| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,995,620 | IS5 (–) +4 bp | intergenic (‑261/‑32) | uvrY ← / → yecU | DNA‑binding transcriptional activator UvrY/protein YecU |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1397238 | NA (NA) | 7 (0.950) | 6/328 | 0.1 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 1995623 | 0 (0.000) | intergenic (‑264/‑32) | uvrY/yecU | DNA‑binding transcriptional activator UvrY/protein YecU | |||||
| * | ? | NC_000913 | 1995620 = | 0 (0.000) | 5 (0.680) | 3/328 | 0.5 | 100% | intergenic (‑261/‑35) | uvrY/yecU | DNA‑binding transcriptional activator UvrY/protein YecU |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
GATAACGCTACTGATAGTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGGTCACGCCCGTCACCAACGGCTTACCGGATCGTTTCACAGTAAGCCCTACGATGAAATGTGACAAAAATTGACTTTATTCAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGCTTATGGTATACTCCGCCGCCTTAACATTTTTCACCGCAAATTTTCATTGCAACATGACGAGGAAAATAAATGAGTACGCCTGATTTTTCTACTGCCGAGAATAATCAAG > NC_000913/1995381‑1995857 | cagcggataaggtcgccggccattaccagccttggggtaaaacggctcgatgacttccaccatgtgttgccatggcagaatctgctccatgcgggacaagaaaatctctgttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctggtctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTAacccn > 1:13704‑M1/240‑250 (MQ=255) nttaAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGGCCACAGTTATGGTCACGCCCGTCACCAACGGCTTACCGGATCGTTTCACAGTAAGCCCTACGATGAAATGTGACAAAAATTGACTTTATTCAGCAAAAATGAAAATCAGCCCGCTGACTATGTAACATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagc < 1:98170‑M2/250‑69 (MQ=255) ggTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGGTCACGCCCGTCACCAACGGCTTACCGGATCGTTTCACAGTAAGCCCTACGATGAAATGTGACAAAAATTGACTTTATTCAGCAAAAATGAAAAGCAGCCCGCGGAATATGTAACATTAAggaaggtgcgaataagctgggaaattcttctcggctgacgcagtcatttcatttcttcatgtttgagccgattttttctcc > 1:117645‑M2/1‑170 (MQ=255) ctctcGTTTTTGTCAATTCGATTGTCCACAGTTATGGTCAAGCCCGTCACCACAGGCTTACCGGGTCGGTTCCCAGTAAGACCTACGATGAAATGTGACAACAATTGACTTTTTTCAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAAggaaggtgggaatacgcggggaaattcttttcggctgactcagtcatttcatttcttcatgtttgagccggttttttctcccgtaaatgccttg < 1:71633‑M2/250‑95 (MQ=255) ggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaacccttttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTGTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAg > 1:158876‑M1/126‑248 (MQ=255) cTACGATGAAATGTGACAAAAATTGACTTTATTCAGCACAAATGAAAATAAGCCCGCTGAATATGTAACATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatt < 1:142001‑M2/251‑178 (MQ=255) gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTtntagnnnnnccnnnnnnnnnn < 2:98323‑M1/96‑11 (MQ=255) gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTatttn > 1:98323‑M1/59‑177 (MQ=255) gctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGCACTGCCGATATCAAGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGCTTATGGTATACTCCGCCGCCTTAACATTTTTCACCGCAAATTTTCATTGCAACATGACGAGGAAAATAAATg < 1:48769‑M1/201‑1 (MQ=255) aaaTGAAAATCAGCCCGCTGAATATGTAACATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttataccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatc > 1:132755‑M2/1‑35 (MQ=255) aTCAGCCTGCTGAATATGTAACATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagcccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcagttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttg > 1:114882‑M2/1‑27 (MQ=255) gAATATGTAACATTAAggaaggtgcgaataagcggggaaattcttcgcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctcttccacttacgtatcatttggtcccgccgaaacaggtgggccagcgtgaataacatcgccagttggttatcgttt > 1:139809‑M2/1‑16 (MQ=255) | GATAACGCTACTGATAGTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGGTCACGCCCGTCACCAACGGCTTACCGGATCGTTTCACAGTAAGCCCTACGATGAAATGTGACAAAAATTGACTTTATTCAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGCTTATGGTATACTCCGCCGCCTTAACATTTTTCACCGCAAATTTTCATTGCAACATGACGAGGAAAATAAATGAGTACGCCTGATTTTTCTACTGCCGAGAATAATCAAG > NC_000913/1995381‑1995857 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |