGCATCATCTCTCATAGTGTTTA > NC_000913/1586199‑1586672 | aagtaaTGATTGAACCGTATTCTCAGCAAAGAAAGAGGCGTTTACCTGCTTATCCGTGACTTCCCAGGCGATTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccg < 2:348396‑M1/251‑8 (MQ=255) gtaaTGATTGAACCGTATTCTCAGCAAAGAAAGAGGCGTTTACCTGCTTATCCGTGACTTCCCAGGCGATTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgat > 2:392323‑M1/1‑242 (MQ=255) cGTATTCTCAGCAAAGAAAGAGGCGTTTACCTGCTTATCCGTGACTTCCCAGGCGATTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgttgcat > 1:122369‑M1/1‑229 (MQ=255) gCAAAGAAAGAGGCGTTTTCCTGCGTATCCGTGACTTCCCAGGCGATTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCtctcccgatgcttttgttgcatcaggtgctgt < 2:293488‑M1/251‑33 (MQ=255) gagGCGTTTACCTGCTTATCCGTGACTTCCCAGGCGATTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgttgcatcaggtgctgtgttagcaaa < 1:221928‑M1/251‑42 (MQ=255) gTTTACCTGCTTATCCGTGACTTCCCAGGCGAGTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACTCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTTCTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgttgcatcaggtgctgtgttagcaaacactt < 1:121943‑M1/251‑47 (MQ=255) ccTGCTTATCCGTGACTTCCCAGGCGATTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgttgcatcaggtgctgtgttagcaaacacttgtcgg > 1:314259‑M1/1‑200 (MQ=255) ttATCCGTGACTTCCCAGGCGATTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgttgcatcaggtgctgtgttagcaaacacttgtcggctact > 2:146827‑M1/1‑195 (MQ=255) cTTCCCAGGCGATTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGAAAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgttgcatcaggtgctgtgttagcaaacacttgtcggctactgtcagtggtg > 2:278912‑M1/1‑185 (MQ=255) cAGGCGATTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgttgcatcaggtgctgtgttagcaaacacttgtcggctactgtcagtggtggcacc < 2:188255‑M1/251‑72 (MQ=255) cTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgttgcatcaggtgctgtgtt < 2:370035‑M1/205‑36 (MQ=255) cTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgttgcatcaggtgctgtgtt > 1:370035‑M1/1‑170 (MQ=255) gAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCACAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgttgcatcaggtgctgtgttagcaaacacttgtcggctactgtcagtggtggcacccgaaagataaaatgagagcttttgttcgcttgagc > 1:158595‑M1/1‑145 (MQ=255) aCTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGAACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgttgcatcaggagctgtgttagcaaacacttgtcggctactgtcagtggtgtcacccgaaagataaaatgagagctattgttcgcttgagcaatatacgc > 1:294183‑M1/1‑136 (MQ=255) ggCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgttgcatcaggtgctgtgttagcaaacacttgtcggctactgtcagtggtggcacccgaaagataaaatgagagcggttgttcgcttgagcaatatacgccaaggggtatttctg < 1:424019‑M1/250‑131 (MQ=255) ccATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgttgcatcaggtgctgtgttagcaaacacttgtcggctactgtcagtggtggcacccgaaagataaaatgagagcttttgttcgcttgagcaatatacgccaaggggtatttctgcgc > 2:347222‑M1/1‑118 (MQ=255) ccGGAAAGTCAAAGCCCTCTGGCTTATTAATGTCAAACATGGCAATAACATCCTGGCGTCTATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgttgcatcaggtgctgtgttagcaaacacttgtcggctactgtcagtggtggcacccgaaagataaaatgagagcttttgttcgcttgagcaatatacgccaaggggtatttctgcgcttccaggaa > 2:400757‑M1/1‑107 (MQ=255) tATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgttgcatcaggtgctgtgttagcaaacacttgtcggctactgtcagtggtggcacccgaaagataaaatgagag < 2:451503‑M1/172‑90 (MQ=255) tATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgttgcatcaggtgctgtgttagcaaacacttgtcggctactgtcagtggtggcacccgaaagataaaatgagag > 1:451503‑M1/1‑83 (MQ=255) aTAACATCCTGGCGTATATCCACCTGCTTACGTACTGCAGTCGCTACGGATTTAACAGCACCCactccctatgcttttgttgcatcaggtgctgtgttagcaaacactggtcgggtactgtcaggggtggctcccgaaagataaaatgggagctttggtgcgcttgagcaatatacgccaaggggtatgtctgcgcttccaggaaagtccgggagatccacggtgacagttcgaccatcaactctgcagcc < 2:40657‑M1/251‑189 (MQ=255) ggCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgttgcatcaggtgctgtgttagcaaacacttgtcggctactgtcagtggtggcacccgaaagataaaatgagagcttttgttcgcttgagcaatatacgccaaggggtatttctgcgcttccaggaaagtccgggagatccacggtgacatttcgactatcaacggtgcagccgcctgttg < 1:53460‑M1/249‑197 (MQ=255) cGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgttgcatcaggtgctgtgttagcaaacacttgtcggctactgtcagtggtggcacccgaaagataaaatgagagcttttgttcgcttgagcaatatacgccaaggggtatttctgcgcttccaggaaagtccgggagatccacggtgacatttcgactatcaacggtgcagccgcctgtgggcat < 1:392323‑M1/251‑201 (MQ=255) gTATATTCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgttgcatcaggtgctgtgttagcaaacacttgtcggctactgtcagtggtggcacccgaaagataaaatgagagcttttgttcgcttgagcaatatacgccaaggggtatttctgcgcttccaggaaagtccgggagatccacggtgacatttcgactatcaacggtgcagccgcctgttggcat > 1:136135‑M1/1‑50 (MQ=255) cATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcgtttgttgcatcaggtgctgtgttagcaaacacttgtcggctactgtcagtggtggcacccgaaagataaaatgagagcttttgttcgcttgagcaatatacgccaaggggtatttctgcgcttccagtaaagtccgggagatccacggtgacatttcgactatcaacggtgcagccgcctgttggcataacaacat < 1:374006‑M1/251‑209 (MQ=255) tctTACGTACTGCATTCGCTACGAATTTAACAGCACCCacacccgatgcttttgtttcatcaggtgctgtgttagcaaacacttgtcggctactgtcagtggtggcacccgaaagataaaatgagatcttttgttcgcttgagcaatttacgccaaggtgtatttctgcgcttccatgaaagtccgggagatcctctgatacatttcgtctttcaacggtgcagccgcctgttggcatatcaacatt < 1:278912‑M1/246‑210 (MQ=255) gCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgttgaatcaggtgctgtgcaagcaaacacttgtcagctacagtcagtggtggcacccgaaagctaaaatgagcgattttgttcgcttgagcaatatacgccaaggggaatttctgcgcttccaggaaagtccgggaaatcaacggtgacatttcgactctcaacggtgcagccgcctgttggcataacaacattgtt > 1:27874‑M1/1‑38 (MQ=255) cATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgttgcatcaggtgctgtgttagcaaacacttgtcggctactgtcagtggtggcacccgaaagataaaatgagagcttttgttcgcttgagcaatatacgccaaggggtatttctgcgcttccaggaaagtccgggagatccacggtgacatttcgactatcaacggtgcagccgcctgttggcataacaacattgttatttgaaataata < 2:240389‑M1/251‑226 (MQ=255) gCTACGGATTTAACAGCACCCactcccgatgcttttgttgcatcaggtgctgtgttagcaaacacttgtcggctactgacagtggtggcacccgaaagataaaatgagagcttttgttcgctttagcaatatgcgccaaggggtatttctgcgcttccaggaaagtccgggagatccacggtgacatttcgactatcaacggtgctgccgcctgttggcataacaacattgttatttgaaataatattcca < 1:76588‑M1/251‑231 (MQ=255) | AAGTAATGATTGAACCGTATTCTCAGCAAAGAAAGAGGCGTTTACCTGCTTATCCGTGACTTCCCAGGCGATTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAATTTTTTTCTTCATCTACTTATCCTGTGTGGAAATGAATTATTAGGATTTGTAATAGCGATGATGCACAGTACATACAAAGGGATTATCGCCAACATGGATATATAAGAGTAGGGGACTACTCTCTTTCTATTTTTAATCTATTATCGTTAAACAATAGATTAAATACGATAAGTTAAGCATCATCTCTCATAGTGTTTA > NC_000913/1586199‑1586672 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |