Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 519,280 C→T L162L (CTG→CTA tesA ← multifunctional acyl‑CoA thioesterase I and protease I and lysophospholipase L1

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913519,2800CT100.0% 45.4 / NA 20L162L (CTG→CTAtesAmultifunctional acyl‑CoA thioesterase I and protease I and lysophospholipase L1
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (8/12);  total (8/12)

CAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATGAGTCATGATTTACTAAAGGCTGCAACTGCTTCGCCATCCAGTCGGCAATAAACGGCTGGGCGTCGCGGTTGGGATGAATACCGTCATCCTGCATCCATTGTGGCTTGAGGTAGACCTCTTCCATAAAAAAGGGCAGCAGCGGAACATCAAACTCTTTGGCGAGTTTGGGGTAAATGGCGCTAAAGGCTTCATTATAACGGCGACCATAGTTTGCAGGCAGACGTATTTGCATTAACAATGGTTCAGCGTTGGCGGCTTTGACATCCTGCAAAATCTGGCGCAGCGTTTGCTCGGTTTGCTGTGGCTGAAAACCACGCAAACCGTCATTGCCGCCCAGTTCAACCAGCACCCAACGCGGCTGATGCTGTTTCAGC  >  NC_000913/519063‑519517
                                                                                                                                                                                                                         |                                                                                                                                                                                                                                             
cAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATGAGTCATGATTTACTAAAGGCTGCAACTGCTTCGCCATCCAGTCGGCAATAAACGGCTGGGCGTCGCGGTTGGGATGAATACCGTCATCCTGCATCCATTGTGGCTTGAGGTAGACCTCTTCCATAAAAAAGGGCAGTAGCGGAACATCAAACTCTTTGGCGAGTTTgggg                                                                                                                                                                                                              >  1:209916/1‑251 (MQ=255)
          ccACTGGAACATCCGGTAATTAAGCCCGATTTTTACATAACTTTACCTGTAAGGATCTCCGTTGCTTTATGAGTCCTGATTTACTAAAGGCTGCAACTGCTTCGCCATCCAGTCGGCACTAAACGGCTGGGCGTCGCGGTTGGGATGCATACCGTCATCCTGCATCCATTGTGGCTTGAGGTAGACCTCTTCCATAAAAAAGGGCAGTAGCGGAACATCAAACTCTTTGGCGAGTTTGGGGTAAATGgcgc                                                                                                                                                                                                    >  1:161672/1‑251 (MQ=255)
                                                    ttACCTGTCAGGATCTCCGTTGCTTTATGAGTCATGATTTACTAAAGGCTGCAACTGCGTCGCCATCCAGTCGGCAATAAACGGCTGGGCGTCGCGGTTGGGATGAATACCGTCAACCTGGATCCATGGTGGCTTGAGGTAGACCTCTTCCATAAAAAAGGGCAGTAGCGGAACATCAAGCTCGTTGGCGAGTTTGGGGAAAATGGCGCTAAAGGCTTCATTATAACGGCGACCATAGTTTGCAGGCAGa                                                                                                                                                           <  1:171127/250‑1 (MQ=255)
                                                                            ttATGAGTCATGATTTACTAAAGGCTGCAACTGCTTCGCCATCCAGTCGGCAATAAACGGCTGGGCGTCGCGGTTGGGATGAATACCGTCATCCTGCATCCATTGTGGCTTGAGGTAGACCTCTTCCATAAAAAAGGGCAGTAGCGGAACATCAAACTCTTTGGCGAGTTTGGGGTAAATGGCGCTAAAGGCTTCATTATAACGGCGACCATAGTTTGCAGGCAGACGTATTTGCATTAACAATGGTTc                                                                                                                                    <  1:247765/249‑1 (MQ=255)
                                                                                 aGTCATGATTTACTAAAGGCTGCAACTGCTTCGCCATCCAGTCGGCAATAAACGGCTGGGCGTCGCGGTTGGGATGAATACCGTCATCCTGCATCCATTGTGGCTTGAGGTAGACCTCTTCCATAAAAAAGGGCAGTAGCGGAACATCAAACTCTTTGGCGAGTTTGGGGTAAATGGCGCTAAAGGCTTCATTATAACGGCGACCATAGTTTGCAGGCAGACGTATTTGCATTAACAATGGTTCAGCGt                                                                                                                               <  1:243032/249‑1 (MQ=255)
                                                                                                   gCTGCAACTGCTTCGCCATCCAGTCGGCAATAAACGGCTGGGCGTCGCGGTTGGGATGAATACCGTCATCCTGCATCCATTGTGGCTTGAGGTAGACCTCTTCCATAAAAAAGGGCAGTAGCGGAACATCAAACTCTTTGGCGAGTTTGGGGTAAATGGCGCTAAAGGCTTCATTATAACGGCGACCATAGTTTGCAGGCAGACGTATTTGCATTAACAATGGTTCAGCGTTGGCGGCTTTGACATCCTGc                                                                                                           >  1:18600/1‑251 (MQ=255)
                                                                                                            gCTTCGCCATCCAGTCGGCAATAAACGGCTGGGCGTCGCGGTTGGGATGAATACCGTCATCCTGCATCCATTGTGGCTTGAGGTAGACCTCTTCCATAAAAAAGGGCAGTAGCGGAACATCAAACTCTTTGGCGAGTTTGGGGTAAATGGCGCTAAAGGCTTCATTATAACGGCGACCATAGTTTGCAGGCAGACGTATTTGCATTAACAATGGTTCAGCGTTGGCGGCTTTGACATCCTGCAAAATCTg                                                                                                   <  1:375948/250‑1 (MQ=255)
                                                                                                               tCGCCATCCAGTCGGCAATAAACGGCTGGGCGTCGCGGTTGGGATGAATACCGTCATCCGGCATCCATTGTGGCTTGAGGTAGACCTCTTCCATAAAAAAGGGCAGTAGCGGAACATCAAACTCTTTGGCGAGTTGGGGGTAAATGgc                                                                                                                                                                                                      <  1:163856/148‑1 (MQ=255)
                                                                                                                 gtcATCCAGGCGGCAATAAACGGCTGGGCGTCGCGGTTGAGATGAATACCGTCATCCTGCATCCATTGTGGCTTGAGGTAGACCTCTTCCATAAAAAAGGGCAGTAGCTGAACATCAAACTCTTTGTCGAGTTTGGGGTAAATGGCGCGAAATGCTTCATTATAACGGCGACCATAGTTCGTATGCAGTCGGATTTGCATTAACAATGTTTCAGCGTTGGCGGCTTTGACATCCTGCAAAATCtcg                                                                                                  <  1:423755/244‑3 (MQ=255)
                                                                                                                             gCAATAACCGGCTGGCCGTCGCGGTTGGGATGAATACCGTCATCCTGCATCCATTGTGGCTTGAGGTAGACCTCTTCCATAAAAAAGGGCAGTAGCGGAACATCAAACTCTTTGGCGAGTTTGGGGTAAATGGCGCTAAAGGCTTCATTATAACGGCGACCATAGTTTGCAGGCAGACGTATTTGCATTAACAATGGTTCAGCGTTGGCGGCTTTGACATCCTGCAAAATCTGGCGCAGCGTTTGCTCg                                                                                   >  1:123084/1‑249 (MQ=255)
                                                                                                                                       gCTGGGCGTCGCGGTTGGGATGAATACCGTCATCCTGCATCCATTGTGGCTTGAGGTAGACCTCTTCCATAAAAAAGGGCAGTAGCGGAACATCAAACTCTTTGGCGAGTTTGGGGTAAATGGCGCTAAAGGCTTCATTATAACGGCGACCATAGTTTGCAGGCAGACGTATTTGCATTAACAATGGTTCAGCGTTGGCGGCTTTGACATCCTGCAAAATCTGGCGCAGCGTTTGCTCGGTTTGCTGTGGc                                                                       <  1:142414/251‑1 (MQ=255)
                                                                                                                                                 gcgGTTGGGATGAATACCGTCTTCCTGCATCCATTGTGGCTTGAGGTAGACCTCTTCCATAAAAAAGGGCAGTAGCGGAACATCAAACTCTTTGGCGAGTTGGGGGTAAATGGCGCTAAAGGCTTCATTATAACGGCGTCCATAGTTTGCAGGCAGACGTATTTGCATTAACAATGGTTCAGCGTTGGCGGCTTTGACATCCTGCAAAATCTGGCGCAGCGTTTGCTCGGTTTGCTGTGGCTGAAAACCan                                                             <  1:40892/251‑2 (MQ=255)
                                                                                                                                                         gATGAATACCGTCATCCTGCATCCATTGTGGCTTGAGGTAGACCTCTTCCATAAAAAAGGGCAGTAGCGGAACATCAAACTCTTTGGCGAGTTTGGGGTAAATGGCGCTAAAGGCTTCATTATAACGGCGACCATAGGTTGCAGGCAGACGTAGTGGCATTAACAATGGTTCAGCGTTGGCGGCTTTGACATCCTGCAAAATCTGgcgc                                                                                               <  1:339110/209‑1 (MQ=255)
                                                                                                                                                           tGAATACCGTCATCCTGCATCCATTGTGGCTTGAGTTAGACCTCTTCCATAAAAAAGGGCAGTAGCGGAACATCAAACTCTTTGGCGAGTTTgggn                                                                                                                                                                                                              <  1:276683/96‑2 (MQ=255)
                                                                                                                                                           tGAATACCGTCATCCTGCATACATTGTGGCTTGAGGGAAACCTCTTCCAGAAAAAAGGGCAGTAGCGGAACATCAAACTCTTTGGCGAGTTTgggg                                                                                                                                                                                                              >  2:276683/1‑96 (MQ=255)
                                                                                                                                                                   gTCATCCTGCATCCATTGTGGCTTGAGGTAGACCTCTTCCATAAAAAAGAGCAGTAGCGGAACATAAAACTCTTTGGCGCGTTTGGGGTAAATGGAGATAAAGGCTTCATTCTAACGGCGACCATAGTTTGCAGGCAGACGTATTTGCATTAACAATGGTTCAGCGTTGGCGGCTTTGACATCCTGCAAAATCTGGCGCAGCGTTTGCTCGGTATGCTGTGGCTGAAAACCACGCAAACCGTc                                                   >  1:292258/1‑243 (MQ=255)
                                                                                                                                                                                      ggCTTGAGGTAGACCTCTTCCATAAAAAAGGGCAGTAGCGGAACATAAAACTCTTTGGCGAGTTTGGGGTAAATGGCGCTAAAGGCTTCATTATAACGGCGACCATAGTTTGCAGGCAGACGTATTTGCAATAACAATGGTTAAGCGTTGGCGGCTTTGACATCCTGAAAACTATGGCGCAGCGTTTGATCGGTTTGCTGTGGATGAAAACCAAGCAAATCGTCATTGACGACCAGTTCACCCAGCAccc                         >  1:38226/1‑250 (MQ=255)
                                                                                                                                                                                           gAGGTAGACCTCTTCCATAAAAAAGGGCAGTAGCGGAACATCAAACTCTTTGGCGAGTTTGGGGTAAATGGCGCTAAAGGCTTCATTATAACGGCGACCATAGTTTGCAGGCAGACGTATTTGCATTAACAATGGTTCAGCGTTGGCGGCTTTGACATCCTGCAAAATCTGGCGCAGCGTTTGCTCGGTTTGCTGTGGCTGAAAACCACGCAAACCGTCATTGCCGCCCAGTTCAACCAGCACCCAAcgc                    <  1:344577/250‑1 (MQ=255)
                                                                                                                                                                                                   ccTCTTCCATAAAAAAGGGCAGTAGCTGAACATCAAACTCTTTTGCGAGTTGGGGGTAAATTGCTCTATAGGCTTCATTAGAACGGCGACCATAGTTTGCAGGCAGACGTATTTGCan                                                                                                                                                <  1:81535/118‑2 (MQ=255)
                                                                                                                                                                                                              naaaaGGGCAGTAGCGGAACATCAAACTCTTTGGCGAGTTTGGGGTAAATGGCGCTAAAGGCTTCATTATAACGGCGACCATAGTTTGCAGGCAGACGTATTTGCATTAACAATGGTTCAGCGTTGGCGGCTTTGACATCCTGCAAAATCTGGCGCAGCGTTTGCTCGGTTTGCTGTGGCTGAAAACCACGCACACCGTCATTGCCGCCCAGTTCAACCAGCACCCAACGCGGCTGATGCTGTTTcagc  >  1:51816/2‑249 (MQ=255)
                                                                                                                                                                                                                     gcagtaGCGGAACATCAAACTCTTTGGCGAGTTTGGGGTAAATGGCGCTAAAGGCTTCATTATAACGGCGACCATAGTTTGCAGGCAGACGTATTTGCATTAACAATGGTTCAGCGTTGGCGGCTTTGACATCCTGCAAAATCTGGCGCAGCGTTTGCTCGGTTTGCTGTGGCTGAAAACCACGCAAACCGTCATTGCCGCCCAGTTCAACCAGCAccc                         >  1:3484/1‑219 (MQ=255)
                                                                                                                                                                                                                         |                                                                                                                                                                                                                                             
CAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATGAGTCATGATTTACTAAAGGCTGCAACTGCTTCGCCATCCAGTCGGCAATAAACGGCTGGGCGTCGCGGTTGGGATGAATACCGTCATCCTGCATCCATTGTGGCTTGAGGTAGACCTCTTCCATAAAAAAGGGCAGCAGCGGAACATCAAACTCTTTGGCGAGTTTGGGGTAAATGGCGCTAAAGGCTTCATTATAACGGCGACCATAGTTTGCAGGCAGACGTATTTGCATTAACAATGGTTCAGCGTTGGCGGCTTTGACATCCTGCAAAATCTGGCGCAGCGTTTGCTCGGTTTGCTGTGGCTGAAAACCACGCAAACCGTCATTGCCGCCCAGTTCAACCAGCACCCAACGCGGCTGATGCTGTTTCAGC  >  NC_000913/519063‑519517

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: