| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 679,349 | Δ8,502 bp | IS5‑mediated | [ybeT]–gltI | [ybeT], ybeU, djlC, hscC, rihA, gltL, gltK, gltJ, sroC, gltI |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 679349 | 688879–687846 | 8498–9531 | 16 [0] | [1] 2 | [ybeT]–[insH3] | [ybeT],ybeU,djlC,hscC,rihA,gltL,gltK,gltJ,sroC,gltI,[insH3] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 679348 | 0 (0.000) | 16 (1.370) | 12/304 | 0.1 | 100% | coding (59/555 nt) | ybeT | Sel1 repeat‑containing protein YbeT |
| ? | NC_000913 | 687851 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
CGCTGATTGCTCATACCAGTATCTCGCCTGTGTATAATCCAGTGGTTTACCGTCGCTACCATGAAGATAAAATTCTCCAAGGCGATATTGCGACGTTGAGTGACCATGAATCGCGGAAAGCTCCGTGGCTGCCGTGGTGAATGGAAGACTGCCCGGTGAGCTTAAATAATCAAAGGCATAATTCACCATGGCTTTATCACGCAACGTCGTTTTCTTGGGTTGGCTAATACAGGTAATTGCTGCAACTATAAAAATTGCGAATATATACATTAATTTTTTATTCATGTGTGAATGCTTCGATTTTCTTTTTATTTTGAAAGCGTCAAGTTTATACTCATCAATAATAAAAAAGTAGTCAGTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTT > NC_000913/679122‑679535 | cGCTGATTGCTCATACCAGTATCTCGCCTGTGTATAATCCAGTGGTTTACCGTCGCTACCATGAAGATAACATTCTCCAAGGCGATATTGCGACGTTGAGTGACCATGAATCGCGGACAGCTCCGTGGCTGCCGTGGTGAATGGAAGACTGCCCGGTGAGCTTAAATAATCAAAGGCATAATTCACCATGGCTTTATCACGCAACGTCGTTTTCTTGGGTTGGCTAAggaaggtgcgaataagcggggaa > 1:114605‑M1/1‑227 (MQ=255) ccGTCGCTACCATGACGATAAAATTCTCCAAGGAGATATTGCGACGTTGAGTGACCATGAATCGCGGAAAGCTCCGTGGCTGCCGTGGTGAATGGAAGACTGCCCGGTGAGCTTAAATAATCAAAGGCATAATTCACCATGGCTTTATCACGCAACGTCGTTTTCTTGGGTTGGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatt > 1:75602‑M1/1‑178 (MQ=255) ccATGAAGATAAAATTCTCCAAGTGGATATTGCGACGTTGAGTGTCCATGAATCGCGGAAAGCTCCGTGGCTGCCGTGGTGAATGGAAGACTGCCCGGTGAGCTTAAATAATCAAAGGCATAATTCACCATGGCTTTATCACGCATCGTCGTTTTCTTGGGTTGGCTAAggaaggtgcgaataagcggggaaattcttctctgctgactcagtcatttcatttcttcatgtttgagccgattttttctccc < 1:214381‑M1/251‑83 (MQ=255) gTGACCATGAATCGCGGAAAGCTCCGTGGCTGCCGTGGTGAATGGAAGACTGCCCGGTGAGCTTAAATAATCAAAGGCATAATTCACCATGGCTTTATCACGCAACGTCGTTTTCTTGGGTTGGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgcc > 1:194824‑M1/1‑128 (MQ=255) gCTCCGTGGCTGCCGTGGTGAATGGAAGACTGCCCGGTGAGATTAAATACTCCCAGGCATAATTCACCATGGCTTTATCACGCAACGTCGTTTTCTTGGGTTGGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcc > 1:184952‑M1/1‑108 (MQ=255) gAATGGAAGACTGCCCGGTGAGCTTAAATAATCAAAGGCATGATTCACCATGGCTTTATCACGCAACGTCGTTTTCTTGGGTTGGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctc < 1:20282‑M1/250‑162 (MQ=255) tGGAAGACTGCCCGGTGAGCTTAAATAATCAAAGGCATAATTCACCATGGCTTTATCACGCAACGTCGTTTTCTTGGGTTGGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagn < 1:173746‑M1/154‑69 (MQ=255) tGGAAGACTGCCCGGTGAGCTTAAATAATCAAAGGCATAATTCACCATGGCTTTATCACGCAACGTCGTTTTCTTGGGTTGGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatntcannnnntcnnnnnnnnnn > 2:173746‑M1/1‑86 (MQ=255) gAGCTTAAATNANCAAAGGCATAATTCACCATGGCTTTATCACGCAACGTCGTTTTCTTGGNTTGGCTAAggnaggnncgaanangnggggaaattcttctcggctgactcagtcanttcatttcttcatgtttgagccgnnttnnnctnncgtta < 2:204090‑M1/156‑87 (MQ=255) gAGCTTAAATACTCAAAGGCATAATTCACCATGGCTTTATCACGCAACGTCGTTTTCTTGGGATGGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtta > 1:204090‑M1/1‑70 (MQ=255) aaTTCACCATGGCTTTATCACGCAACGTCGTTTTCTTGGGTTGGCTAAggaaggtgcgaataagcggggaaattcttctcgg < 1:6080‑M1/82‑35 (MQ=255) aaTTCACCATGGCTTTATCACGCAACGTCGTTTTCTTGGGTTGGCTAAggaaggtgcgaataagcggggaaattcttctcgg > 2:6080‑M1/1‑48 (MQ=255) aTCACGCAACGTCGTTTTCTTGGGTGGGCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgacttgaatcagcntatnnnnnccnnnnnnnnnn > 2:164831‑M1/1‑32 (MQ=255) gtcgtTTTCTTGGGTTGGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttgttagtgagatctctcccactgacgtatcatttggtccgccn < 1:50694‑M1/209‑188 (MQ=255) gtTTTCTTGGGTTGGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctn < 1:222429‑M1/99‑81 (MQ=255) tCTTGGGTTGGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttctncgcnnnnna > 2:169473‑M1/1‑15 (MQ=255) | CGCTGATTGCTCATACCAGTATCTCGCCTGTGTATAATCCAGTGGTTTACCGTCGCTACCATGAAGATAAAATTCTCCAAGGCGATATTGCGACGTTGAGTGACCATGAATCGCGGAAAGCTCCGTGGCTGCCGTGGTGAATGGAAGACTGCCCGGTGAGCTTAAATAATCAAAGGCATAATTCACCATGGCTTTATCACGCAACGTCGTTTTCTTGGGTTGGCTAATACAGGTAATTGCTGCAACTATAAAAATTGCGAATATATACATTAATTTTTTATTCATGTGTGAATGCTTCGATTTTCTTTTTATTTTGAAAGCGTCAAGTTTATACTCATCAATAATAAAAAAGTAGTCAGTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTT > NC_000913/679122‑679535 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |