| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 435,272 | C→T | L46L (CTG→TTG) | nusB → | transcription antitermination protein NusB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 435,272 | 0 | C | T | 100.0% | 42.6 / NA | 17 | L46L (CTG→TTG) | nusB | transcription antitermination protein NusB |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (8/9); total (8/9) | |||||||||||
GCAACAAAGGTGCAGAAGCTGCACTGACCGCGCTTGAAATGATTAATGTATTGAAAGCCATCAAGGCCTGAAATTAGTAAGGGGAAATCCGTGAAACCTGCTGCTCGTCGCCGCGCTCGTGAGTGTGCCGTCCAGGCGCTCTACTCCTGGCAGTTGTCCCAGAACGACATCGCTGATGTTGAATACCAGTTCCTGGCTGAACAGGATGTAAAAGACGTTGACGTCCTGTACTTCCGTGAGCTGCTGGCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATCGAACTGGCGAAATC > NC_000913/435047‑435474 | gCAACAAAGGTGCAGAAGCTGCACTGACCGCGCTTGAAATGATTAATGTATTGAAAGCCATCAAGGCCTGAAATTAGTAAGGGGAAATCCGTGAAACCTGCTGCTCGTCGCCGCGCTCGTGAGTGTGCCGTCCAGGCGCTCTACTCCTGGCAGTTGTCCCAGAACGACATCGCTGATGTTGAATACCAGTTCCTGGCTGAACAGGATGTAAAAGACGTTGACGTCTTGTACTTCCGTGAGCTGCTGGCCgg > 1:125113/1‑251 (MQ=255) tGCACTGACCGCGCTTGAAATGATTAATGTATTGAAAGCCATCAAGGCCTGAAATTAGTAAGGGGAAATCCGTGAAACCTGCTGCTCGTCGCCGCGCTCGTGAGTGTGCCGTCCAGGCGCTCTACTCCTGGCAGTTGTCCCAGAACGACATCGCTGATGTTGAATACCATTTCCTGGCTGAACAGGATGTAAAAGACGTTGACGTCTTGTACTTCCGTGAGCTGCTGGCCGGGGt < 1:445841/235‑1 (MQ=255) tGAAATGATTAATGTATTGAAAGCCATCAAGGCCTGAAATTAGTAAGGGGAAATCCGTGAAACCTGCTTCTCTTCGCCGCGCTCGTGAGTGTGCCGTCCAGGCGCTCTACTCCTGGCAGTTGTCCCAGAACGACATCGCTGATGTTGAATACCAGTGCCTGGCTGAACAGGATGTAAAAGACGTTGACGTCTTGTa < 1:233143/196‑1 (MQ=255) gCCATCAAGGCCTGAAATTAGTAAGGGGAAATCCGTGAAACCTCCTGCTCGTCGCCGCGCTCGTGAGTGTGCCGTCCAGGCGCTCTACTCCTGGCAGTTGTCCCAGAACGACATCGCTGATGTTGAATACCAGTTCCTGTCTGAACAGGATGTAAAAGACGTTGACGTCTTGTACTTCCGTGAGCTGCTGGCCGGGGTGGCGACTAATACCGCATCCCTCGACGGACTGATGAAGCCATACCTGTCCCGcc < 1:27005/251‑1 (MQ=255) gCCTGAAATTAGTAAGGGGAAAACCGTGAAATCTGCTGCTCGGCGCCGCGCTCGTGAGTGTGCCGTCCAGGCGCTCTACTCCTGGCAGTTGTCCCAGAACGGCATCTCTGATGTGGAATACCAGTTCCTGGCTGAACAGGATGTAAAAGACGTTGACGTCTTGTACTTCCg < 1:445337/171‑1 (MQ=255) gggAAATCCGTGAAACCTACTGCTCGTCGCCGCGCTCGTGAGTGTGCCGTCCAGGCGCTCTCCTGCTGGCAGTTGTCCCAGAACGCCATCGCTGATGTTGAATACCAGTTCCTGGCTGAACAGGATGTAAAAGACGTTGACGTCTTGTTCTTCCGTGAGCTGCTGGCCGGGGAGGCGACt > 1:443047/1‑180 (MQ=255) gaagccTGCTGCTCGTCGCCGCGCTCGTGAGTGTGCCGTCCAGGCGCTCTACTCCTGGCAGTTGTCCCAGAACGACATCGCTGATGTTGAATACCAGTTCCTGGCTGAACAGGATGTAAAAGACGTTGACGTCTTGTACTTCCGTGAGCTGCTGGCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTAc < 1:141704/247‑1 (MQ=255) ctgctgCTCGTCGCCGCGCTCGTGAGNGTGCCGNNCANGCGCTCTACTCCTGGCAGTNGTNNNANNNCNCCATCNCTNNTGTTGAATANCAGTTCCTGGCTGAACAGGATGTACA‑GACGTTGACGTCTTGTACTTCCGTGAGNTGCTGGCCGNNGTGGCGACTAATACCGCATACNTCGNNGNNCngatna > 2:97644/1‑191 (MQ=255) cgtcgCCGCGCTCGTGAGTGTGCCGTCCAGGCGCTCTACTCCTGGCAGTTGTCCCAGAACGACATCGCTGATGTTGAATACCAGTTCCTGGCTGAACAGGATGTAAAAGACGTTGACGTCTTGTACTTCCGTGAGCTGCTTGCCGGGTTGGCGACTAATCCCGCATACCTCTACGTACTGATGAAGCCATACCTTTCCCGCCTGCTAGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTgcgc < 1:332693/250‑1 (MQ=255) gtgtGCCGTCCAGGCGCTCTACTCCTGGCAGTTGTCCCCGAACGACATCGCTGCTGTTGAATACCAGTTCCTGGCTGAACAGGATGTAAAAGCCGTTGACGTCTTGTACTTCCGTGAGCTGCTGGCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAAc > 1:421719/1‑251 (MQ=255) ntctACTCCTGGCAGTTGTCCCAGAACGACATCGCTGATGTTGAATACCAGTTCCTGGCTGAACAGGATGTAAAAGACGTTGACGTCTTGTACTTCCGTGAGCTGCTGGCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCAt > 1:115217/2‑250 (MQ=255) gaCTCCTGGCAGTTGTCCCAGAACGACATCGCTGATGTTGAATATCAGTTCCTGGCGGAACAGGATGTAAAAGACGTGGACGTCTGGTCCTTCCGTGGGCTCCTGGCCGGGGTGGCGACTAATACCGCATGCCTCGAAGGACTGATGAAGCCATACCTGGCCCGCCGGCTGGAAGAACTGGGACAGGTAg < 1:133666/189‑1 (MQ=255) ccTGGCAGTTGTCCCAGAACGACATCGCTGATGTTGAATACCAGTTCCTGGCTGAACAGGATGTAAA‑GACGTTGACGTCTTGTACTTCCGTGAGCTGCTGGCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCAGACAAAGTgg < 1:97644/251‑1 (MQ=255) cTGGCAGTTGTCCCAGAACGACATCGCTGATGTTGAATACCAGTTCCTGGCTGAACAGGATGTAAAAGCCGTTGACGTCTTGt > 1:71815/1‑83 (MQ=255) ttGAATTCCAGTTCCTGGCTGAACAGTATGTAAAAGACGTTGGCGTCTTGTACTTGCGTGAGGTGCTGGCCGGGGTGGCGACTAATACCGCATTCCTCGACGGACTGATGAAGTCATGCCTGGCCCGCCTGCTGGAAGAACTGGTACAGGTAGAAAAATCAGTACTGCTCATTGTGCTTTACGAACTGTCTAAACGTATCGATGTGCCATACTAAGTGTCCATTAACGAAGCGATCGAACTGGCGAAATc < 1:297641/250‑1 (MQ=255) cTGGCTGAACTGGATGTAAAAGCGGTTGACGTCTTGTCCTTCCGTGAGTTGATGGGCGGGGTGGCGGCTAGTACCGCAGACGTGGTAGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTATAAACGTAGCGATGTGCCATAAAAAGTGGCCATTACCGCAGCGATCg > 1:404290/1‑223 (MQ=255) aaaaGACGTTGACGTCTTGTACTTCCGTGAGCTGCTGGACGGGGTGGCGACTAATACCGCATCACTCGACGGACTGATGCAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTa > 1:322321/1‑194 (MQ=255) | GCAACAAAGGTGCAGAAGCTGCACTGACCGCGCTTGAAATGATTAATGTATTGAAAGCCATCAAGGCCTGAAATTAGTAAGGGGAAATCCGTGAAACCTGCTGCTCGTCGCCGCGCTCGTGAGTGTGCCGTCCAGGCGCTCTACTCCTGGCAGTTGTCCCAGAACGACATCGCTGATGTTGAATACCAGTTCCTGGCTGAACAGGATGTAAAAGACGTTGACGTCCTGTACTTCCGTGAGCTGCTGGCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATCGAACTGGCGAAATC > NC_000913/435047‑435474 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |