| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,583,432 | Δ3,267 bp | coding (64‑3330/3513 nt) | hsdR ← | type I restriction enzyme EcoKI endonuclease subunit |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4583432 | 4586698 | 3267 | 13 [0] | [0] 13 | hsdR | type I restriction enzyme EcoKI endonuclease subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4583431 | 0 (0.000) | 13 (0.780) | 13/292 | 0.2 | 100% | coding (3331/3513 nt) | hsdR | type I restriction enzyme EcoKI endonuclease subunit |
| ? | NC_000913 | 4586699 = | 0 (0.000) | coding (63/3513 nt) | hsdR | type I restriction enzyme EcoKI endonuclease subunit | |||||
ATCGTTATGATATTCGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACAAGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTCCGCCGCACAGGCGATGGCATAAGTGAAGTCGTTGACGCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCTAACGTGTTCGTCTATTT > NC_000913/4586462‑4586895 | ggtgaacgagcgcagccaacgcagaggcagcctgaaggatgaagtgtatacgtgtcaggccagctcgtcccagatataatcgctgaatttgcccagcagggtatcgagattatcgtcaaaggttctttgcagcatcgccttcccgccgcgacggtggaagttgccggttttgaagacatcgtcgtcgagcaccactttctctttcagcgcctgcgctaaacgatcgagccagcttaaGGCGATGGCATa > 1:102248‑M2/238‑249 (MQ=255) gtcaggccagctcgtcccagatataagcgctgaatttgcccagcagggtatcgagatgatcttcaaaggttctgtgcagcatcgccttcccgccgcgacggtggaagttgccggttttgaagacatcgtcgtcgatcaccactttctctttcagcgcctgcgctaaacgatcgagccagcttaaGGc < 1:247438‑M2/3‑1 (MQ=255) cagatataatcgctgaatttgcccagcagggtatcgagattatcgtcaaaggttctttgcagcatcgccttcccgccgcgacggtggaagctcccggttttgaagacatcgtcgtcgagcaccaatttctctttcagcgcctgcgctaaacgatcgagccagcttaaGGCGATGGCATAAGTGAAGTCGTTGACGCACTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCtgtg > 1:407590‑M2/168‑251 (MQ=255) cccgccgcgacggtggaagttgccggttttgaagacatcgtcgtcgagcaccactttctctttcagcgcctgcgctaaacgatcgagccagcttaaGGCGATGGCATAAGTGAAGTCGTTGACGCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAAcatc > 1:207023‑M2/97‑214 (MQ=255) gccgcgacggtggaagttgccggttttgaagacatcgtcggcgagcaccactttctctttcagcgcctgcgctaaacgatcgagccagcttaaGGCGATGGCATAAGTGAAGGCGTTGACGCCCTTCAGTAATTCAAAATTGGATTTATTCATCATTGTTAGTAATCCATTGCTGTGCGGGCCTGTTCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGAc < 1:279182‑M2/153‑1 (MQ=255) ggaagttgccggttttgaagacatcgtcgtcgagcacccctttctctttcagcgcctgcgctaaacgatcgagccagcttaaGGCGATGGCATAAGTGAAGTCGTTGACGCCCTTCAGGACTTCAAAATTGGCTTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGcaac > 1:67773‑M2/83‑231 (MQ=255) gtcgtcgagcaccactttctctttcagcgcctgcgctaaacgatcgagccagcttaaGGCGATGGCATAAGTGAAGTCGTTGACGCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATGTAAGGCCCATAACATCTCATCTTAGc < 1:143007‑M2/128‑1 (MQ=255) gtcgagcaccactttctctttcagcgcctgcgctaaacgatcgagccagcttaaGGCGATGGCATAAGTGAAGTAGTTGACGCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGCCCAAATATTTAATGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCACTGACCACGGTCACAGCAACTGACTCATTTCTAACGTGTTCGTCTAttt > 1:300586‑M2/55‑251 (MQ=255) tctttcagcgcctgcgctaaacgatcgagccagcttaaGGCGATGGCATAAGTGAAGTCGTTGACGCCCTTCAGGAATTCAAAATTGGNNTTATtcnnc > 2:25385‑M2/39‑99 (MQ=255) tctttcagcgcctgcgctaaacgatcgagccagcttaaGGCGATGGCATAAGTGAAGTCGTTGACGCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTAc < 1:25385‑M2/137‑1 (MQ=255) cgatcggnccagcttaaGGCGATGGCATAAGTGAAGTCGNTNACGCCCTTCAGGAATGCAAAATTGGATTTATTCATCATTGTTATTAATNCAGTGCTGTGNGGGNNTGTCNANANATTTAAGGCCCATAACATCTCATCTTAGCNTTCTGTACCTTTCCGGGCAATGANNACNNNCANNGCAAc < 2:317222‑M2/168‑1 (MQ=255) cgatcgagccagcttaaGGCGATGGCATAAGTGAAGTCGTTGACGCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGACTGTCCAAATATTTAAGGCCCATAACATCTCCTCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAAc > 1:317222‑M2/18‑185 (MQ=255) gagccagcttaaGGCGATGGCATAAGTGAAGTCGTTGACGCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCAc > 1:3899‑M2/13‑168 (MQ=255) | ATCGTTATGATATTCGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACAAGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTCCGCCGCACAGGCGATGGCATAAGTGAAGTCGTTGACGCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCTAACGTGTTCGTCTATTT > NC_000913/4586462‑4586895 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |