New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 62378	56 (1.650)	4 (0.120)	4/486	2.6	8.3%	coding (887/2907 nt)	rapA	RNA polymerase‑binding ATPase and RNAP recycling factor
	?	NC_000913	88275 =	32 (0.940)					coding (248/1005 nt)	cra	DNA‑binding transcriptional dual regulator Cra
Rejected: Frequency below/above cutoff threshold.

CGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGATGTTCCAGGCGCTGTTTGCTACGACGGGCAAAATCCAGCGAGCAAATCACCAGCTGTTCGGTGTCAAACGGGTTGTAAGCATCGTGCTGAGCTTCGGCATAACGCTCATCATCAAATAGCGCAAAGCGCAGGTTGAAACGGCGCAGCATTTCTACCAGCCAC  >  NC_000913/62130‑62623                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                      cGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGat                                                                                                                                                                                                                                                       <  1:112127/249‑1 (MQ=255)    cgatcatttccacGAGCATATTCAGTCCGTCATACCTCAGTCTGTAACCTGCCAGCAGAATGGCACCGGCGTCCGCAACCGCACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAACCGGTTCGGGTCCAGCCGACGCAGACGGGCGAAGAGGCTCTCCATCCCCAGCTCTTCCGGCGTCGCGGTCAGC‑AGCAGACCGCCCGGCACGTGCTCTGCCCGCTGTTCAATGGCCTGATATTcc                                                                                                                                                                                                                                                  >  2:145300/13‑250 (MQ=255)    cGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCa                                                                                                                                                                                                                                                  <  1:108791/251‑1 (MQ=255)        catcTCGCCGAGCAGGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACgg                                                                                                                                                                                                                                               <  1:14591/250‑1 (MQ=255)                 gAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCCCGTGCTCTGCCAGTTGTTCAATGGCCTGTTATTCACGGCTTGGCGCAt                                                                                                                                                                                                                                     >  2:99365/1‑251 (MQ=255)                 gAGCATGTTCAGTTCGTCATTGCGCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGAAATTCACGGCTTGGCGCAt                                                                                                                                                                                                                                     <  1:41533/251‑1 (MQ=255)                    cATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCtt                                                                                                                                                                                                                                  <  1:264236/251‑1 (MQ=255)                     aTGTTCAGTTCGTCATTGCTCAGTTTGTTTCCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGGGCTCTGCCAGTTGTTCAATGGTCTGATttgaacgccaggggcggctacg                                                                                                                                                                                                                                 <  2:170446‑M1/251‑23 (MQ=255)                     aTGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTc                                                                                                                                                                                                                                 >  1:52831/1‑251 (MQ=255)                       gTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCg                                                                                                                                                                                                                                <  1:259916/250‑1 (MQ=255)                               cGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCacac                                                                                                                                                                                                                        <  1:217522/250‑1 (MQ=255)                                   aTTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAGCCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGCCGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCCATGACCTGCTATTCACGGCTTGGCGCATCTTCGCTCcaccacaggt                                                                                                                                                                                                                   >  2:116941/1‑244 (MQ=255)                                   aTTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGt                                                                                                                                                                                                                   <  1:152668/251‑1 (MQ=255)                                      gCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGAt                                                                                                                                                                                                                >  1:43139/1‑251 (MQ=255)                                              tGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCCGGTGATGCGCTTcc                                                                                                                                                                                                        >  2:9659/1‑250 (MQ=255)                                                           cagcaTGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCGCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACcagca                                                                                                                                                                                           <  1:333175/251‑1 (MQ=255)                                                                 ggCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTccc                                                                                                                                                                                     >  1:290969/1‑251 (MQ=255)                                                                     aCGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCGCTGCCTGTTGTTCAATGGCCTGATATTCGCGGCTTGGCGCATCTTCGCTCCACTCCATGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTc                                                                                                                                                                                 <  1:346714/251‑1 (MQ=255)                                                                     aCGGCGTCCGCAACCGGACGATAATTTTGCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCGCGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTc                                                                                                                                                                                 <  1:327759/251‑1 (MQ=255)                                                                      cGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCg                                                                                                                                                                                <  1:177030/251‑1 (MQ=255)                                                                       ggCGTCCGCAACCGGCCGATAATTTTTCTGCTCTTCAACGACCTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCCTTCgg                                                                                                                                                                               >  2:228312/1‑251 (MQ=255)                                                                        gCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCCTTCGGc                                                                                                                                                                              >  2:226982/1‑251 (MQ=255)                                                                         cGTCCGCAACCGGACGATAATTTTTCTGCTCTTCACCGAACTGCGCAAAATCGAGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCCGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCCCACCAGGTGATGGGCTTACTCGCCCACCACCAGGTCCCCTTCGGCt                                                                                                                                                                             >  2:47425/1‑251 (MQ=255)                                                                                 aCCGGCCGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTACATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCCCACCAGGTGATGCGCTTCATCGACCACCAGCCGGTCCCATTCGGCTTCACag                                                                                                                                                                       >  1:306121/1‑249 (MQ=255)                                                                                   cGGACGATAATTTTTCGGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCAGCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGAt                                                                                                                                                                   <  2:283514/251‑1 (MQ=255)                                                                                     gACGATAATTTTTCTGCTCCTCAACGAACTGCGAAAAATCGGGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTGTCCATCCCCTGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCATGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCTCGGCTTGGCGCATCTTCGCTCCACCCCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGATGt                                                                                                                                                                 <  2:256540/251‑1 (MQ=255)                                                                                       cGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCACATTCGGCTTCACAGAGATGTTc                                                                                                                                                               >  1:117134/1‑251 (MQ=255)                                                                                       cGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGGTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGATGTTc                                                                                                                                                               <  2:268585/251‑1 (MQ=255)                                                                                             tttttCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGGGATGCGCTTCATCGACCACCCGCAGGTCCCATTCGGCTTCACAGCGCTGTTCCAGgcc                                                                                                                                                         >  2:120346/1‑250 (MQ=255)                                                                                                   tGCTCTTAAACGCACTGAGGCAAATCGTGGAACCGGCTCGGGTCCAGAAGACGCAGACGGGCGCCGTGGCTTTCCATCCCCCGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCAGGCACGTGCTCTGCCAGTTGTTCACTGGCCTGATttgaacgccaggcgcggcaacgggcttatcaactgctgcttgcctgctcagaagatcagccagacaacgaaatgcggtgcattgcgcaccttttccagcg                                                                                                                                                   >  2:175450‑M1/1‑151 (MQ=255)                                                                                                    gCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTGCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGATGTTCCAGGCGCTGTTTg                                                                                                                                                  <  1:228312/251‑1 (MQ=255)                                                                                                                   gcgcAAAATCGTGGAAACGGTGCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCTCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGATGTGCCAGGCGCGGTTTGCTACGACGGGCaa                                                                                                                                     <  2:52600/249‑1 (MQ=255)                                                                                                                   gcgcAAAAGCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTTATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGATGTTCCAGGCGCTGTTTGCTACGACGGGCaaa                                                                                                                                    <  2:52831/250‑1 (MQ=255)                                                                                                                     gcaaacgctgtgAAACGGTTCGGGTCCAGCAGACGCAGCAGGGCGACGTGTCTTGCCTTCCCCAGCTGTTCCGGGGTCGCGGGAAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGGTCAATGGCCTGCTATTCTCGGCTTGGCGCATCTTCGCACCACACCAGGTGAGGCGCTTCATCGACCACCAGCAGGTTCCATTCGGCTTCACAGAGATGTTCCAGGCGGTGTTTGCTACGACGGGCAAAATc                                                                                                                                 <  2:303810/240‑1 (MQ=255)                                                                                                                         aaTCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGATGTTCCAGGCGCTGTTTGCTACGCCGGGCAAAATCCAGc                                                                                                                             >  2:253891/1‑251 (MQ=255)                                                                                                                               ggAAACGGTCCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAACTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATGCGGCTTCACAGAGATGTACCAGGCGCTGTTTGCTACGACGGTCAAAATCCAGCGAGCaa                                                                                                                       <  2:231090/251‑1 (MQ=255)                                                                                                                                gAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGATGTTCCAGGCGCTGTTTGCTACGACGGGCAAAATCCAGCGAGCaaa                                                                                                                      <  1:75562/251‑1 (MQ=255)                                                                                                                                 aaaCGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGATGTTCCAGGCGCTGTTTGCTACGACGGGCAAAATCCAGCGAGCAAAt                                                                                                                     <  1:306120/251‑1 (MQ=255)                                                                                                                                      gTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGATGTTCCAGGCGCTGTTTGCTACGACGGGCAAAATCCCGCGAGCAAATCAcc                                                                                                                 >  1:315564/1‑250 (MQ=255)                                                                                                                                        tCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGATCCACACCCGGTGATGCGCTTCATCGACCACCAGCAGGTCCCCTTCGGCTTCACAGAGTTGTTCCCAGCCCTGGTTGGTACGACCGGCAAAATcccgggtgccaaacaccagc                                                                                                              >  2:56712/1‑233 (MQ=255)                                                                                                                                          gggTCCAGCAGACGCCGACGGGCGACGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGA‑AGCCGAACGCCCGGCACGTGCTCTGCCAGTTGATCAATGGCCTGATttgaacgccaggcgcggcaacggggttatcaactgctgattgcctgctcagaagatcagccagacaacgaaatgcggtgcattgagcaccttttacagcgtcaggttgatgccattcttgtttcgacgtcgttgcctcc                                                                                                            >  2:225749‑M1/1‑112 (MQ=255)                                                                                                                                          gggTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGATGTTCCAGGCGCTGTTTGCTACGACGGGCAAAATCCAGCGAGCAAATCACCAGCTg                                                                                                            >  1:294020/1‑251 (MQ=255)                                                                                                                                              ccAGCAGACGCAGATGGGTGAAGTGGGTTTCCCTCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGTCACGTGCCCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGATGTTCCAGGCGCTGTTTGCTACGGCGGGCAAAATCCAGCGAGCAAATCACCAGCTGTTCg                                                                                                        <  1:116941/251‑1 (MQ=255)                                                                                                                                              ccAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGATGTTCCAGGCGCTGTTTGCTACGACGGGCAAAATCCAGCGAGCAAATCACCAGCTGTTCg                                                                                                        >  1:157950/1‑251 (MQ=255)                                                                                                                                                         agacgGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGATGTTCCAGGCGCTGTTTGCTACGACGGGCAAAATCCAGCGAGCAAATCACCAGCTGTTCGGTGTCAAACgg                                                                                             <  1:142650/251‑1 (MQ=255)                                                                                                                                                                ggAAGTGGCCTTCCATCTCCAGCTGTTCCGGGGTCGCGGACAGC‑AGCAGAACGCCCGGCACGTGCTCTGACAGGTGGTCAATGGTCTGAGAGTCACGGCTTGGCGCATCTGCGCTCCACACCAGGGGATGCGCTTCATCGACCACCAGCAGGTCCCATTCTGCTTCACAGAGATGTTCCAGTCGCTGGTTGCTTCGGCGGGCAAAAGTCAGCGTGCTAATCACCGGCTGTTCGGTGTCAAACGTGTTGTaa                                                                                      <  2:152395/250‑1 (MQ=255)                                                                                                                                                                 gAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGATGTTCCAGGCGCTGTTTGCTACGACGGGCAAAATCCAGCGAGCAAATCACCAGCTGTTCGGTGTCAAACGGGTTGTa                                                                                       >  1:111992/1‑249 (MQ=255)                                                                                                                                                                    gTGGCTTTCCATCCCCAGCTGTGCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCTCACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGATGTTCCAGGCGCTGTTTGCTACGACGGGCAAAATCCAGCGAGCAAATCACCAGCTGTTCGGTGTCAAACGGGTTGTAAGCAt                                                                                  <  1:305218/251‑1 (MQ=255)                                                                                                                                                                             cATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGGCCCATTCGGCTTCACAGAGATGTTCCAGGCGCTGTTTGCTACGACGGGCAAAATCCAGCGAGCAAATCACCAGCTGTTCGGTGTCAAACGGGTTGTAAGCATCGTGCTg                                                                           >  2:96962/1‑249 (MQ=255)                                                                                                                                                                               tCCCCAGCTGTTCCGGGGTCGCGGTCTGC‑AGCAGTACGCCCGCCACCCGCTCTGCCAGTTGTTCAATGGCCTGATttgaacgccaggcgccgcaacgggggtatcaactgctgattgcctgctcagaagatcagacagacaacgaaatgcggtgcattgcgcaccttttacagcgtcagattggtgccattattgtttcgacgtcgtttcctcctgagcatcctttttatcaacgctgggctaacgacccg                                                                       >  2:147075‑M1/1‑75 (MQ=255)                                                                                                                                                                                  ccAGCTGGTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGATGTTCCAGGCGCTGTTTGCTACGACGGGCAAAATCCAGCGAGCAAATCACCAGCTGTTCGGTGTCAAACGGGTTGTAAGCATCGTGCTGAGCTTCg                                                                    <  2:43139/251‑1 (MQ=255)                                                                                                                                                                                        gTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGATGTTCCAGGCGCTGTTTGCTACGACGGGCCAAATCCAGCGAGCAAATCACCAGCTGTTCGGTGTCACACGGGTTGTAAGCATCGTGCTGAGCTTCGGCATa                                                               >  2:33684/1‑250 (MQ=255)                                                                                                                                                                                        gTTCCGGGGTCGCGGT‑TGCTAGCAGAACGCCCGGCGCGTGCTCGGCCAGTTGTTCAATGGCCTGACATTCACAGCTTGGCGCATCTTCGGTCCACACCAGGTCATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGGGATGTTCCAGTCGCTTTTTGCTATGTCGTGCAAATTCCAGCGAGCAAATCACCAGCTGTTCGGTGTCAAACGGGTTGGAAGCATCGTGCTGAGCTTCGGCAt                                                                <  2:6851/249‑1 (MQ=255)                                                                                                                                                                                                  cgcgGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTGCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGATGTTCCAGGCGCTGTTTGCTACGACGGGCAAAATCCAGCGAGCAAATCACCAGCTGTTCGGTGTCAAACGGGTTGTAAGCATCGTGCTGAGCTTCGGCATAACGCtcatca                                                     <  1:12523/250‑1 (MQ=255)                                                                                                                                                                                                                    cGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGATGTTCCAGGCGCTGTTTGCTACGACGGGCAAAATCCAGCGAGCAAATCACCAGCTGTTCGGTGTCAAACGGGTTGTAAGCATCGTGCTGAGCTTCGGCATAACGCTCATCATCAAATAGCGCAAAgcgc                                   <  1:9659/251‑1 (MQ=255)                                                                                                                                                                                                                             cGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGATGTTCCAGGCGCTGTTTGCTACGACGGGCAAAATCCAGCGAGCAAATCACCAGCTGTTCGGTGTCAAACGGGTTGTAAGCATCGTGCTGAGCTTCGGCATAACGCTCATCATCAAATAGCGCAAAGCGCAGGTTGaa                           >  2:275946/1‑250 (MQ=255)                                                                                                                                                                                                                                gCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCAGCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGATGTTCCAGGCGCTGTTTGCTACGACGGGCAAAATCCAGCGAGCAAATCACCAGCTGTTCGGTGTCAAACGGGTTGTAAGCATCGTGCTGAGCTTCGGCATAACGCTCATCATCAAATAGCGCAAAGCGCAGGTTGAAACg                        <  2:283225/250‑1 (MQ=255)                                                                                                                                                                                                                                        aGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGATGTTCCAGGCGCTGTTTGCTACGACGGGCAAAATCCAGCGAGCAAATCACCAGCTGTTCGGTGTCAAACGGGTTGTAAGCATCGTGCTGAGCTTCGGCATAACGCTCATCATCAAATAGCGCAAAGCGCAGGTTGAAACGGCGCAGCAt               <  2:14458/251‑1 (MQ=255)                                                                                                                                                                                                                                              tCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGATGTTCCAGGCGCTGTTTGCTACGACGGGCAAAATCCAGCGAGCAAATCACCAGCTGTTCGGTGTCAAACGGGTTGTAAGCATCGTGCTGAGCTTCGGCATAACGCTCATCATCAAATAGCGCAAAGCGCAGGTTGAAACGGCGCAGCATTTCTa          <  1:332748/250‑1 (MQ=255)                                                                                                                                                                                                                                               cAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGATGTTCCAGGCGCTGTTTGCTACGACGGGCAAAATCCAGCGAGCAAATCACCAGCTGTTCGGTGTCAAACGGGTTGTAAGCATCGTGCTGAGCTTCGGCATAACGCTCATCATCAAATAGCGCAAAGCGCAGGTTGAAACGGCGCAGCATTTCTAcc        >  1:51641/1‑251 (MQ=255)                                                                                                                                                                                                                                                     ccTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGATGTGCCAGGCGCTGTTTGCTACGACGGGCAAAATCCAGCGAGCAAATCACCAGCTGTTCGGTGTCAAACGGGTTGTAAGCATCGTGCTGAGCTTCGGCATAACGCTCATCATCAAATAGCGCAAGGCGCAGGTTGAAACGGCGCAGCATTTCTACCAGCCAc  <  1:47425/251‑1 (MQ=255)                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                      CGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTCCAGCAGACGCAGACGGGCGAAGTGGCTTTCCATCCCCAGCTGTTCCGGGGTCGCGGTCAGC‑AGCAGAACGCCCGGCACGTGCTCTGCCAGTTGTTCAATGGCCTGATATTCACGGCTTGGCGCATCTTCGCTCCACACCAGGTGATGCGCTTCATCGACCACCAGCAGGTCCCATTCGGCTTCACAGAGATGTTCCAGGCGCTGTTTGCTACGACGGGCAAAATCCAGCGAGCAAATCACCAGCTGTTCGGTGTCAAACGGGTTGTAAGCATCGTGCTGAGCTTCGGCATAACGCTCATCATCAAATAGCGCAAAGCGCAGGTTGAAACGGCGCAGCATTTCTACCAGCCAC  >  NC_000913/62130‑62623

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.