| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,090,302 | Δ695 bp | [endA] | [endA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3090302 | 3090996 | 695 | 8 [0] | [0] 8 | [endA] | [endA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3090301 | 0 (0.000) | 8 (0.820) | 6/314 | 0.3 | 100% | intergenic (+49/‑46) | yggI/endA | protein YggI/DNA‑specific endonuclease I |
| ? | NC_000913 | 3090997 = | 0 (0.000) | coding (651/708 nt) | endA | DNA‑specific endonuclease I | |||||
CCATGAAGGTCGATTTCAAAGAAAAAGCTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGG‑CAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTC‑TTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCG > NC_000913/3090801‑3091218 | gaactgcaatccgttcgtcgcaacaccttcccctaccgctgcaagtgccaggagcatcagcttaccgtaggccgccataatcgcgtagttcgtggcgaggccgtctatcgctgtgttcactgcggtgaacagctggtttcgaaataaccatctgaactatcaggaactttcctgatctggctaattgcataccaaaGGGGCAGGGCCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAagag < 1:129031‑M2/55‑1 (MQ=255) cccgaccgctgcaagtgccaggagcagcagctgaccgtccgccgccataatcgcgtagttcgtggcgaggccgactatcgcggtgtgcactgcggtgaacagctggttgcgaaataaccatctgaactatcaggaactttccggatctggctgattgcataccaaaGGTGCAGGGCCAATCAGATCCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGc < 1:236487‑M2/56‑1 (MQ=255) ggcggtcagcaccggttctggtcgcgtagttcgtggcgaggccgtctatcgctgtgttcactgcggtgaacagctggttgcgaaataaccatctgaactatcaggaactttcctgatctggctgattgcataccaaaGGTGCAGGGCCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTC‑TTTTTGTTAACCCCTACCCCACGCGTACAACCGCgtn < 1:137436‑M2/114‑2 (MQ=255) cttaccgtacgccaccataatcgcgtagttcgtggcgaggccgtctatcgctgtgttcactgcggtgaacagctggttgcgaaataaccatctgaactatcaggaactttcctgatctggctgattgcataccaaaGGTGCAGGGCCAATCATAACCCGTATTTGCAACGCGCTTGCCAGGCGCGAAag < 1:90446‑M2/53‑1 (MQ=255) ggcgaggccgtctatcgctgtgttcactgcggtgaacagctggttgcgaaataaccatctgaactatcaggaactttcctgatctggctgattgcataccaaaGGTGCAGGGCCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTC‑TTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATc < 1:95300‑M2/147‑1 (MQ=255) gtgaacagctggttgcgaaataaccatctgaactatcaggaactttcctgatctggctgattgcataccaaaGGTGCAGGGCCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATACCCCGCATTTatc > 1:12496‑M2/73‑233 (MQ=255) ctttccggatctttctgattgcataccaaaGGTGCAGGGCCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGc < 1:123203‑M2/56‑1 (MQ=255) tcctgatctggctgattgcataccaaaGGTGCAGGGCCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATGC‑TTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGTGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTTACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCg < 1:124022‑M2/223‑1 (MQ=255) | CCATGAAGGTCGATTTCAAAGAAAAAGCTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGG‑CAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTC‑TTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCG > NC_000913/3090801‑3091218 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |