Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 66,227 | A→G | G108G (GGT→GGC) | araD ← | L‑ribulose‑5‑phosphate 4‑epimerase AraD |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 66,227 | 0 | A | G | 100.0% | 25.4 / NA | 11 | G108G (GGT→GGC) | araD | L‑ribulose‑5‑phosphate 4‑epimerase AraD |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (8/3); total (8/3) |
GCACCGCATCTTCGGCATTTTTGCCCCATGCAAACGGGCCGTGGGAATGGACCAGAACGCCGGGCATTTGCGCTGCATCGATACCCTGTTTTTCAAAGGTTTCTACGATGACGTTACCGGTTTCCCACTCATATTCGCCGTTGATTTCTGCGTCGGTCATTTTGCGGGTGCAGGGAATGGTGCCGTAGAAATAGTCGGCGTGGGTGGTGCCGGTTGCTGGAATCGACTGACCCGCCTGCGCCCAGATGGTGGCGTGGCGCGAGTGCGTATGCACAATGCCGCCAATGGAGGGGAATGCCTGATAGAGCAGCCGGTGAGTTGGCGTGTCGGAGGAGGGCTTTTTCGTACCTTCAACCACTTCACCGGTTTCGATGCTAACCACGACCATATCGTCAGCGGTCATGACGCTGTAATCGACGCCGGAAGGTTTGATCACAAAGACGCCGCGCTCGCGATCAACGGC > NC_000913/65998‑66460 | gCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAGGACGCCGGGCAGTTGCGCTGCATCGATACCCTGTTTTTCGAAGGTTTCTACGATGACGTTACCGGTTTCCCACTCATATTCACCGTTGATTTCTGCGTCGGTCATTTTGCGGGTGCAGGGAATGTTGCCGTAGAAATAGTCGGCGTGGTTGGTGCCGGTTGCTGTAATCGACTGGCCCGCCTGCGCCCAGAtagtgn < 1:24500/251‑2 (MQ=255) cGCCGGGCATTTGCGCTGCATCGATACCCTGTTTTTCGAAGGTTTCTACGATGACGTTACCGGTTTCCCACTCATATTCACCGTTGATTTCTGCGTCGGTCATTTTGCGGGTGCAGGGAATGGTGCCGTAGAAATAGTCGGCGTGGGTGGTGCCGGTTGCTGGAATCGACTGGCCCGCCTGCGCCCAGATAGTGGCGGGGCGCGAGGGTGTGTGCACAATGCCGCCAATGGACGGGAATGCCTGAAAGagc > 1:73746/1‑251 (MQ=255) ggTTTCTACGATGACGTTACCGGTTTCCCACTCATATCAATAGTTGATTTATGGGTCGGTCTTTTTGCGGGTGCAGGGAATGGTGACGTAGAATTAGTCGGCGTGGGTGGCGCCGGTTGCCGGAATCGACTGGCCCGCCTGCACCCAGATAGTGGCGTGGCGCGCGTGTGTGTGCAAAATGCAGCCAAttg > 1:260852/1‑189 (MQ=255) cGGTTTACCACTCATATTCACAGTTGATTTCTGCGTCGGTCATTTTGCGGGTGCAGGGAATGGTGCCGAAGAACTAGTCGGCGTGGGTGGTGCCGGTTGCTGGAATCGACTGGCACGCCTGCGCCCAGATAGTNGCGNNNnncgnnnnnn > 2:172975/1‑144 (MQ=255) cATATTCACCGTTGATTTCTGCGTCGGTCATTTTGCGGGTGCAGGGAATAGTGCCGTAGAAATAGTCGGCGTGGGTGGTGCCGGTTGCTGGAATCGACTGGCCCGACTGCGCCCAGATAGTGGCGTGGCGCGTGTGGGTGTGCACAATGCCGCCAATGGACGGGAATGCCTGATAGAGTAGTCGGTGGGTTGGCGGATCGGGGGAGGGGTTTTTCGACCCTTCAACCACTTCACCGGTTTCGATGCCAAcc > 1:254727/1‑251 (MQ=255) aTTTCTGCGTCGGTCATTTTGCGGGGGCAGGGAATGGTGCCGTAGAAATAGTCGGCGTGGGTGGTGCCGGTTGCTGGAATCGACTGGCCCGCCTGCGCCCAGATAGTGGCGTGGCGCGAGTGTGTGTGCACAATGCCGCCAATGGACGGGAATGCCTGATATAGCAGTCGGTGAGTTGGCTTATCGGAGGAGGGCTTGTTCGCACCTTCAACCACtt < 1:83302/217‑1 (MQ=255) gCGTCGGTCATTTTGCGGGTGCAGGGAATGGTGCCGTAGAAATAGTCGGCGGGGGTGGTGCCGGTTGCTGGAATCGACTGGCCCGCCTGCGCCCAGATAGTGGCGTGGCGCGAGTGTGTGTGCACAATGCCGCCAATGGACGGGAATGCCTGATAGAGCAGTCGGTGAGTTGGCGTATCGGAGGAGTGCTTTTTCGCACCTTCAACCACTTCACCGGTTTCGATGCTAACCACGACCATATCGTCAgn < 1:172975/248‑2 (MQ=255) ggTCATTTTGCGGGTGAAGGGAATGGTGCCGTAGAAATAGTCGGCGTGGGTGGTGCCGGTTGCTGGAATCGACTGGCCCGCCTGCGCCCAGATAGTGGCGTGGCGCGAGTGTGTGTGCACAAt > 1:212432/1‑123 (MQ=255) cATTTTGTGGGTGCAGGGAATGGTGCCGTAGAAATAGTCGGCGTGGGTGGTGCCGGTTGCTGGAATCGACTGGCCCGCCTGCGCCCAGATAGTGGCGTGGCGCGAGTGTGTGTGCCCAATGCCGCCAATGGACGGGAATGCCTGATAGagc > 1:229716/1‑151 (MQ=255) gCCGGTTGCTGGAATCGACTGGCCCGCCTGCGCCCAGATAGTGGCGTGGCGCGAGAGAGTGTGCACAATGCCGCCAATGGACGGGGATGCCTGATAGAGCAGGCGGGGGGTTGGCGTATCGGGGGAGGGCTTTTTCGCACCTTCAACCACTTCACCGGTTTCGATGCTAACCACGACCATATCGTccg > 1:114732/1‑186 (MQ=255) nttGCTGGATTCGACTGGCACGCCTGCGCCCAGATAGTGGCGTGGTGCGCGTGCGTGTGAACAATGCCGACAAAGGACGGGAATGCCTGATAGAGCAGGCGGTGAGTTGGCGTATCGGAGGAGGGGTTTTTCGCACCTTCAACCAATTCACCGGTTTCGATGCTAACAACGACCATATCGTCGGAGGTCATGATGATGCAATAGACGACGGCAGGTTTGATCACAAAGACGCCGCGCTCGAGATCCACggg > 1:51665/2‑250 (MQ=255) | GCACCGCATCTTCGGCATTTTTGCCCCATGCAAACGGGCCGTGGGAATGGACCAGAACGCCGGGCATTTGCGCTGCATCGATACCCTGTTTTTCAAAGGTTTCTACGATGACGTTACCGGTTTCCCACTCATATTCGCCGTTGATTTCTGCGTCGGTCATTTTGCGGGTGCAGGGAATGGTGCCGTAGAAATAGTCGGCGTGGGTGGTGCCGGTTGCTGGAATCGACTGACCCGCCTGCGCCCAGATGGTGGCGTGGCGCGAGTGCGTATGCACAATGCCGCCAATGGAGGGGAATGCCTGATAGAGCAGCCGGTGAGTTGGCGTGTCGGAGGAGGGCTTTTTCGTACCTTCAACCACTTCACCGGTTTCGATGCTAACCACGACCATATCGTCAGCGGTCATGACGCTGTAATCGACGCCGGAAGGTTTGATCACAAAGACGCCGCGCTCGCGATCAACGGC > NC_000913/65998‑66460 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |