| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,396,772 | T→C | F236F (TTT→TTC) | amiB → | N‑acetylmuramoyl‑L‑alanine amidase B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,396,772 | 0 | T | C | 100.0% | 57.0 / NA | 18 | F236F (TTT→TTC) | amiB | N‑acetylmuramoyl‑L‑alanine amidase B |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (7/11); total (7/11) | |||||||||||
CGTTTAAAACGGAAAGTAACCGCACTACGGGTGTTATCAGCAGTAATACGGTAACGCGTCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCGACTGGCGCTTCCGTATGGGTGCTCTCTAACCGTCGCGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAG > NC_000913/4396543‑4396967 | cGTTTAAAACGGAAAGTAACCGCACTACGGGTGTTATAAGCAGTAATACGGTAACGCGTCCGGCAGCGCGCGCGACGGCTAACACTGGAGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATAGGTCCCGGTGGTAAGCGGGAGAAAAATGTCACCATAGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCggga > 1:433247/1‑247 (MQ=255) ggTGTTATCAGCAGTAATACGGTAACGCGTCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAAGTGCGTACTTTGCGCAATGACGATCCGATGTTCAAAGGCGTGTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGgcg < 1:387562/251‑1 (MQ=255) gTAATACGGTAACGCTGCCGGCAGCGCGCTCGACGTCGAACACGGGCGATAAAATGATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGGACGCGGGAGAAAAAGGTCACCATGGTCGTCGCGCGTAAAGTGCGTACTTTGCTCGATGACGATCCGTTGTGCATAGGCGTTGTAACCCGTGACTGTGATGACTGTATCTCGGTGATGGGGCGCAGTGATGTGGcn < 1:53222/251‑2 (MQ=255) ncGGTAACGCGTCCGGCAGCGCGCGCGACGGATAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGACGCTATCGGCCCCGGTGGTACGCGGGACAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGAATACTTTCTCTCGGTGCTGGGGCGCAGGGATGTGGCACGTa > 1:52758/2‑250 (MQ=255) aCGGTAACGCGTCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCg < 1:302438/200‑1 (MQ=255) aCGGTAACGCGTCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGGGGTACGCGGGAGAAAAATGTCACCATCGCCAGCGCGCGGAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAAc < 1:406170/197‑1 (MQ=255) ggTAACGCGTCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTTATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCAGCGCGCGTAAATTGCGTACTTTGCTCAAGGACGATCCGATGTGCAAATGCGGTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGc < 1:385650/251‑1 (MQ=255) ngCAGCGCGCGCGACGGCTAACACTGGCGGTAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGGGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTg > 1:112131/2‑188 (MQ=255) gcgACGGCTAACACTGTCGATAAAATGATCATCGCTATTGATGCTGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGTTGGTACGCGGGAGAAAAAGTTCACCATCGCCATCGCGCGTAAAGTGCGCACTGTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTGATCTCGGTGATGGGGCGCATGGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTc < 1:303800/251‑1 (MQ=255) gCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGCCACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGCGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCCAAACGCCCATTTCCTCGTGACGATTcc > 1:168001/1‑250 (MQ=255) cggcggTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGAtn < 1:88223/154‑2 (MQ=255) cgcTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCATACCGAACCGCAGTGCGACTGGCGCTTCCGTATGGGTGCTCTCTAACCGNc < 1:348540/251‑1 (MQ=255) aCGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCGACTGGCGCTTCCGTATGGGTGCTCTCTAACCGTCTCGCCAACAGTGAAATGGc < 1:151645/251‑1 (MQ=255) gagaAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAg > 1:120635/1‑70 (MQ=255) aTGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCGCAAGGACGATCCGATGTTCAAAGGCGGTTTAACCCGTGACGGGGATTACTTTATCTCGGTGAGGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCGACTGGCGCTTCCGTATGGGTGCTCTCTAACCGTCGCGCCAACAGTGAAATGGCCAGCTGGCTGGan < 1:50320/251‑2 (MQ=255) gTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGc < 1:388297/134‑1 (MQ=255) cncgTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCAc > 1:349930/1‑140 (MQ=255) cgcgTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCGACTGGCGCTTCCGTATGGGTGCTCTCTAACCGTCGCGCCAACAGTGAAAGGGCCAGCTGGCTGGagcag > 1:98741/1‑236 (MQ=255) | CGTTTAAAACGGAAAGTAACCGCACTACGGGTGTTATCAGCAGTAATACGGTAACGCGTCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCGACTGGCGCTTCCGTATGGGTGCTCTCTAACCGTCGCGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAG > NC_000913/4396543‑4396967 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |