| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 75,070 | C→T | P137P (CCG→CCA) | thiB ← | thiamine ABC transporter periplasmic binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 75,070 | 0 | C | T | 100.0% | 41.8 / NA | 17 | P137P (CCG→CCA) | thiB | thiamine ABC transporter periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (10/7); total (10/7) | |||||||||||
GGAGAGGTGGTGTAACTCAGTACCAGATCGCTTTCACCTTTTAAAAACAGGCCGTAGGCTTCGCTCCAGCCTTTGGTGACCGTGACCGTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTGGCGGCGTCTAACAGGTTGTTATCCAGCCCCAGCACCACATCGGCTTTACTGTTTTTGCCTTCCATCCGTAGACGGTTGAGAAGC > NC_000913/74825‑75295 | ggAGAGGTGGTGTAACTCAGTACCAGATCGCTTTCACCTTTTAAAAACAGGCCGTAGGCTTCGCTCCAGCCTTTGGTGACCGTGACCGTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGTGGGtt > 1:175848/1‑251 (MQ=255) ggtggtGTAACTCAGTACCAGATCGCTTTCACCTTTTAAAAACAGGCCGTAGGCTTCGCTCCAGCCTTTGGTGACCGTGACCGTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGTGGGTTTTTc > 1:100786/1‑250 (MQ=255) aaCTCAGTACCAGATCGCTTTCACCTTTTAAAAACAGGACGTAGGCTTCGCTCCCGCCTTTGCTGACAGTGACCGTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGAGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACACAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGTGGGTTTTTCAGTTTGttt > 1:398004/1‑250 (MQ=255) tttAAAAACAGGCCGTAGGCTTCCCTCCAGCCTTTGGTGACCGTGACCGTTTTTTTCGCCAGTTTCTGCCAGGCTTGTGGGGCTTCATGGCCATAGACTTTTTGCATCCATAGCAACAGGCCCAGCCCCGGTGTACGGGTGCGCGGATCCTGATAAATCCCCCGCCAGTTTTGATCGCTCGCAACCAGTTCTTTCAGGCTTTGTGGTGTGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAg < 1:96701/249‑1 (MQ=255) ntAGGCTTCGCTCCAGCCTTTGGTGACCGTGACCGTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGGGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGTGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCAAACGGt > 1:270938/2‑250 (MQ=255) ncgnccgngnngnngggnCGCCATCCCCATAGACTTTTGNNACCCATAGCNACAGCCCCGCCCCCGGTGTACGGGGGCGCGGATCCTGATAAATCCCCCGCCAGNTTTGATCGCNNTCNACCAGNTNNNTNNNGCNTTGTGGTGGGTTTTTCAGTNTGNNCTTGTCNTAAACGAAGGCGAAGTAGCCATAATc < 2:100786/179‑1 (MQ=255) cAGGCTTGTGGGGCGTCGTCGCCATAGACTTTTTGCATCTCTAGCAACCGACACACCCCCGGTGTACTGGTGCGCGGATCATGATAAATCACCCGCCAGTTTTGATCGCTCTCAACAAGATCTTTCAGGCTTTGTGGTGGGTTTTTCAGTTTGTTCTTGTCATAATCGAAGGGGAAGTAGCCATCATCAAACGGTACGAAAGAGTCATTATCCCAGACGCCGGGAACGTTACCGGCATCCGCTGACACAcc > 1:301147/1‑251 (MQ=255) ggggCGTCATCGCCATAGATTTTTTGCATCCATACCAACAGTCCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAACCCCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGTGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCAAACGGTACGAAATTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTggn < 1:92690/251‑2 (MQ=255) tCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCACCGGTGTACTGGTGCGCGGATCCTGCTAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGAGGTGGGTTTTTCAGTTTGTTCt > 1:145183/1‑139 (MQ=255) gCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGTGGGTTTTTCa < 1:249997/128‑1 (MQ=255) ncAGACCCAGCCCCGGTGTACTGGTGCGCGGATCCTGACAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGTGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAgg > 1:92005/2‑126 (MQ=255) gACCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATACATCACCCGCCAGTTTTGATCGCTCTCAAACAGTTCTTTCAGGCTTTGTGGTGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCa > 1:396436/1‑140 (MQ=255) ggTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGTGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTc > 1:217277/1‑200 (MQ=255) gacccggATAAATCCCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGTGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCTGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCgg < 1:410494/189‑1 (MQ=255) aTCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGTGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTGGCGGCGTCTAACAGGTTGTTATCCAGCCCCAGCACCACATCGGCTTTACTGTTTTTGc > 1:414940/1‑250 (MQ=255) nnccnNNNNGTTNTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGTGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACgg < 2:270938/144‑1 (MQ=255) cAACCAGTTCTTTCAGGCTTTGTGGTGGGTTTTTCAGTTTGTTCTTGTCATAATCGAAGGCGAAGTAGCCATAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACGGGCGGCGTCTAACAGGTTGTTAGCCAGCCCCAGCTCCACATCGGCTTTACTGTTTTTGCCTTCCATCCGTAGACGGTTGAGAAGc < 1:430208/251‑1 (MQ=255) | GGAGAGGTGGTGTAACTCAGTACCAGATCGCTTTCACCTTTTAAAAACAGGCCGTAGGCTTCGCTCCAGCCTTTGGTGACCGTGACCGTTTTCTTCGCCAGTTTCTGCCAGGCTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATCAAACGGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTGGCGGCGTCTAACAGGTTGTTATCCAGCCCCAGCACCACATCGGCTTTACTGTTTTTGCCTTCCATCCGTAGACGGTTGAGAAGC > NC_000913/74825‑75295 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |