| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,501,834 | C→T | intergenic (+245/+269) | yjgZ → / ← insG | uncharacterized protein YjgZ/IS4 family putative transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,501,834 | 0 | C | T | 100.0% | 59.5 / NA | 21 | intergenic (+245/+269) | yjgZ/insG | uncharacterized protein YjgZ/IS4 family putative transposase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (10/11); total (10/11) | |||||||||||
CCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGCTAGAGCAGTAAACACGCGGGCTGACAATGGGTCAGAATATGAGTTAGCCCGGCGTTATTCCTGGGGTCAGTACTTCAGATCTAGCCTCCGGTACCAGACTAGCTAGCCCCTACGCAACCAAATAAATCAACCATCGTCAGAGTGCAATCGTTCATATACACTGTCGGTGATGCGCTAAAAAATGCGTTAATGTTGAGTTCCTCGAACCCTTACCAATTAAGGGACATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGACAAAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAAC > NC_000913/4501623‑4502068 | ccATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGCTAGAGCAGTAAACACGCGGGCTGACAATGGGTCAGAATATGAGTTAGCCCGGCGTTATTCCTGGGGTCAGTACTTCAGATCTAGCCTCCGGTACCAGACTAGCTAGCCCCTACGCAACCAAATAAATCAACCATCGTCAGAGTGCAATCGTTCATATACACTGTTGGTGATGCGCTAAAAAATGc < 1:242643/232‑1 (MQ=255) ntAAACACGCGGGCTGACACTGGGTCAGAATATGAGTTAGCCCGGCGTTATTCCTGGGGTCAGTACTTCAGATCTAGCCTCCGGTACCAGACTAGCTAGCCCCTACGCAACCAAATAAATCAACCATCGTCAGAGTGCAATCGTTCATATACACTGTTGGTGATGCGCTaaaaaa > 1:111420/2‑175 (MQ=255) ggCTGACAATGGGTCAGAATATGAGTTAGCCCGGCGTTATTCCTGGGGTCAGTACTTCAGATCTAGCCTCCGGTACCAGACTAGCTAGCCCCTACGCAACCAAATAAATCAACCATCGTCAGAGTGCAAGCGTTCATATACTCTGTTGGTGATGCGCTAAAAAATGCGTTAAGGTTGAGTGCCTCGAACCCTTACCAAGTAATGGACATAGCGAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCtt < 1:416723/251‑1 (MQ=255) cTGACAATNGNNNANNATATGAGTTAGCCCGGCGTTATTCCTGGGGTCAGTACTTCAGATNTAGCCTCCGGTACCANACNAGCTNGCCNCTACGCAACCAAATAAATCAACCATCGTCAGAGTGCAATCGTTCATATACACTGTTGGTGATGCGCTAAAAAATGCGTTAATGTTGAGTTCCTc > 2:310259/1‑183 (MQ=255) cTGACAATGGGTCAGAATATGAGTTAGCCCGGCGTTATTCCTGGGGTCAGTACTTCAGATCTAGCCTCCGGTACCAGACTAGCTAGCCCCTACGCAACCAAATAAATCAACCATCGTCAGAGTGCAATCGGTCATATACACTGTTGGTGATGCGCTAAAAAATGCGTTAATGTTGAGTTCCTc < 1:310259/183‑1 (MQ=255) cGTTATTCCTGGGGTCAGTACTTCAGATCTCGCCTCCGGTACCAGACTAGCTAGCCCCTACGCAACCAAATAAATCAAACATCGTCAGAGTGCAATCGTTCATATCCACTGTTGGTGATGCGCTAAAAAATGCGTTAATGTTGAGTTCCTCGAACCCTTACCAATTAAGGGCCATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCa > 1:394461/1‑250 (MQ=255) ncTGGGGTCAGTACTTCAGATCTAGCCTCCGGTACCAGACTAGCTAGCCCCTACGCAACCACATAAATCAACCATCGTCAGAGTGCAATCGTTCATATCCACTGTTGGTGATGCGCTAAAAAATGCGTTAATGTTGAGTTCCTCGAACCCTTACCAATTAAGGGACATAGCCa > 1:93101/2‑173 (MQ=255) ccTGGGGTCAGTACTTCAGATCTAGCCTCCGGTACCAGACTAGCTAGCCCCTACGCAACCAAATAAATCAACCATCGTCAGAGTGCAATCGTTCATATACACTGTTGGTGATGCGCTAAAAAATGCGTTAATGTTGAGTTCCTCGaa > 1:307443/1‑147 (MQ=255) ccTGGGGTCAGTACTTCAGATCTAGCCTCCGGTAACAGACTAGCTAGCCCCTACGCACNCAANTCAANCANCCATCGTCAGAGTGCNATCGTTCATATACTCTGTTGGTGATGCGCTAAAAAATGCGTTAANNTNNNGNTCCTCGaa < 2:307443/147‑1 (MQ=255) aCTTCAGATCTAGCCTCCGGTACCAGACTAGCTAGCCCCTACGCAACCAAATAAATCAACCATCGTCAGAGTGCAATCGTTCATATACACTGTTGGTGATGCGCTAAAAAATGCGTTAATGTTGAGTTCCTCGAACCCTTACCAATTAAGGGACATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATg < 1:386286/222‑1 (MQ=255) ctgTACCAGACTAGCTAGCCCCTACGCAACCAATTAAATCAACCATCGTCAGAGTGCAATCGTTCATATACACTGTTGGTGATGCGCTAAAAAATGc > 1:360316/3‑97 (MQ=255) ccAGACTAGCTAGCCCCTACGCAACCAAATAAATCAACCATCGTCAGAGTGCAATCGTTCATATACACTGTTGGTGATGCGCTAAAAAATGCGTTAATGTTGAGTTCCTCGAACCCTTACCAATTAAGGGACATAGCCAGATACGCAACTGGCTGATGCAAGCAGCCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGc < 1:21097/228‑1 (MQ=255) aCGCAACCAAATAAATCAACCATCGTCAGAGTGCAATCGTTCATATACACTGTTGGTGATGCGCTAAAAAATGCGTTAATGTTGAGTTCCTCGAACCCTTACCAATTAAGGGACATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGTTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGACAAAAAAGCTCAGTATtc < 1:6646/249‑1 (MQ=255) taaatCAACCATCGTCAGAGTGCAATNGTTCATNNACNCTGTTGGTGATGCGCTAAANAANNNGNNNANGTTGGNTTNNTCGAACCCTNACCAATTAAGGGACATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATNTCTTTAGATNNCCTGGCCTGCGGGCATGACAANGTCNNANNGNCAANGan > 2:98470/1‑192 (MQ=255) taaatCAACCAGCGTCAGAGTGCAATCGTTCATATACACTGTTGGTGATGCGCTAAAAAATGCGTTAATGTTGAGTTCCTCGAACCCTTACCAATTAAGGGACATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGGCAGTCTTg < 1:98470/216‑1 (MQ=255) cAACCATCGTCAGAGTGCAATCGTTCATATACACTGTTGGTGATGCGCTAAAAAATGCGTTAATGTTGAGTTCCTCGAACCCTTACCAATTAAGGGACATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATg > 1:64712/1‑172 (MQ=255) aCCATNGTCAGNGNNCAATCGTTCATATACACTGNTGGTGATGCGCTAAANAATGNGTTAANGTNg > 2:187242/1‑66 (MQ=255) aCCATCGTCAGAGTGCAATCGTTCATATACACTGTTGGTGATGCGCTAAAAAATGCGTTAATGTTGAGTGCCTCGAACCCTTACCAATTAAGGGACATAGCCAGATACGCAACTGGCTGa < 1:187242/120‑1 (MQ=255) cGTTCATATACACTGTTGGTGATGCGCTAAAAAATGCGTTAATGTTGAGTGCCTCGAACCCTTACCAATTAAGGGACATAGCCAGATACGCAACTGGCTGATGCAAGCAGTc < 1:299383/112‑1 (MQ=255) cGTTCATATACACTGTTGGTGATGCGCTAAAAAATGCGTTAACGTTGAGTTCCGCGAACCCTTACCAATTAAGGGACATAGCCAGATACGAAACTGGCTGATGCAATCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCTAACAGTCAAAGATTGTGGCGTTGACTGTCTGTCTTGGGGACAATAAAGCTCAGTATTCTCGTTGGCAACCAGATAATGTAACAGTTGATGCTGAAAc < 1:366475/251‑1 (MQ=255) cATATACACTGTTGGTGATGCGCTAAAAAATGCGTTAATGTTGAGTTCCTCGAACCCTTACCAATTAAGGGACATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCgg > 1:16445/1‑136 (MQ=255) | CCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGCTAGAGCAGTAAACACGCGGGCTGACAATGGGTCAGAATATGAGTTAGCCCGGCGTTATTCCTGGGGTCAGTACTTCAGATCTAGCCTCCGGTACCAGACTAGCTAGCCCCTACGCAACCAAATAAATCAACCATCGTCAGAGTGCAATCGTTCATATACACTGTCGGTGATGCGCTAAAAAATGCGTTAATGTTGAGTTCCTCGAACCCTTACCAATTAAGGGACATAGCCAGATACGCAACTGGCTGATGCAAGCAGTCTAATGTCTTTAGATCCGCTGGCCTGCGGGCATGACAATGTCAAACAGTCAAAGATTGTGGCGTTGACGGTCAGTCTTGGGGACAAAAAAGCTCAGTATTCTCGTTGGCAACCAGATAATTTAACAGTTGATGCTGAAAC > NC_000913/4501623‑4502068 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |