Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,494,489 IS5 (–) +4 bp coding (580‑583/924 nt) ydcI ← DNA‑binding transcriptional dual regulator YdcI

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1494489 =1 (0.090)10 (0.860) 9/302 0.2 90.7% coding (583/924 nt) ydcI DNA‑binding transcriptional dual regulator YdcI
?NC_000913 = 2290113 NA (NA)noncoding (1/1195 nt) IS5 repeat region
* ? NC_000913 = 14944921 (0.090)20 (1.710) 17/304 0.0 95.1% coding (580/924 nt) ydcI DNA‑binding transcriptional dual regulator YdcI
?NC_000913 2101749 = NA (NA)noncoding (1195/1195 nt) IS5 repeat region

TGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTT  >  NC_000913/2101518‑2101983
                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                          
ggTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTGCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCggg                                                                                                                                                                                                                         <  1:143348/250‑1 (MQ=255)
                                               aGTCTGACACCAGCCAGGCTAAGCCTGAAGCACAGGTCAATATCTTCACAGTGCAGAAACGAACCTTGATCGAATCCATTTACGCGCACAAAATCAGAAAAACGTACCAGCATAAAGGATCCTGCGCTCCAATCAACAGCCGTATCATAATAGATACTGCCTATAGGGTTTCATGGTTAACTAAAGAAAGTTCGAAGATGCGGGGAAATTCTTCGCGGCTTACTCAGTCATTTCATTTCTTCATGTTTGa                                                                                                                                                                           <  1:237521/250‑1 (MQ=255)
                                                          agccagGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTtc                                                                                                                                                               <  1:11260/251‑1 (MQ=255)
                                                           gccagGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAANAACNTACCNGCNTAAATGATCCTGCGCNCCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTNNGNNNTNTGaaggaa                                                                                                                                                                                                                                         <  2:196817/176‑1 (MQ=255)
                                                           gccagGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATATGAAAAACGTACCAGAATAAATGATCCTGCGCACCAATCAACACCCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTaaggaa                                                                                                                                                                                                                                         >  1:196817/1‑176 (MQ=255)
                                                                gCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATGTACACGCACAAAATCGGAAAAACGGACCAGCATAAATGATCCTGCGCACCAATCAACAACCGGAGCAGAATAGATACTTTCTTTAGGAATGTTTGTTTTATTAAGGAAGGTGCGAATAAGCggn                                                                                                                                                                                                                         <  1:28608/187‑2 (MQ=255)
                                                                 cTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGNt                                                                                                                                                                                                                                      <  1:216525/173‑1 (MQ=255)
                                                                     gCCTCACGCACAGGTCAATATCTTCAAAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACCACATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGCCTCAGTCATTTCATTTCTTCATGTTTGCGCCGATTTTTTCTCCCGTAAATg                                                                                                                                                    >  1:209301/1‑251 (MQ=255)
                                                                     gCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTTTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTaattt                                                                                                                                                    >  1:201146/1‑248 (MQ=255)
                                                                             cacaGGTCAATATCTTCACAGTACATAAAGTAACCTTGATAGAAGCCATTTACACCAACACCATCTGAAAAACGTCCCAGCATAAATGATCCTGCGCACAAATAAACACCCGAATCAGACTAGATACTTTCTTTAGGCATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAACTTCTTCTCGGCTGCCTCAGTCATTTCGTTTATTCCTGTTTGAGCCGATTTTTTCTCCCGTACATGCCTTGAAt                                                                                                                                            >  1:177958/1‑251 (MQ=25)
                                                                                  gTCAATATCTGCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATGCTTCTCGTCTGACTCATGCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGcc                                                                                                                                       <  1:193411/251‑1 (MQ=255)
                                                                                                         aGTAACCTGGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTCCCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATTCTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCATTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCAt                                                                                                                <  1:5551/251‑1 (MQ=255)
                                                                                                              ccTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCCTAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAANa                                                                                                                                                                                                                               >  2:167838/1‑135 (MQ=255)
                                                                                                              ccTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCtn                                                                                                                                                                                                        <  1:167838/158‑2 (MQ=255)
                                                                                                                       aaGCCNNTTNNNCGNNCAAAATCTGAAAAACGTACCAGCNTAAATGATCCTGCGCACCAATCAACAACCNTNTNAGAANNGATNCTTTCTTTAGNAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTNGNCTGACTCAGTCATTTCATTTCTTCATGTTTg                                                                                                                                                                            >  2:208207/1‑177 (MQ=255)
                                                                                                                       aaGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTg                                                                                                                                                                            <  1:208207/177‑1 (MQ=255)
                                                                                                                          ncATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGCATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATcccc                                                                                                >  1:79143/2‑250 (MQ=255)
                                                                                                                                       caAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTtctcn                                                                                                                                                            <  1:55927/177‑2 (MQ=255)
                                                                                                                                               gAAAAACGTACCATCATAAATGAGCCTGCGCACCAATCATCAACCGTATCAGAATAGATTCTTTCTTTAGGAATTTTTGTGTTATTAAGGAATGTGCGAATAAGCTGGGAAATTCTGCTCGTCTTCCTCAGTCATGTCATTTCTTCATGTTTGAGCCGATGTTTTCTCCCGTAAATGCCGTGAATCAGCTTAGTTAGATCGTTTCTTCGGCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGAtctctc                                                                            <  1:186654/249‑1 (MQ=18)
                                                                                                                                               gAAAAACGTAACAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATcccc                                                                                                <  1:75089/229‑1 (MQ=255)
                                                                                                                                                aaaaaCGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCa                                                                         <  1:133632/251‑1 (MQ=255)
                                                                                                                                                                      nnnnnnncnccnnccaanaaCCGGAGCAGAATAGATACTTTCNTTAGGAATTTTTGTTTTATTAAGGAAGGTGCNANTAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAGNTTGGAGCCGANTTTNNCTCCNGNANATGCCTTGAAGCAGCCTATTTAGACCGTTNCTTCGCCATTTAAGGCGTTATCCNNAGNNNTTNNTgaga                                                                                  <  2:209301/206‑1 (MQ=17)
                                                                                                                                                                             cACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGaa                                                                                                                                                                                                                                 >  1:106968/1‑70 (MQ=255)
                                                                                                                                                                             cACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCCGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAAc                                             >  1:42320/1‑250 (MQ=255)
                                                                                                                                                                               ncAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGAACTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAgg                                          >  1:29013/2‑251 (MQ=255)
                                                                                                                                                                                                                   aGGAATTGTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCGCTCCCACTTGCGTATCATTTGTTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCg      <  1:181832/251‑1 (MQ=255)
                                                                                                                                                                                                                       aTTTTTGTTTTAGTAAGGAAGGTGCGAATAAGCGGGGAAATTCCTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGTCCTTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTGTTAGTGAGAGCTCTGCCACTGACGTGTCATTTGGTCCGCCCGAAACATGGTGGCCAGCGTGAATAACATCGCCATTTGGTTATCGtttt  <  1:203309/251‑1 (MQ=11)
                                                                                                                                                                                                                             gTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTcn                                                      <  1:67205/193‑2 (MQ=18)
                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                          
TGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTT  >  NC_000913/2101518‑2101983

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.