| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,586,443 | Δ555 bp | [ydeP]–[ydeQ] | [ydeP], [ydeQ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1586443 | 1586997 | 555 | 28 [0] | [0] 28 | [ydeP]–[ydeQ] | [ydeP],[ydeQ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1586442 | 0 (0.000) | 28 (0.620) | 28/466 | 0.5 | 100% | coding (45/2280 nt) | ydeP | putative oxidoreductase YdeP |
| ? | NC_000913 | 1586998 = | 0 (0.000) | coding (737/915 nt) | ydeQ | putative fimbrial adhesin protein YdeQ | |||||
AAGTAATGATTGAACCGTATTCTCAGCAAAGAAAGAGGCGTTTACCTGCTTATCCGTGACTTCCCAGGCGATTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1586199‑1586442‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacccACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCCAGGAAAGTCCGGGAGATCCACGGTGACATTTCGACTATCAACGGTGCAGCCGCCTGTTGGCATAACAACATTGTTATTTGAAATAATATTCCA > NC_000913/1586998‑1587227 AAGTAATGATTGAACCGTATTCTCAGCAAAGAAAGAGGCGTTTACCTGCTTATCCGTGACTTCCCAGGCGATTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCACTCCCG < 2:348396/251‑1 GTAATGATTGAACCGTATTCTCAGCAAAGAAAGAGGCGTTTACCTGCTTATCCGTGACTTCCCAGGCGATTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCACTCCCGAT > 2:392323/1‑251 CGTATTCTCAGCAAAGAAAGAGGCGTTTACCTGCTTATCCGTGACTTCCCAGGCGATTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCACTCCCGATGCTTTTGTTGCAT > 1:122369/1‑251 GCAAAGAAAGAGGCGTTTTCCTGCGTATCCGTGACTTCCCAGGCGATTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCTCTCCCGATGCTTTTGTTGCATCAGGTGCTGT < 2:293488/251‑1 GAGGCGTTTACCTGCTTATCCGTGACTTCCCAGGCGATTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAA < 1:221928/251‑1 GTTTACCTGCTTATCCGTGACTTCCCAGGCGAGTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACTCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTTCTGCATTCGCTACGGATTTAACAGCACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTT < 1:121943/251‑1 CCTGCTTATCCGTGACTTCCCAGGCGATTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGG > 1:314259/1‑251 TTATCCGTGACTTCCCAGGCGATTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACT > 2:146827/1‑251 CTTCCCAGGCGATTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGAAAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTG > 2:278912/1‑251 CAGGCGATTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACC < 2:188255/251‑1 CTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTT < 2:370035/205‑1 CTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTT > 1:370035/1‑205 GAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCACAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGC > 1:158595/1‑251 ACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGAACTGCATTCGCTACGGATTTAACAGCACCCACTCCCGATGCTTTTGTTGCATCAGGAGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGTCACCCGAAAGATAAAATGAGAGCTATTGTTCGCTTGAGCAATATACGC > 1:294183/1‑251 GGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCGGTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTG < 1:424019/250‑1 CCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGC > 2:347222/1‑251 CCGGAAAGTCAAAGCCCTCTGGCTTATTAATGTCAAACATGGCAATAACATCCTGGCGTCTATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCCAGGAA > 2:400757/1‑249 TATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAG < 2:451503/172‑1 TATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAG > 1:451503/1‑172 ATAACATCCTGGCGTATATCCACCTGCTTACGTACTGCAGTCGCTACGGATTTAACAGCACCCACTCCCTATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTGGTCGGGTACTGTCAGGGGTGGCTCCCGAAAGATAAAATGGGAGCTTTGGTGCGCTTGAGCAATATACGCCAAGGGGTATGTCTGCGCTTCCAGGAAAGTCCGGGAGATCCACGGTGACAGTTCGACCATCAACTCTGCAGCC < 2:40657/251‑1 GGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCCAGGAAAGTCCGGGAGATCCACGGTGACATTTCGACTATCAACGGTGCAGCCGCCTGTTG < 1:53460/249‑1 CGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCCAGGAAAGTCCGGGAGATCCACGGTGACATTTCGACTATCAACGGTGCAGCCGCCTGTGGGCAT < 1:392323/251‑1 GTATATTCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCCAGGAAAGTCCGGGAGATCCACGGTGACATTTCGACTATCAACGGTGCAGCCGCCTGTTGGCAT > 1:136135/1‑250 CATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCACTCCCGATGCGTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCCAGTAAAGTCCGGGAGATCCACGGTGACATTTCGACTATCAACGGTGCAGCCGCCTGTTGGCATAACAACAT < 1:374006/251‑1 tCTTACGTACTGCATTCGCTACGAATTTAACAGCACCCACACCCGATGCTTTTGTTTCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGATCTTTTGTTCGCTTGAGCAATTTACGCCAAGGTGTATTTCTGCGCTTCCATGAAAGTCCGGGAGATCCTCTGATACATTTCGTCTTTCAACGGTGCAGCCGCCTGTTGGCATATCAACATT < 1:278912/246‑1 GCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCACTCCCGATGCTTTTGTTGAATCAGGTGCTGTGCAAGCAAACACTTGTCAGCTACAGTCAGTGGTGGCACCCGAAAGCTAAAATGAGCGATTTTGTTCGCTTGAGCAATATACGCCAAGGGGAATTTCTGCGCTTCCAGGAAAGTCCGGGAAATCAACGGTGACATTTCGACTCTCAACGGTGCAGCCGCCTGTTGGCATAACAACATTGTT > 1:27874/1‑250 CATTCGCTACGGATTTAACAGCACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCCAGGAAAGTCCGGGAGATCCACGGTGACATTTCGACTATCAACGGTGCAGCCGCCTGTTGGCATAACAACATTGTTATTTGAAATAATA < 2:240389/251‑1 GCTACGGATTTAACAGCACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGACAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTTAGCAATATGCGCCAAGGGGTATTTCTGCGCTTCCAGGAAAGTCCGGGAGATCCACGGTGACATTTCGACTATCAACGGTGCTGCCGCCTGTTGGCATAACAACATTGTTATTTGAAATAATATTCCA < 1:76588/251‑1 AAGTAATGATTGAACCGTATTCTCAGCAAAGAAAGAGGCGTTTACCTGCTTATCCGTGACTTCCCAGGCGATTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1586199‑1586442‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacccACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCCAGGAAAGTCCGGGAGATCCACGGTGACATTTCGACTATCAACGGTGCAGCCGCCTGTTGGCATAACAACATTGTTATTTGAAATAATATTCCA > NC_000913/1586998‑1587227 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |