Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	2,317,225	IS2 (–) +5 bp	coding (2648‑2652/2850 nt)	rcsC ←	histidine kinase RcsC

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1651548	NA (NA)	42 (1.230)	40/486	0.1	97.6%	noncoding (706/706 nt)	IS2	repeat region
	?	NC_000913	= 2317229	1 (0.030)					coding (2648/2850 nt)	rcsC	histidine kinase RcsC
*	?	NC_000913	2317225 =	1 (0.030)	40 (1.180)	38/486	0.1	97.5%	coding (2652/2850 nt)	rcsC	histidine kinase RcsC
	?	NC_000913	= 2997691	NA (NA)					noncoding (1/1331 nt)	IS2	repeat region

AGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1651307‑1651548 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATGGACAGCTGCCTGTCGAAGCCGGTAACGCTGGATGTGATAAAACAGACGCTGACGTTATATGCCGAGAGGGTCAGGAAATCGCGGGATTCGTAGGACGGATAAGGCGTTTACGCCGCATCCGGCATTCAGTGCAAATGC  <  NC_000913/2317229‑2316982                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTACCGCT                                                                                                                                                                                                                                                 <  1:300340/251‑1                GGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGTGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTC                                                                                                                                                                                                                                  >  1:261936/1‑251                    TAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCc                                                                                                                                                                                                                              >  2:363958/1‑250                      GCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAAGCCAGTTACCGCTTGACGCAACGCATTCGTCAGT                                                                                                                                                                                                                            <  1:103729/251‑1                         GAGAGCTTCGCGAAAACGAGAAAGCGAGACTACATCAGTATCAGGCCAACACCAGACGGGTTAACGGCAGCAAAGAACCTTGCCGCGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGG                                                                                                                                                                                                                         >  2:41967/1‑251                                   cGAAAACGATAAAGCGTGACTACATCAGTATCAGGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTT                                                                                                                                                                                                               <  2:327302/250‑1                                     AAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGCCTGACGTT                                                                                                                                                                                                               >  1:327302/1‑249                                        ACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGG                                                                                                                                                                                                          <  1:132676/251‑1                                                 CGTGACTACATCAGCATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATCTCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTATGGAGATATAGGGGCAAATCCAGTTCACGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGG                                                                                                                                                                                                   >  2:62649/1‑249                                                          ATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCT                                                                                                                                                                                         >  1:272001/1‑250                                                                  CATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTT                                                                                                                                                                                 <  1:89782/250‑1                                                                                         CGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCT                                                                                                                                                         <  2:272001/251‑1                                                                                                    AACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTA                                                                                                                                              <  2:73931/251‑1                                                                                                     ACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTAT                                                                                                                                             <  1:363958/251‑1                                                                                                      CCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATG                                                                                                                                            >  2:270197/1‑251                                                                                                             GAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATCGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATGGACAGCT                                                                                                                                     >  2:43704/1‑251                                                                                                                  GTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCAAAGGGAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTAGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATGGACAGCTGCCTG                                                                                                                                >  1:310621/1‑251                                                                                                                                ACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGTTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATGGACAGCTGCCTGTCGAAGCCGGTAAC                                                                                                                  <  1:51725/251‑1                                                                                                                                           CCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATGGACAGCTGCCTGTCGAAGCCGGTAACGCTGGATGTG                                                                                                        <  1:307021/250‑1                                                                                                                                                  GTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATGGACAGCTGCCTGTCGAAGCCGGTAACGCTGGATGTGATAAAAC                                                                                                 >  1:339888/1‑250                                                                                                                                                  GTGCGCTGGGTTAGCGCTCGCCACGGGAATATCTGCGGCAGCGGGCGTGTAATGG‑GTTAAGTGATAACAGATGTCGGGAAATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTTACGTTGCCGGGAATCTGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATGGACAGCTGCCTGTCGAAGCCGGTAACGCTGGATGTGATAAAACA                                                                                                <  2:71/251‑1                                                                                                                                                     CGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAAGATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATGGACAGCTGCCTGTCGAAGCCGGTAACGCGGGATGTGATAAAACAGAC                                                                                             <  2:31388/251‑1                                                                                                                                                          GGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATGGACAGCTGCCTGTCGAAGCCGGTAACGCTGGATGTGATAAAACAGACGCTGA                                                                                        <  1:50839/251‑1                                                                                                                                                                  caCGCCACGGGAATATTTGCGGGAGCGGGCTTGTA‑TGGTGTTAAGTAATAAAAGATGTCTGGAAATATAGGTGCAAATCCAGTTACCGCTGGACGCAACTCATTCGTCAGTTAGGACTAACGGTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGGCTGGAGTCCGGTATGGACAGCTGCCTGTCGAAGCCGGTAACGCTGGATGTGATAAAACAGACGCTGACGTTATAT                                                                                <  2:79235/249‑1                                                                                                                                                                          GGGAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATGGACAGCTGCCTGTCGAAGCCGGTAACGCTGGATGTGATAAAACAGACGCTGACGTTATATGCCGAG                                                                          >  1:273493/1‑249                                                                                                                                                                           GGAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATCACAGATGTCTGGAAATATAGGGGCAAATACAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTT                                                                                                                                                                                 >  2:349455/1‑145                                                                                                                                                                           GGAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTGCCGCTTGACGCAACGCATTCGTCAGTTAGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTT                                                                                                                                                                                 <  1:349455/145‑1                                                                                                                                                                           GGAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATGGACAGCTGCCTGTCGAAGCCGGTAACGCTGGATGTGATAAAACAGACGCTGACGTTATATGCCGAGAGG                                                                       >  2:241742/1‑251                                                                                                                                                                            GAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAG                                                                                                                                                     >  2:193625/1‑172                                                                                                                                                                            GAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAG                                                                                                                                                     <  1:193625/172‑1                                                                                                                                                                             AATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGACATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATGGACAGCTGCCTGTCGAAGCCGGTAACGCTGGATGTGATAAAACAGACGCTGACGTTATATGCCGAGAGGGT                                                                     >  2:357873/1‑251                                                                                                                                                                                ATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATGGACAGCTGCCTGTCGAAGCCGGTAACGCTGGATGTGATAAAACAGACGCTGACGTTATATGCCGAGAGGGTC                                                                    >  1:67467/1‑249                                                                                                                                                                                             GGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATGGACAGCTGCCTGTCGAAGCCGGTAACGCTGGATGTGATAAAACAGACGCTGACGTTATATGCCGAGAGGGTCAGGAAATCGCGGGct                                                     >  2:52859/1‑249                                                                                                                                                                                                TTGTAATGG‑GTTAAGTGATAACAGAGGTCTGGAAATATAGGGGCAAATCCAGTTGCCGCGTGACGCAACGCATTCGTCTATTGGGACTGACGTTGCCGGTAAGTGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATGGACAGCTGCCTGTCGAAGCCGGTAACGCGGGATGTGATAAAACAGACGCTGACGTTATATGCCGAGAGGGTCAGGATAGCGCGGGATTC                                                   <  2:91062/250‑1                                                                                                                                                                                                 TGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATGGACAGCTGCCTGTCGAAGCCGGTA                                                                                                                    >  2:150393/1‑184                                                                                                                                                                                                 TGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATGGACAGCTGCCTGTCGAAGCCGGTA                                                                                                                    <  1:150393/184‑1                                                                                                                                                                                                    AATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTCCCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATGGACAGCTGCCTGTCGAAGCCGGTAACGCTGGATGTGATAAAACAGACGCTGACGTTATATGCCGAGAGGGTCAGGAAATCGCGGGATTCGTAGG                                              <  2:260061/251‑1                                                                                                                                                                                                                 GATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATGGACAGCTGCCTGTCGAAGCCGGTAACGCTGGATGTGATAAAACAGACGCTGACGTTATATGCCGAGAGGGTCAGGAAATCGCGGGATTCGTAGGACGGATAAGGCG                                  >  1:352567/1‑251                                                                                                                                                                                                                       AGATGGCTGGAAATATAGGGGCATATCCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAAGCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATGGACAGCTGCCTGTCGAAGCCGGTAACGCTGGATGTGATAAAACAGACGCTGACGTTATATGCCGAGAGGGTCAGGAAATCGCGGGATTCGTAGGACGGATAAGGCGGTTACG                            <  2:260565/251‑1                                                                                                                                                                                                                           GTCTGGAAATATAGGGGCAAATCCAGTTACCGCGGGACGCAACGCATTCGTCAGTTGGGACGTACGTTGCCGGGAATCGGAGTAACTGCTAATGCGTTGGCGGAAGAGAAGCAGCGGTGTCGGGAGGCCGGTATGGACAGCTGCCTGGCGAAGCCGGTAACGCTGGATGTGATAAAACAGACGCTGACGTTATATGCCGAGAGGGTCAGTAAATCGCGGGATTCGTAGGACGGAGAAGTCGTTTAGGCCGC                        <  2:205067/251‑1                                                                                                                                                                                                                               GGAAATATAGGGGCAAATCCAGTTACCGCGTGACGCAACGCATTCGGCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATGGACAGCTGCCTGTCGAAGCCGGTAACGCTGGAAGTGATAAAACAGACGCTTACGCTATATGCCGAGAGGGTCAGGAAATCGCGGGATTCGTAGGACGGATAAGGCGTTTACGCCGCATCC                    <  2:358299/251‑1                                                                                                                                                                                                                                                 CCAGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATGGACAGCTGCCTGTCGAAGCCGGTAACGCTGGATGTGATAAAACAGACGCTGACGTTATATGCCGAGAGGGTCAGGAAATCGCGGGATTCGTAGGACGGATAAGGCGTTTACGCCGCATCCGGCATTCAGTGCAAATGC  <  1:98440/251‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGG‑GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1651307‑1651548 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATGGACAGCTGCCTGTCGAAGCCGGTAACGCTGGATGTGATAAAACAGACGCTGACGTTATATGCCGAGAGGGTCAGGAAATCGCGGGATTCGTAGGACGGATAAGGCGTTTACGCCGCATCCGGCATTCAGTGCAAATGC  <  NC_000913/2317229‑2316982

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.