| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,326,889 | A→C | M16R (ATG→AGG) | ftsH ← | ATP‑dependent zinc metalloprotease FtsH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,326,889 | 0 | A | C | 100.0% | 14.2 / NA | 7 | M16R (ATG→AGG) | ftsH | ATP‑dependent zinc metalloprotease FtsH |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (6/1); total (6/1) | |||||||||||
CGACAACCTTGACGTTCTTGGTCAACAGGTTATCCAGTAATTTCGGATCCTGAACCGGAATGTAAGTGGTATAACGGTTACTATCTTTCTTGGTAACGTTGATTTCACGTCCGTTGATACGCGCTTCACGAACCTGGTCGTTATTGACCTCTTGTAGGAAGGTAGAGTAATCCACCTTACGGCCATTAGACTCGCTGGGCCCAAAGCTCTGGAATACTGACATCAGCACAACGGCAATGACCAGCCAGAGTATTAGGTTTTTCGCCATGTCACTCAAGGGATTAACCTCTTATTACAACTGTGTTAAAAACAGCGTCAGGATACTCTATATCCAGCATCTTTCAAACTTTCGTCTGAAATCTCCCGGTTAGGGTTTACGCCCGGTCGCTACAATATACACTTCCCGCGAACGTGCACGAGAAGAGTCCGGCTTACGAACTTTGACCTTC > NC_000913/3326668‑3327116 | cGACAACCTTGACGTTCTTGGTCAACAGGTTATCCAGCAATTTCGGATCCTGAACCGGAATGTAAGTGGAATAACGGTTACTATCTTTCTTGGTAACGTTGATTTCACGTCCGTTGATACGCGCTTCACGAACCTGGTCGTTATTGACCTCTTGTAGGAAGGTAGAGTAATCCACCTTACGGCCATTAGCCTCGCTGGGCCCAAAGCTCTGGAATACTGACCTCAGCACAACGGCAATGAcccgcccg > 1:128546/1‑246 (MQ=255) gAACCGGAATGTAAGTGGTATAACGGTTACTATCTTTCTTGGTAACGTTGATTTCACGTCCGTTGATACGCGCTTCACGAACCTGGTCGTTATTGACCTCTTGTAGGAAGGTAGAGTAATCCACCTTACGGCCATTAGACTCGCTGGGCCCAAAGCTCTGGAATACTGACCTCAGCACAACGGCAATGACCAGCCAGAGTATTAGGTTTTTCGCCATGTCACTCAAGGGATTAACCTCTTATTACAACtgt > 1:86859/1‑251 (MQ=255) tGGTAACGTTGATTTCACGTCCGTTGATACGCGCTTCACGAACCTGGTCGTTATTGACCTCTTGTAGGAAGGTAGAGTAATCCACCTTACGGCCATTAGACTCGCTGGGCCCAAAGCTCTGGAATACTGACCTCAGCACAACGGCAATGACCAGCCAGAGTATTAGGTTTTTCGCCATGTCACTCAAGGGATTAACCTCTTATTACAACTGTGTTAAAAACAGCGTCAGGATACTCTATATCCAGCATCtt > 1:111668/1‑251 (MQ=255) ctTGTAGGAAGGTAGCGTAATCCGCCTTACGGCCATGAGACTCGCTGGGCCAAAAGCTATGGAATACTGACCTCAGCACAAAGGCAATGACCAGCCAGAGTATTAGGTTTTTCGCCATGCCACTCAAGGGATTAACCTCTTATTACAACTGTGTTAAAAACAGCGTCAGGATACTCTATATCCAGCATCTTTCAAACTTTCGTCTGAAAtc > 1:100733/1‑211 (MQ=255) gCTGGGCCCAAAGCTCTGGAATACTGACCTCAGCACAACGGCAATGACCAGCCAGAGTATTAGGTTTTTCGCCATGTCACTCAAGGGATTAACCTCTTATTACAACTGTGTTAAAAACAGCGTCAGGATACTCnatannnnn > 2:163930/1‑137 (MQ=255) gCTGGGCCCAAAGCTCTGGAATACTGACCTCAGCACAACGGCAATGACCAGCCAGAGTATTAGGTTTTTCGCCATGTCACTCAAGGGATTAACCTCTTATTACAACTGTGTTAAAAACAGCGTCAGGATACTCTATATCCan < 1:163930/142‑2 (MQ=255) gCCCAAAGCTCTGGAATACTGACCTCAGCACAACGGCAATGACCAGCCAGAGTATTAGGCTTTTCGCCATGTCACTCAAGGGATTAACCTCTTATTACACCTGTGTTAAAAACAGCGTCAGGATACTCTCTATCCAGCATCTTTCAAACTTTCGTCTGAAATCTCCCGGTTAGGGTTTACGCCCGGTCGCTACAATATACACTTCCCGCGAACGTGCACGAGAAGAGTCCGGCTTACGAACTTTGACCTTc > 1:161152/1‑251 (MQ=255) | CGACAACCTTGACGTTCTTGGTCAACAGGTTATCCAGTAATTTCGGATCCTGAACCGGAATGTAAGTGGTATAACGGTTACTATCTTTCTTGGTAACGTTGATTTCACGTCCGTTGATACGCGCTTCACGAACCTGGTCGTTATTGACCTCTTGTAGGAAGGTAGAGTAATCCACCTTACGGCCATTAGACTCGCTGGGCCCAAAGCTCTGGAATACTGACATCAGCACAACGGCAATGACCAGCCAGAGTATTAGGTTTTTCGCCATGTCACTCAAGGGATTAACCTCTTATTACAACTGTGTTAAAAACAGCGTCAGGATACTCTATATCCAGCATCTTTCAAACTTTCGTCTGAAATCTCCCGGTTAGGGTTTACGCCCGGTCGCTACAATATACACTTCCCGCGAACGTGCACGAGAAGAGTCCGGCTTACGAACTTTGACCTTC > NC_000913/3326668‑3327116 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |