| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,583,432 | Δ3,267 bp | coding (64‑3330/3513 nt) | hsdR ← | type I restriction enzyme EcoKI endonuclease subunit |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4583432 | 4586698 | 3267 | 8 [0] | [0] 8 | hsdR | type I restriction enzyme EcoKI endonuclease subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4583431 | 0 (0.000) | 8 (0.810) | 8/316 | 0.1 | 100% | coding (3331/3513 nt) | hsdR | type I restriction enzyme EcoKI endonuclease subunit |
| ? | NC_000913 | 4586699 = | 0 (0.000) | coding (63/3513 nt) | hsdR | type I restriction enzyme EcoKI endonuclease subunit | |||||
AGCGCAGCCAACGCAGAGGCAGCCTGAAGGATGAAGTGTATACGTGTCAGGCCAGCTCGTCCCAGATA‑TAATCGCTGAATTTGCCCAGCAGGGTATCGAGATTATCGTCAAAGGTTCTTTGCAGCATCGCCTTCCCGCCGCGACGGTGGAAGTTGCCGGTTTTGAAGACATCGTCGTCGAGCACCACTTTCTCTTTCAGCGCCTGCGCTAAACGATCGAGCCAGCTTAATTGCTCGCTGCTCCAGTCGTTTTCGCCCTTAATGCGCGTCAGCGCGTGATCGACACGTTCCTCAAACGGTTTCAGCGCATCGCCCACCGCAGCGCGGCGAATATGACCAATCAGCCGGGCGGCGATATCTTCATTGCGCGTCTCTTTCCATGCTTTGCGCAGGGAAGATTCCTCAAAGTGCTGGCGGTCAAACCACTCCTGTAGCTCGACCA > NC_000913/4583203‑4583643 | aGCGCAGCCAACGCAGAGGCAGCCTGAAGGATGAAGTGTATACGTGTCAGGCCAGCTCGTACCAGATA‑TAATCGCTGAATTTGCCCAGCAGGGTATCGAGATTATCGTCAAAGGTTCTTTGCAGCATCGCCTTCCCGCCGCGACGGTGGAAGTTGCCGGTTTTGAAGACATCGTCGTCGAGCACCACTTTCTCTTTCAGCGCCTGCGCTAAACGATCGAGCCAGCTTAAggcgatggcataagtgaagtcg > 1:122426‑M1/1‑229 (MQ=255) ggaagcaaacgcagagGCAGCCTGAAGGAGGAATTGTATACGGGCCAGGCCAGCTCGTCCCAGATA‑TAATCGCTGAATTTGCCCAGCAGGGTATGGAGATAATCGTCAAAGGTTCTTTGCAGCATCGCCTTCCCGCCGCGACGGTGGAAGTTGCCGGTTTTGAAGACATCGTCGTCGAGCACCACTTTCTCTTTCAGCGCCTGCGCTAAACGATCGAGCCAGCTTAAggcgatggcataagtgaagtcgtt < 1:202752‑M1/244‑25 (MQ=255) gagGCAGCCTGAAGGATGAAGTGTATACGTGTCAGGCCAGCTCGTCCCAGATA‑TAATCGCTGAATTTGCCCAGCAGGGTATCGAGATTATCGTCAAAGGTTCTTTGCAGCATCGCCTTCCCGCCGCGACGGTGGAAGTTGCCGGTTTTGAAGACATCGTCGTCGAGCACCACTTTCTCTTTCAGCGCCTGCGCTAAACGATCGAGCCAGCTTAAggcgatggcataagtgaagtcgttgacgcccttcagg > 1:51770‑M1/1‑214 (MQ=255) gtATACGTGTCAGGCCAGCTCGTCCCAGATATTAATCGCTGAATTGGCCCAGCAGGGTATCGAGATTATCGTCAAAGGTTCTTTGCAGCATCGCCTTCCCGCCGCGACGGTGGAAGTTGCCGGTTTTGAAGACATCGTCGTCGAGCACCACTGTCTCTTTCAGCGCCTGCGCTAAACGATCGAGCCAGCTTAAggcgatggcataagtgaagtcgttgacgcccttcaggaattcaaaattggatttattc < 1:110252‑M1/251‑59 (MQ=255) ccnGCCNCNNCNNTGGNAGTTGCCGGTTTTGAAGACATNNTCGTCGAGCNCCACTTTCTCTTTCAGCGCCTGCGCTAAACGATCGAGCCAGCTTAAggcgatgncataagtganntcnttgacncnnntnnnganttcaaaattggatttattcntcnntgttatnaatccattgctgtgcgggcctgtcca < 2:51770‑M1/192‑97 (MQ=255) ccgcGACGGTGGAAGTTGCCGGTTTTGAAGACATCGTCGTCGAGCACCACTTTCTCTTTCAGCGCCTGCGCTAAACGATCGAGCCAGCTTAAggcgatggcataagtgaagtcgttgacgcccgtcaggaattcaaaatgggatttattcatcagtgttattaatccattgctgtgcgggcctgtccaaatatttaaggcccataacatcgcatcttagctttctgtacctttccgggcaatgaccacggt < 1:134118‑M1/251‑160 (MQ=255) gAAGACATCGTCGTGGATCCCCACTTTCTCTTTCAGCGCCTGCGCTAAACGATCGAGCCAGCTTAAggcgat < 1:104320‑M1/72‑7 (MQ=255) ctTTCAGCGCCTGCGCTAAACGATCGAGCCAGCTTAAggcgatggcataagtgaagtcgttgacgcccttcaggaattcaaaattggatttattcatcattgttattaatccattgctgtgcgggcctgtccaaatatttaaggcccataacatctcatcttatctttctgtacctttccgggcaatgaccacggtcacagcaactgactcatttctaacgtgttcgtctatttttgtagtgctatagt < 1:109711‑M1/249‑213 (MQ=255) | AGCGCAGCCAACGCAGAGGCAGCCTGAAGGATGAAGTGTATACGTGTCAGGCCAGCTCGTCCCAGATA‑TAATCGCTGAATTTGCCCAGCAGGGTATCGAGATTATCGTCAAAGGTTCTTTGCAGCATCGCCTTCCCGCCGCGACGGTGGAAGTTGCCGGTTTTGAAGACATCGTCGTCGAGCACCACTTTCTCTTTCAGCGCCTGCGCTAAACGATCGAGCCAGCTTAATTGCTCGCTGCTCCAGTCGTTTTCGCCCTTAATGCGCGTCAGCGCGTGATCGACACGTTCCTCAAACGGTTTCAGCGCATCGCCCACCGCAGCGCGGCGAATATGACCAATCAGCCGGGCGGCGATATCTTCATTGCGCGTCTCTTTCCATGCTTTGCGCAGGGAAGATTCCTCAAAGTGCTGGCGGTCAAACCACTCCTGTAGCTCGACCA > NC_000913/4583203‑4583643 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |