Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,361,732 IS5 (–) +4 bp coding (557‑560/765 nt) gltF → periplasmic protein GltF

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3361732 =0 (0.000)23 (0.680) 20/486 0.6 100% coding (557/765 nt) gltF periplasmic protein GltF
?NC_000913 = 3366750 NA (NA)noncoding (1/1195 nt) IS5 repeat region
* ? NC_000913 = 33617350 (0.000)37 (1.090) 35/486 0.1 100% coding (560/765 nt) gltF periplasmic protein GltF
?NC_000913 3365556 = NA (NA)noncoding (1195/1195 nt) IS5 repeat region

ATTGTAGCGTTAAACGACACATCCTATATTGAAAAAGCTTATGATACTCTCGTAGATATGAAGGGAACGAAAAACGCCTTTGGTTTAGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCTGACAAGTTGCTCAGCAATCGAGCGCGGTTATTCTGTTGCAAAAACAGGGGAACTGACACCTGTTGCTATTACAGCGGTCACCTTCCCGTTACTGATTGATGCTGCGGTAAATGACAATACTATTCTTGGTTCTGATGAAACGATCAAACTGGATGGTAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATT  >  NC_000913/3361488‑3361973
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                 
ggttccagcggataaggtcgccggccctttccagcctttgggtaaaacgggtcgatgacttcccccaagttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttcttgtctggaggcgcttactgctgaattcactgtcggcgaagggaaggtgatgactcatgatgaaccctgttctattgctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATgg                                                                                                                                                                                                                                             >  2:288180‑M1/245‑251 (MQ=255)
  tGTAGCGTTAAACGAAACATCCTATATTGAAAAAGCTTATGATACTCTCGTAGATATGAAGGGCACGAAAAACGCCTTTGGTTTAGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAgga                                                                                                                                                                                                                                             >  2:233428‑M1/1‑246 (MQ=255)
   gTAGCGTTAAACGACACATCCTATATTGAAAAAGCTTATGATACTCTCGTAGATATGAAGGGAACGAAAAACGCCTTTGGTTTAGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAggaagg                                                                                                                                                                                                                                          >  2:265501‑M1/1‑245 (MQ=255)
     cagcggataaggtcgccggccattaccagccttagggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATGGCGCAt                                                                                                                                                                                                                                        >  2:94780‑M1/240‑251 (MQ=255)
     aGCGTTAAACGACACATCCTATATTGAAAAAGCTTATGATACTCTCGTAGATATGAAGGGAACGAAAAACGCCTTTGGTTTAGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAggaaggtg                                                                                                                                                                                                                                        >  1:22666‑M1/1‑243 (MQ=255)
      agcggataaggtcgccggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcgacgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctgatatcagggacttgttcgcaccttccCTAATGGCGCAtt                                                                                                                                                                                                                                       >  1:171715‑M1/239‑251 (MQ=255)
       cGTTATACGACACATCCTCTATTGAAAAAGCTTATGCTACTCTCGTAGATATGAAGGGAACGCAAAACGCATTTAGTTTAGGATATGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGAATTGACAGGACTAATGGCGGGATTCACGCGGCGGACGCTACAGGTGCAATTACTGTCGACCTGATTAAAACTGACCACTGGCAAGCAGCGACACCCACATGGAAAGCCTCAACTaaggaaggagcg                                                                                                                                                                                                                                      >  2:313523/1‑241 (MQ=255)
          gataaggtcgccggccattaccagccttggggtaaaacggctcgatgacttcccccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttaatgctgaattcaatgtcggcgaaggtaagttgatgactcatgatgcaccctgttctatggctccagatgcaaaacatgatctcatatcagggacttgttcgcaccttccCTAATGGCGCATTCtgt                                                                                                                                                                                                                                   <  2:152838‑M1/17‑2 (MQ=255)
             actacacatcCTATAGTGAAAAAGCATATGATACTCTCGTAGATATGAAGGGAACGAAAAACGCCTTTGGGTTAGGTTCTGCGCCTAATGGACAAAAAAGTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATGCAAACTGACCACGGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAggaagttgcgaataag                                                                                                                                                                                                                                <  2:133347‑M1/248‑17 (MQ=255)
             aaggtcgccggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATGGCGCATTCTGCTc                                                                                                                                                                                                                                 >  1:246189‑M1/232‑250 (MQ=255)
              cGACACATCCTATATTGAAAAAGCTTATGATACTCTCGTAGATATGAAGGGAACGAAAAACGCCTTTGGTTTAGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGGCGACCTGATGCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAggaaggtgcgaataagc                                                                                                                                                                                                                               <  2:22666‑M1/251‑18 (MQ=255)
                              gAAAAAGCTTATCATTCTCTCGTAGATATGAAGGGAACGAAAAACGCCTTTGGTTTAGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTTCATCCATTGGTATTGACAGGTCTAATGGTAGGATTCACGCGGCTGACGATACAGGTGAAATTCCTGTCGGCCTGATTCAAACTGACCACTGGTCAGCAGCGCCCCCCACATTGAAAGCCTCGTCTAAggaaggtgcgaataagcggggaaattcttctcg                                                                                                                                                                                                               <  1:132640‑M1/251‑34 (MQ=255)
                                 gccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcctgatgaaccctgttctatggctccagatgtcaaacatgatctcataacagggacttgttggccccttccCTAATGGCCCCTTCTGCCCGCTGACAAGTTGCTCAGCAAt                                                                                                                                                                                                            <  2:119133‑M1/40‑1 (MQ=255)
                                 gccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttgtctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgtttgcaccttccCTAATGGCGCATTCTTCTCGCTTACAAGTTGCTCAGCAAt                                                                                                                                                                                                            >  2:182509‑M1/212‑251 (MQ=255)
                                 gccctggggtaaaacggctcgatgacatccaccatgttttgccatggcagaaactgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgagctcatatcagggacttgttcgcaccgtccCTAATGGCGCATTCTGCTCGCTGACAAGTTGCTCAGCAAt                                                                                                                                                                                                            >  1:119133‑M1/212‑251 (MQ=255)
                                            tACTCTCGTAGCTATGACGGGAACGAAAAACGCCTTTGGTTTAGGTTCTGAGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAACTTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcat                                                                                                                                                                                                 >  2:169015‑M1/1‑204 (MQ=255)
                                             aCTCTCGTAGATATGAAGGGAACGAAAAACGCCTTTGGTTTAGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatt                                                                                                                                                                                                <  1:336360‑M1/251‑49 (MQ=255)
                                                ggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagagaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATGGCGCATTCTGCTCGCTGACAAGTTGCTCAGCAATCGAGCGCGGTTATTc                                                                                                                                                                                             <  2:134162‑M1/55‑1 (MQ=255)
                                                   gTAGATATGAAGGGAACGAAAAACGCCTTTGGTTTAGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTATAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcattt                                                                                                                                                                                          >  1:218582‑M1/1‑197 (MQ=255)
                                                          tGAAGGGAACGAAAAACGCCTTTGGTTTAGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatg                                                                                                                                                                                   >  2:321841‑M1/1‑190 (MQ=255)
                                                                ccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATGGCGCATTCTGCTCGCTGACAAGTTGCTCAGCAATCGAGCGCGGTTATTCTGTTGCAAAAACAggg                                                                                                                                                                             >  2:104163‑M1/181‑251 (MQ=255)
                                                                     aaaaaCGCCTTTGGTTTAGGTTCTTAGCATAATGGCCAATCAATTGGCGCTGCATACATTGGTATTGACAGGTCTAATGGTGGGTTTCAAGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAACATGGCCACTGGTCAGCAGCCACCCCCACATGGAAAGCCTCATCTAAggaaggtgcgaataagcggggaaattattctcggctgactcagtcatttcatttcttcatgtttgtgccgat                                                                                                                                                                        >  2:122734‑M1/1‑179 (MQ=255)
                                                                                      aGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatg                                                                                                                                                       <  1:78798‑M1/251‑90 (MQ=255)
                                                                                      aGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaat                                                                                                                                                        <  1:329854‑M1/250‑89 (MQ=255)
                                                                                                         aaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATGGCGCATTCTGCTCGCTGACAAGTTGCTCAGCAATCGAGCGCGGTTATTCTGTTGCAAAAACAGGGGAACTGACACCTGTTGCTATTACAGCGGTCACCTTCCCGtt                                                                                                                                    >  1:49217‑M1/140‑251 (MQ=255)
                                                                                                              aaTTGGCGCTGCATACATTGGGATTGACATGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAGTTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAggaaggtgcgaataagcggggaacttcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtacctgccttgaatcatcctatttataccg                                                                                                                               >  2:62861‑M1/1‑138 (MQ=255)
                                                                                                               tcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATGGCGCATTCTGCTCGCTGACAAGTTGCTCAGCAATCGAGCGCGGTTATTCTGTTGCAAAAACAGGGGAACTGACACCTGTTGCTATTACAGCGGTCACCTTCCCGTTACtgat                                                                                                                              <  2:157819‑M1/118‑1 (MQ=255)
                                                                                                                 tGGCGCTGCATCCAGTGGTATTGACAGGTTTAATGGTGGGATTCACGCGTCGGACGATACAGGTGAAATTCCTGTCGGCCTGATTCAAACTGACCTCTTGTCAGCAGCGAACCCCTCATGGAAAGCCTCATCTAAggaaggtgcgaataagcggggaaatgcttctcggttgactcagtcatttcatttcttcatgttttagccgatttttgcgcccgtaaaggccttgaatcagcctatttagaccgtt                                                                                                                             <  2:221454‑M1/250‑116 (MQ=255)
                                                                                                                  tttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaacccggttctatggctccagatgacaaacatgagctcagatcagggacttgttcgcaccttccCTAATGGCGCATTCTGCTCGCTGACAAGTTGCTCAGCAATCGAGCGCGGTTATTCTGTTGCAAAAACAGGGGAACTGACACCTGTTGCTATTACAGCGGTCACCTTCCCGTTACtgattg                                                                                                                            >  2:27654‑M1/131‑250 (MQ=255)
                                                                                                                  ggCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttc                                                                                                                           >  1:18700‑M1/1‑134 (MQ=255)
                                                                                                                    cgcTGCATCAACTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGACAGCCTCATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttctt                                                                                                                         >  2:225971‑M1/1‑132 (MQ=255)
                                                                                                                     gcTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttc                                                                                                                        >  2:142‑M1/1‑131 (MQ=255)
                                                                                                                         cATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgcc                                                                                                                     >  1:256039‑M1/1‑127 (MQ=255)
                                                                                                                         cATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTAGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgcc                                                                                                                     >  1:128460‑M1/1‑127 (MQ=255)
                                                                                                                                  gcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacgtgttcgcaccttccCTAATGGCGCATTCTGCTCGCTGACAAGTTGCTCAGCAATCGAGCGCGGTTATTCTGTTGCAAAAACAGGGGAACTGACACCTGTTGCTATTACAGCGGTCACCTTCCCGTTACTGATTGATGCTGCGGTAAATGAc                                                                                                           >  2:180431‑M1/115‑251 (MQ=255)
                                                                                                                                     ttGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgtt                                                                                                         >  1:37750‑M1/1‑115 (MQ=255)
                                                                                                                                               ttcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATGGCGCATTCTGCTCGCTGACAAGTTGCTCAGCAATCGAGCGCGGTTATTCTGTTGCAAAAACAGGGGAACTGACACCTGTTGCTATTACAGCGGTCACCTTCCCGTTACTGATTGATGCTGCGGTAAATGACAATACTATTCTTg                                                                                              <  1:115415‑M1/150‑1 (MQ=255)
                                                                                                                                                    gtggGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAggaaggtgcgaataagcggggaaagtcttctcggctgactcagtcatttcatttcttcatgtttgagcggattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgcca                                                                                                                    <  1:233908‑M1/224‑125 (MQ=255)
                                                                                                                                                    gtggGATTCACGCGGCGGACGACACAGGTGAAATTCCTGTCGACCTGATTCAAACTGCCCACTGGCCAGCAGCGCCCCCCACATGGAAAGCCTCCTCTACggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatccgcctatttagaccgtttcttcgccc                                                                                                                    >  2:233908‑M1/1‑100 (MQ=255)
                                                                                                                                                           gaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATGGCGCATTCTGCTCGCTGACAAGTTGCTCAGCAATCGAGCGCGGTTATTCTGTTGCAAAAACAGGGGAACTGACACCTGTTGCTATTACAGCGGTCACCTTCCCGTTACTGATTGATGCTGCGGTAAATGACAATACTATTCTTGGTTCTGATGaa                                                                                   <  1:233433‑M1/161‑1 (MQ=255)
                                                                                                                                                            cACGCGGCGGACGATACAGGTGACATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctc                                                                                 >  1:96913‑M1/1‑92 (MQ=255)
                                                                                                                                                            cACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttcgtgagatctc                                                                                 >  2:124528‑M1/1‑92 (MQ=255)
                                                                                                                                                            cACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttctgcgccatttaaggcgttatccccagtttttagtgagatct                                                                                  <  1:307244‑M1/250‑159 (MQ=255)
                                                                                                                                                              ggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATGGCGCATTCTGCTCGCTGACAAGTTGCTCAGCAATCGAGCGCGGTTATTCTGTTGCAAAAACAGGGGAACTGACACCTGTTGCTATTACAGCGGTCACCTTCCCGTTACTGATTGATGCTGCGGTAAATGACAATACTATTCTTGGTTCTGATGAAACGa                                                                               >  1:75921‑M1/87‑251 (MQ=255)
                                                                                                                                                               gtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttctcaccttccCTAAGGGCTCATTCTGCTCGCTGACAAGTTGCGCAGCAATCGATCGCGGTTATTCTGTTGCAAAAACATGGGAACTGACACCTGTTGCTATTACATCGGTCACCTGCCTGTTACTGATTGATGCTGCGGTAAATGATAATGCTATTCTTGGTTGTGATGAAACgac                                                                              >  2:158373‑M1/86‑250 (MQ=255)
                                                                                                                                                                  gcggACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctccacc                                                                           >  2:185921‑M1/1‑86 (MQ=255)
                                                                                                                                                                       cGATACAGGTTAAATGCCTGTCGACCTGATTCAAACTGTCCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAggaaggtgcgaataagcggggaaattcttctcggctgacgcagtcattgcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcgtcgccatttaaggcgttatccccagtttttagtgagatctcgtccactgacg                                                                      <  2:263261‑M1/251‑171 (MQ=255)
                                                                                                                                                                       cGATACAGGTGAAATTCCTGTCGACCTGATTCACACTGCCCACTGGTAAGCAGCGCCCCCCACATCGAAACCCTCATCTAAggaaggggcgaatcagcgcggcaaatcttcccggctgactcagtcatttcatttcttaatgtttgagccgattttttctcccgtaaatgccttgaatcagcctctttagaccgtttcttcgccatttaaggcgctatccccagtttttcgtgagatctctcacactgacg                                                                      >  1:230553‑M1/1‑81 (MQ=255)
                                                                                                                                                                                      tCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAggacggtgcgaataagcggggcacttcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgc                                                       >  2:355265‑M1/1‑66 (MQ=255)
                                                                                                                                                                                           tCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAggaaggtgcgaataagcggggaccttcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttcgaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccga                                                   >  1:362397‑M1/1‑61 (MQ=255)
                                                                                                                                                                                            tctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATGGCGCATTCTGCTCGCTGACAAGTTGCTCAGCAATCGAGCGCGGTTATTCTGTTGCAAAAACAGGGGAACTGACACCTGTTGCTATTACAGCGGTCACCTTCCCGTTACTGATTGATGCTGCGGTAAATGACAATACTATTCTTGGTTCTGATGAAACGATCAAACTGGATGGTAACGTCACTATCAGCg                                                 <  2:51568‑M1/195‑1 (MQ=255)
                                                                                                                                                                                              aCCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaac                                                >  1:299110‑M1/1‑58 (MQ=255)
                                                                                                                                                                                                 ggctccagatgactaacatgatctcatatcagggacttgttcgcaccttccCTAATGGCGCATTCTGCTCGCTGACAAGTTGCTCAGCAATCGAGCGCGGTTATTCTGTTGCAAAAACAGGGGAACTGACACCTGTTGCTATGACAGCGGTCACCTTCCCGTTACTGATTGATGCTGCGGTAAATGACAATACTATTCTTGGTGCTGGTGAAACGATGAAACTGGATGGTAACGTCACTATCAGCGTTCa                                             >  1:219487‑M1/52‑250 (MQ=255)
                                                                                                                                                                                                 ggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATGGCGCATTCTGCTCGCTGACAAGTTGCTCAGCAATCGAGCGCGGTTATTCTGTTGCAAAAACAGGGGAACTGACACCTGTTGCTATTACAGCGGTCACCTTCCCGTTACTGATTGATGCTGCGGTAAATGACAATACTATTCTTGGTTCTGATGAAACGATCAAACTGGATGGTAACGTCACTATCAGCGTTCa                                             >  1:134162‑M1/52‑250 (MQ=255)
                                                                                                                                                                                                        aaCTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggcc                                       >  2:107433‑M1/1‑48 (MQ=255)
                                                                                                                                                                                                         aCTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagc                                    <  1:87889‑M1/251‑205 (MQ=255)
                                                                                                                                                                                                             caaacatgatctcatatcagggacttgttcgcaccttccCTAATGGCGCATTCTGCTCGCTGACAAGTTGCTCAGCAATCGAGCGCGGTTATTCTGTTGCAAAAACAGGGGAACTGACACCTGTTGCTATTACAGCGGTCACCTTCCCGTTACTGATTGATGCTGCGGTAAATGACAATACTATTCTTGGTTCTGATGAAACGATCAAACTGGATGGTAACGTCACTATCAGCGTTCAGTATTTATAAGaa                                >  2:103576‑M1/40‑251 (MQ=255)
                                                                                                                                                                                                                         cagcGACCCCCACATGGAAAGCCTCATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgcca                    <  1:142‑M1/251‑221 (MQ=255)
                                                                                                                                                                                                                                      aTGGAAAGCCTCATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttggttatcgtt       >  1:205558‑M1/1‑18 (MQ=255)
                                                                                                                                                                                                                                        ggAAAGCCTCATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttggttatcgttt      <  1:82768‑M1/250‑235 (MQ=255)
                                                                                                                                                                                                                                           gcaccttccCTAATGGCGCATTCTGCTCGCTGACAAGATGCTCAGCAATCGAGCGCGGTTATTCTGTTGAACAAACAGGGGACCTGACACCTGTTGCTATTCCAGCGGTCACCTTCCCGTTACTGCTTGATGCTGCGGTAAATGACAATACTATTCTTGGTTCTGATGAAACGATCAACCTGGATGGTAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCAtt  <  2:290402‑M1/242‑1 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                 
ATTGTAGCGTTAAACGACACATCCTATATTGAAAAAGCTTATGATACTCTCGTAGATATGAAGGGAACGAAAAACGCCTTTGGTTTAGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCTGACAAGTTGCTCAGCAATCGAGCGCGGTTATTCTGTTGCAAAAACAGGGGAACTGACACCTGTTGCTATTACAGCGGTCACCTTCCCGTTACTGATTGATGCTGCGGTAAATGACAATACTATTCTTGGTTCTGATGAAACGATCAAACTGGATGGTAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATT  >  NC_000913/3361488‑3361973

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.