| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,379,830 | IS5 (+) +4 bp | coding (811‑814/1296 nt) | menF ← | isochorismate synthase MenF |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 10 (0.860) | 6/302 | 0.4 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2379830 = | 0 (0.000) | coding (814/1296 nt) | menF | isochorismate synthase MenF | |||||
| * | ? | NC_000913 | = 2290113 | NA (NA) | 14 (1.200) | 12/304 | 0.1 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 2379833 | 0 (0.000) | coding (811/1296 nt) | menF | isochorismate synthase MenF | |||||
CGCGCGGTAAGCCAGCAACTGCTGCCGTTGGCTGCAACTGATGTAAACAGATCACATCATCCGCTTTGTTGAGTGAAGTCCAGATACAGCGGCGAAGATGCTGCACTTTACGCAGACGCAGTACCTGCGGCGGTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAGAGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGT > NC_000913/2379593‑2380055 | gaaaaacgataaccaactggcgatgttattcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaattgccccgcttattcgcaccgtccCTAACTGCtgcgn < 1:80880‑M2/13‑2 (MQ=255)gaaaaacgataaccaactggcgatgttattcacgctggccaacctgtttcgggcggaccaaatgagacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaatgcagttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTGctgcgac < 1:264804‑M2/14‑3 (MQ=255) gCCAGCAACTGCTGCCGTTGGCTGCAACTGAGGTAAACAGATCACATCATCCGCTTTGTTGAGTGAAGTCCAGATACAGCGGCGAAGATGCTGCACTTTACGCAGACGCAGTACCTGCGGCGGTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAAggaaggtgcgaacaagtccc > 1:187547‑M2/1‑231 (MQ=255) nagCAACTGCTGCCGTTGGCTGCAACTGATGTAAACAGATCACATCATCCGCTTTGTTGAGTGAAGTCCAGATACAGCGGCGAAGATGCTGCACTTTACGCAGACGCAGTACCTGCGGCGGTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAACCACTCTCCTACggaaggtgcgaacaagtccctg < 1:221764‑M2/250‑23 (MQ=255) gtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGcc > 1:195517‑M2/166‑215 (MQ=255) actaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgatgcaaggcatttacgtgagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACt < 1:238215‑M2/41‑1 (MQ=255) aTGCTGCACTTTACGCAGACGCAGTACCTGCGGCGGTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagc > 1:224678‑M2/1‑144 (MQ=255) cgcagacgcagTACCTGCGGCGGTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTTCACCACCAGCATGTTCTCGCGATGGTTTTTATCATCCGCCCTCAGCCACTCTCCTAAg < 1:209218‑M2/132‑2 (MQ=255) cgcagacgcagTACCTGCGGCGGTAAAACATCCAGCGNCTGGGTATCGNCCTNNAATCNTNGNCAGATATCTTCCACCACCAGCATGTTCTCNCGCTGGTTTTTATCATCCGCCATNNGCNNNTCNNCTAAg > 2:209218‑M2/1‑131 (MQ=255) aaagggcgaagaaacggcctaaataggctgattcaagacatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgccccttccCTACCTGCTGCGCCTTCTTATCATCAGGATTATTTGCTACTGTACCCGCCAGCGCTTCAGTACGCAGCTCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAGAGCCAAGAAAAGCattttn < 1:164083‑M2/124‑2 (MQ=255) gtgagaaaaaatcggctcaaacatgaagaaatgaaatgcctgagtcagccgagaagcatttccccgcttattcgcaccttccCTAACTGCTGCGCCTGCTTATCATCAGGCTTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGACGAGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAACATGGTAGCAATTCAGATTCAGTcg > 1:253158‑M2/83‑251 (MQ=255) gCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGCTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCCCTCTCCTAAggaaggtgcggacaagtacctgatctgagatcatgtttgtcatctggagccatagaacagggttcttcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaa < 1:275669‑M2/195‑113 (MQ=255) tcaaacatgaagaaatgaaatgactgagtcagccgagaagactttccccgcttattcgcaccttccCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAGAGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCcatc > 1:255016‑M2/67‑251 (MQ=255) gaagaaatgaactgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCttt > 1:58505‑M2/59‑131 (MQ=255) ttCCACCACCAGCATGTTCTCGCGCTTGTTTTTATCATCCGCCATCAGCCACTCTCCTAAggaaggt > 1:235327‑M2/1‑60 (MQ=255) ttCTCGCGCTGGTTTTTATCATCCGCCCTCAGCCACTCTCCTAAggaaggagcgcacaagtccctgatatgagatcctgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcnccgnnnnngannnnnn < 2:166119‑M2/150‑107 (MQ=255) cgcTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatt < 1:8847‑M2/175‑138 (MQ=255) cgagaagaatttccccgtttattcgccctttccCTAACGGCTGCGCCTGCTTATCACGAGGATTATTTGCTCCGGTGCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAGAGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGc < 1:212235‑M2/218‑1 (MQ=255) tATCATCCGCCATCATCCACTCTCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggan > 1:166119‑M2/1‑28 (MQ=255) catcCGCCATCAGCCACTCTCCTAAggaaggtgcgaacaagtccctgatatgagatnatgnttgtnatntggagccatagaacanggttcatcatgagtcatcaacttaccttcgccgacagtgaattcnncnnnantcgccgtc > 2:193061‑M2/1‑25 (MQ=255) catcCGCCATCAGCCACTCTCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatatggagccatagaacagggttcataatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc < 1:193061‑M2/145‑121 (MQ=255) cccgcttattcgcaccttccCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAGAGCCAAGAAAAGCAttt > 1:62839‑M2/21‑142 (MQ=255) gCCACTCTCCTAAggaaggtgcgaacaagtcactgctatgagatcatgtttgtcatctggcgccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagta < 1:90751‑M2/124‑112 (MQ=255) ctcCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggtttcatcatgagtcatcaacgtaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggttgaagtcatcg > 1:58410‑M2/1‑7 (MQ=255) | CGCGCGGTAAGCCAGCAACTGCTGCCGTTGGCTGCAACTGATGTAAACAGATCACATCATCCGCTTTGTTGAGTGAAGTCCAGATACAGCGGCGAAGATGCTGCACTTTACGCAGACGCAGTACCTGCGGCGGTAAAACATCCAGCGTCTGGGTATCGGCCTGTAATCGTTGACAGATATCTTCCACCACCAGCATGTTCTCGCGCTGGTTTTTATCATCCGCCATCAGCCACTCTCCTAACTGCTGCGCCTGCTTATCATCAGGATTATTTGCTACTGTTCCCGCCAGCGCTTCAGTACGCAGCGCTTTGTCACGCCGCCGCCATAACCGTTCCGGTGAAGAGCCAAGAAAAGCATTTTCGCCATCAAAGGCCATGTAAAAATGGTAGCAATTCAGATTCAGTCGACGACTGGCAGCCATCATCGCCGCCGCGTTGACCGGACTTGCGAAATGCAGGTCAGT > NC_000913/2379593‑2380055 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |