| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,000,811 | IS1 (+) +8 bp | coding (207‑214/552 nt) | fliZ ← | DNA‑binding transcriptional regulator FliZ |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1978503 = | NA (NA) | 12 (1.040) | 12/302 | 0.1 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 2000811 = | 0 (0.000) | coding (214/552 nt) | fliZ | DNA‑binding transcriptional regulator FliZ | |||||
| * | ? | NC_000913 | = 1979270 | NA (NA) | 13 (1.120) | 9/302 | 0.2 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 2000818 | 0 (0.000) | coding (207/552 nt) | fliZ | DNA‑binding transcriptional regulator FliZ | |||||
TAATTGTTGGTGCTGGTGGTGGGCAGCCACGGGGCGAGGATTTCATCAAGGAAACCGTCCTGCAGCTGATCGAGGGAAATATTTTGCTCGTGTAGATGATTCCCCAAACGGCGCAAACGAACGACATATTCACGCACCGTACCTGGGCTCATTTCAGTTTGCTCAAAAAGAAATTGCTTAAAGCCGATAATATCGAAAAAATCACTCTGCGTTTTGCAATGTAAATCACCGCAAAATCGGCACAATGCCGCCCATGATTTTTGTTCCGTTTGCCAGCCATTTTCATCAAGCAGCGTGTCCAGGCGGGAAATCTCGATTTTATTCACTATTTTGCCGTCGCGAACTAAGGTAATGCGATCGAGTAATTTACGGCAATGCGCGCAATGGGTCTGGCTGTGTTTAAAGTCTTTAAGATAGCGGCTTAATGGCCGTCTTTTCAGGTGCTGCACCATCATTAAGAACTCCTGGTAGTCAAAGTTAAAGTGCGG > NC_000913/2000570‑2001057 | tgacgtggtgatatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccACAATgccg < 1:146920‑M2/9‑1 (MQ=255) cGAGGATTTCATCAAGGAAACCGTCCTGCAGCTGATCGAGGGAAATATTTTGCTCGTGTAGATGATTCCCCAAACGGCGCAAACGAACGACATATTCACGCACCGTACCGGGGCTCATTTCAGTTTGCTCAAAAAGAAATTGCTTAAAGCCGATAATATCGAAAAAATCACTCTGCGTTTTGCAATGTAAATCACCGCAAAATCGGCACAATGCCggtgatgctgccaacttactgatttagtgtatgatg > 1:144156‑M2/1‑215 (MQ=255) gaatcccgcctgaagggaaagctgaacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccACAATGCCGCCCATGATTTTTGTTCCGTTTGCCAGCCATTTtcatca > 1:229247‑M2/202‑248 (MQ=255) ccTGCAGCTGATCGAGGGAAATATTTTGCTCGTGTAGATGATTCCCCAAACGGCGCAAACGAACGACATATTCACGCACCGTACCTGGGCTCATTTCAGTTTGCTCAAAAATAAAGTGCTTAAAGCCGATAATATCGAAAAAATCACGCTGCGTTGTGCAATGTAAATCACCGCAAAATCGGCACAATGTCggtgatgctgtcaacttactgatttagtgtatgatggtgtttttgaggtgctccagtgg > 1:40132‑M2/1‑191 (MQ=255) gATCGAGGGAAATATTTTGCTCGTGTAGATGATTGCCCAAACGGCGCAAACGAACGACATATTCACGCACCGTACCTGGGCTCATTTCAGTTTGCTCAAAAAGAAATTGCTTAAAGCCGATAATATCGAAAAAATCACTCTGCGTTTTGCAATGTAAATCACCGCAAAATCGGCACAATGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtt > 1:35986‑M2/1‑182 (MQ=255) gATCGAGGGAAATAGTTTGCTCGTGTAGATGATTTCCCAAACGGCGCAAACGAACGACATATTCACGCACCGTACCTGGGCTCATTTCAGTTTGCTCAAAAAGAAATTGCTTAAAGCCGATAATATCGAAAAAATCACTCTGCGTTTTGCAATGTAAATCACCGCAAAATCGGCACAATGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtt > 1:35991‑M2/1‑182 (MQ=255) gtAGATGATTCCCCAAACGGCGCAAACGAACGACATATTCACGCACCGTACCTGGGCTCATTTCAGTTTGCTCAAAAAGAAATTGCTTAAAGCCGATAATATCGAAAAAATCACTCTGCGTTTTGCAATGTAAATCACCGCAAAATCGGCACAATGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagc < 1:5782‑M2/251‑94 (MQ=255) gcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccACAATGCCGCCCATGATTTTTGTTCCGTTTgccag < 1:114466‑M2/35‑1 (MQ=255) ncaAACGGCGCAAACGAACGACATATTCACGCACCGTACCTGGGCTCATTTCAGTTTGCTCAAAAAGAAATTGCTTAAAGCCGATAATATCGAAAAAATCACTCTGCGTTTTGCAATGTAAATCACCGCAAAATCGGCACAATGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttc < 1:68225‑M2/208‑64 (MQ=255) taacctgaatctgaggcaacacctggcacggctgggacggaagtcgctgtcgttatcaaaatcggtggcgctgcatgaaaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccACAATGCCGCCCATGATTTTTGTTCCGTTTGCCAGCCATTTTCATCAAGCAGCGTGTCCAGGCGGGAAATCTCGATTTTATTCACTATTTTGCCGTCGCGCACTAAGGTAATGCg > 1:256189‑M2/137‑251 (MQ=255) cGGCGCAAACGAACGACATATTCACGCACCGTACCTGGGCTAATTTCAGTTTGCTCAAAACGAAATTGCTTAAAGCCGATCATATCGAAAAACTCACTCTGCGTTTTGCAATGTAAATCACCGACAAATCGGCCCAATGCCggtgatgttgccaacttactgatttagtatatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgc < 1:273255‑M2/251‑111 (MQ=255) cgcAAACGAACGACATATTCACGCACCGTACCTGGGCTCATTTCAGTTTGCTCAAAAAGACATTGCTTAAAGACGATAATATCGAAAAAATCACTCTGCGTTTTGCAATGTAAATCACCGAAAAATCGGCACAATGCCggtgatgctgccaacttactgatttagtgtatgatggtgttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgta < 1:40638‑M2/250‑113 (MQ=255) cctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccACAATGCCGCCCATGATTTTTGTTCCGTTTGCCAGCCATTTTCATCAAGCAGCGTGTCCAGGCGGGAAATCTCGATTTTATTCACTATTTTGCCGTCGCGAACTAAGGTAATTCGATCGCGTAATTTACGGCAATg > 1:188524‑M2/116‑251 (MQ=255) aGTTTGCTCAAAAAGAAATGGCTTAAAGCCGATAAGATCGAAAAAATCACTCTGCGTTTTGCAATGTAAATCACCGCAAAATCGGCACAATGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccg > 1:254003‑M2/1‑94 (MQ=255) gttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccACAATGCCGCCCATGATTTTTGTTCCGTTTGCCAGCCATTTTCATCAancagnnnnnccnnnnnnnnnn > 2:169288‑M2/86‑144 (MQ=255) ctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccACAATGCCGCCCATGATTTTTGTTCCTTTTGCCAGCCATTTTCATCAAGCAGCGTGTCCAGGCGTGAAATCTCGATTTTATTCACTAGATTTCCGTcgc < 1:234077‑M2/99‑1 (MQ=255) gcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccACAATGCCGCCCATGATTTTTGTTCCGTTTGCCAGCCATTTTCATCAAGCAGCGTGTCCAGGCGGGAAATCTCGATTTTATTCACTATTTTGCCGTCGCGAACTAAGGTAATGCGATCGAGTAATTTACGGCAATGCGCGCAATGGGTCTGGCTGTGTTTAAAGTCTTTAAGATAGCGGCTTAATgg < 1:257343‑M2/187‑1 (MQ=255) tgacaacgtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccACAATGACGCCCATGATTTTTGTTCCGTTTGCCAGCCATTTTCATCAAGCAGCGTGTCCAGGCGGGAAATCTCGATTTTTTTCACTATTTTGCCGTCGCGCACTAAGGCAATGCGATCGAGTAATTTACGGCAATGCGCGCAATGGGTCTGGCTGTGTTTAAAGTCTTTAAGATAGCGGCTTAATGGcc > 1:160600‑M2/62‑250 (MQ=255) gcattatctgaacataaaacactatcaataagttggagtcattaccACAATGCCGCCCATGATTTTTGTTCCGTTTGACAGCCATTTTCATCAAGCAGCGTGTCCAGGCGGGAAAtctc > 1:108684‑M2/47‑119 (MQ=255) cataaaacactatcaataagttggagtcattaccACAATGCCGCCCATGATTTTTGTTCCGTTTGCCAGCCATTTTCATCAAGCAGCGTGTCCAGGCGGGAAATCTCGATTTTATTCACTAtttt > 1:16529‑M2/35‑125 (MQ=255) ntcACCGCAAAATCGGCACAATGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggaactcccgaggcttctgtttctatcagctgtcactcatgttccgctactgacggggtggtgcgtaacgccaacaacacc < 1:54121‑M2/151‑128 (MQ=255) aTCGGCACAATGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcac > 1:203661‑M2/1‑14 (MQ=255) tgcACAATGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggctctccagaggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggagcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaaaatggcaactgcagttcacttacaccgcttctcaccccggtacgcaccagaaactcattgatatggccatga < 1:195786‑M2/249‑240 (MQ=255) ccACAATGCCGCCCATGATTTTTGTTCCGTTTGCCAGCCATTTTCATCAAGCAGCGTGTCCAGGCGGGAAATCTCGATTTTATTAACTATTTTGCCGTCGCGAACTAAGGTAATGCGATAGAGTAATTTACGGCAATGCGCGCACTGGGTCTGGCTGTGTTTAAAGTCTTTAAGATAGCGGCTTAATGGCCGTCTtttccgg > 1:198135‑M2/3‑199 (MQ=255) cacaATGCCggtgatgctgccaacttacggatttagtgtattatggtgtttttgaggtgctccagtggcttctgtttctatc > 1:276953‑M2/1‑9 (MQ=255) | TAATTGTTGGTGCTGGTGGTGGGCAGCCACGGGGCGAGGATTTCATCAAGGAAACCGTCCTGCAGCTGATCGAGGGAAATATTTTGCTCGTGTAGATGATTCCCCAAACGGCGCAAACGAACGACATATTCACGCACCGTACCTGGGCTCATTTCAGTTTGCTCAAAAAGAAATTGCTTAAAGCCGATAATATCGAAAAAATCACTCTGCGTTTTGCAATGTAAATCACCGCAAAATCGGCACAATGCCGCCCATGATTTTTGTTCCGTTTGCCAGCCATTTTCATCAAGCAGCGTGTCCAGGCGGGAAATCTCGATTTTATTCACTATTTTGCCGTCGCGAACTAAGGTAATGCGATCGAGTAATTTACGGCAATGCGCGCAATGGGTCTGGCTGTGTTTAAAGTCTTTAAGATAGCGGCTTAATGGCCGTCTTTTCAGGTGCTGCACCATCATTAAGAACTCCTGGTAGTCAAAGTTAAAGTGCGG > NC_000913/2000570‑2001057 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |