| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,964,254 | A→C | V266G (GTC→GGC) | flhA ← | flagellar biosynthesis protein FlhA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,964,254 | 0 | A | C | 100.0% | 32.5 / NA | 14 | V266G (GTC→GGC) | flhA | flagellar biosynthesis protein FlhA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (5/9); total (5/9) | |||||||||||
CCGGTTTGGGTTCGGCAGGCGCTTTTTGTTCGCGTCCGCGTATCCACCAGGCCAGCCCGAGCAATCCGGCAGTGAACAGCAAAAATACCAGGTTCGGCATTCCAGGCACCAGGCCGAGTAAACCGAGCACGGCGGCGCTTAACAACATAACGCTTGGGTTACTGAAAAGCTGATTCACCATCTGCTCGCCAACATCCTGATCGGTGCTGACACGCGTAACGATGACCCCCGCGGCGGTAGAAATCACCAGCGCCGGAATTTGTGCCACCAGACCGTCGCCAATGGTCAATAGCGTATAACTTTCCGCCGCGTGTCCCATGCTCATGCCATGTTGCAGCACGCCGACCAGCAACCCGCCGACAATGTTAATGACCATGATGAGGATCCCGGCGATGGCATCGCCGCGAACAAACTTACTTGCCCCGTCCATTGAGCCGTAAAAATCGGCTTCCTGAGTCACTTCGGAGC > NC_000913/1964030‑1964497 | ccGGTTTGGGTTCGGCATGCGCTTTTTGTGCGCGTCCGCGGATCCACCGGGCCAGCCCGAGCAATCCGGCAGGGAACAGCAAAAATACCAGGTTCGGCATTCCAGGCACCAGGCCGATTAAACCGAGCACGGCGGCTCTTAACAACATAACGCTTGGGTTTCTGAAAAGCTGATTCGTCATCTGCTCGCCAACATCCTGAGCGGTGCTGACACGCGTAACGATGCCCCCCGCGGCGGTAGAAATCACCAgc < 1:395081/251‑1 (MQ=255) gttGGGTTCGGCAGGCGCTTTTTGTTCGCGTCCGCGTATCCACCAGGCCAGCCCGAGCAATCCGGCAGTGAACAGCAAAAATACCAGGTTCGGCATTCCAGGCACCAGGCCGAGTAAACCGAGCACGGCGGCGCTTAACAACATAACGCTTGGGTTACTGAAAAGCTGATTCACCATCTGCTCGCCAACATCCTGATCGGTGCTGACACGCGTAACGATGCCCCCCGCGGCGGTAGAAATCACCAGCGccn < 1:117143/250‑2 (MQ=255) gTTCGGCAGGCGCTTTTTGTTAGAGTACGCGTATCCACCAGGCCAGCCCGAGCAATCCGGCACAGAACAGCCAAAATATCAGGTTTCGCATTCCAGGCACCAGGCCGAGTAAACCGAGCACGGCGGCGCTTAACAACATAACGCTTGGGTTACTGAAAAGCTGATTCACCATCTGCTCGCCAACATCCTGATCGGAGCTGACACGCGTAACGATGCCCCCCGCGGCGGGAGAAAACACCAGCACCGGAAtt > 1:120347/1‑251 (MQ=255) gCCAGCCCGAGCAATCCGGCAGTGAACAGCAAAAATACCAGGTTCGGCATTCCAGGCACCAGGCCGAGTAAACCGAGCACGGCGGCGCTTAACAACATAACGCTTGGGTTACTGAAAAGCTGATTCACCATCTGCTCGCCAACATCCTGATCGGTGCTGACACGCGTAACGATGCCCCCCGCGGCGGTAGAAATCACCAGCGCCGGAATTTGTGCCACCAGACCGTCGCCAATGGTCAATAGCGTATAACt > 1:420497/1‑251 (MQ=255) cAATCCGGCAGTGAACAGCAAAAATACCAGGTTCGGCATTCCAGGCACCAGGCCGAGACAACCGGGCACGGCGGCGATTAACAACATACCGCTTGGGTTACTGAAAAGCTGATTCACCATCTGCTCGCCACCATCCTGATCGGTGCTGACACGCGTAACGATGCCCCCCGCGGCGGTAGAAATCACCAGCGCCGGAATTTGTCCCACCAGACCGTCGCCAATGGTCAATAGCGTATAACTTTCCGCCGCgt > 1:231883/1‑251 (MQ=255) cAGTGAACAGCAAAAATACCAGGTTCGGCATTCCAGGCACCAGGCCGAGTAAACCGAGCACGGCGGCGCTTAACAACATGACGCTTGGGTTACTGAAAAGCGGAGTCACCAGCTGCTCGCCAACATCCTGATCGGTGCTGACACGCGTAACGCGGCCCCCCGCGGCGGTAGAAATCACCAg < 1:133811/181‑1 (MQ=255) tCGGCATTCCAGGCACCAGGCCGAGTAAACCGAGCACGGCGGCGCTTAACAACATAACGCTTGGGTTACTGAAAAGCTGATTCACCATCTGCTCGCCAACATCCTGATCGGTGCTGACACGCGTAACGATGCCCCCCGCGGCGGGAGAAATCACCAGCGCCGGAATTTGTGCCACCAGACCGTCGCCAATGGTCAATAGCGGATAACTTTCCGCCGCGTGTCCCATGCTCATGCCATGTTGCAGCACGcc < 1:238933/250‑1 (MQ=255) naGCACGGCGGCGCTTAACAACATAACGCTTGGGTTACTGCAAAGCTGATTCACCATCTGCTCGCCAACATCCTGATCGGTGCTGACACGCGTAACGATGCCCCCCGCGGCGGTAGAAATCACCAGCGCCGGAATTTGTGCCACCAGACCGGCGCCAATGGTCAATAGCGTATAACTTTCCGCCGCGTGTCCCATGCTCATGCCATGTTGCAGCACGCCGACCAGCAACccgcc > 1:359937/2‑234 (MQ=255) ggTTACTGAAAAGCTGATTCACCATCTGCTCGCCAACATCCTGATCGGTGCTGACACGCGTAACGATGCCCCCCGCGGCGGTAGAAATCACCAGCGCCGGAATGTGTGCCACCAGACCGTCGCCAATGGTCAATAGCGTATAACTTTCCGCcgcg < 1:286220/155‑1 (MQ=255) cgtgtgctcgtccgatCGCCAACATCCTGATCGGTGCTGACACGCGTAACGATGCCCCCCGCGGCGGTAGAAATCACCAGCGCCGGAATTTGTGCCACCAGACCGTCGCCAATGGTCAAGAGCGTATAACGGTCCTCCGCGTGTCCCATGCTCATGCCAGGTTGCAGCACGCCGACCAGCAACCCGCCGACAAGGTTAATGACCATGATGAGGATCCCGGCGATGGCATCGCCGCGAACAAACTTACTTGc < 1:297682/236‑1 (MQ=255) gCTCGCCAACACCCTGATCGGTGCGGACACCCTTAACGATGCCCCCCGCGGCGGTAGAAATCACCAGCGCCGGAATTTGTGCCACCAGACCGTCGCCAATGGTCAATAGCTTATAGCTTTCCGCCGCGTCTCCCATGCTCATGCCATGTTGCAGCACGCCGACCACCAACCCGCCGACAATGTTAAGGTCCATGATGAGGATCCCGTCGATGTCATCGCCGCGAACAAACTTACTTGCCCCGTCCATTg < 1:404902/249‑1 (MQ=255) cGCCANCCTCCNGNNCGGTGCTGACACGCGTAACNATGCCCCCCGCGGCGNTAGANATCACNAgng > 2:168472/1‑66 (MQ=255) gATCGGTGCTGACACGCGTAACGATGCCCCCCGCGGCGGTAGAAATCACCAGCGCCGGAATTTGTGCCACCAGACCGTCGCCAATGGTCAATAGCGTATAACTTTCCGCCGCGTGTCCCATGCTCATGCCATGTTGCAGCACGCCGACCAGCAACCCGCCGACAATGTTAATGACCATGATGAGGATCCCGGCGTTGGCATCGCCGCGAACAAACTTACTTGCCCCGTCCATTGAGCCGTAAAAATCGGCt < 1:253350/251‑1 (MQ=255) aaCGATGCCCCCCGCGGCGGTAGAAATCACCAGCGCCGGAATTTGTGCCACCAGACCGTCGCCAATGGTCAATAGCGTATAACTTTCCGCCGCGTGTCCCATGCTCATGCCATGTTGCAGCACGCCGACCAGCAACCCGCCGACAATGTTAATGACCATGATGAGGATCCCGGCGATGGCATCGCCGCGAACAAACTTACTTGCCCCGTCCATTGAGCCGTAAAAATCGGCTTCCTGAGTCACTTCGGAgc < 1:168472/251‑1 (MQ=255) | CCGGTTTGGGTTCGGCAGGCGCTTTTTGTTCGCGTCCGCGTATCCACCAGGCCAGCCCGAGCAATCCGGCAGTGAACAGCAAAAATACCAGGTTCGGCATTCCAGGCACCAGGCCGAGTAAACCGAGCACGGCGGCGCTTAACAACATAACGCTTGGGTTACTGAAAAGCTGATTCACCATCTGCTCGCCAACATCCTGATCGGTGCTGACACGCGTAACGATGACCCCCGCGGCGGTAGAAATCACCAGCGCCGGAATTTGTGCCACCAGACCGTCGCCAATGGTCAATAGCGTATAACTTTCCGCCGCGTGTCCCATGCTCATGCCATGTTGCAGCACGCCGACCAGCAACCCGCCGACAATGTTAATGACCATGATGAGGATCCCGGCGATGGCATCGCCGCGAACAAACTTACTTGCCCCGTCCATTGAGCCGTAAAAATCGGCTTCCTGAGTCACTTCGGAGC > NC_000913/1964030‑1964497 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |