| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,558,699 | Δ6,790 bp | intZ–[eutA] | intZ, yffL, yffM, yffN, yffO, yffP, yffQ, yffR, yffS, [eutA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2558699 | 2565488 | 6790 | 15 [0] | [1] 16 | intZ–[eutA] | intZ,yffL,yffM,yffN,yffO,yffP,yffQ,yffR,yffS,[eutA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2558698 | 0 (0.000) | 15 (0.900) | 15/276 | 0.1 | 100% | intergenic (‑19/‑160) | eutB/intZ | ethanolamine ammonia‑lyase subunit alpha/putative phage integrase IntZ |
| ? | NC_000913 | 2565489 = | 0 (0.000) | coding (1396/1404 nt) | eutA | ethanolamine ammonia‑lyase reactivase EutA | |||||
AAGCTGGGAGACGAATAAACCAGCCTTCAACCCCATCTCATCAATCAACGCCCGGCCCCGCTGCCGGGTTTTTGCTATGCACCACAATTACCCCAACCGGATACACAGCCGGATACAATTCCACCAGCACCCAGCCACCCAGCGCCACCGCTGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCG > NC_000913/2565315‑2565706 | gacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGatat > 1:361563‑M2/175‑243 (MQ=255) cctgctttgccgccacgctctcctgtgagcttgccgctgcgacgcccgccagtacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAAt > 1:64895‑M2/168‑172 (MQ=255) cggtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATc < 1:4728‑M2/39‑1 (MQ=255) gcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttgactttagccagcacctcttttacatccttaaactgatatacattgccgaacactgtggtctttagtttcataagtcgttccctcaggcagGAAATGCGAGCGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGCACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACgg > 1:203174‑M2/140‑251 (MQ=255) gccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatcctaaaactgatatacatggccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCCCCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCTATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTggg < 1:410520‑M2/131‑1 (MQ=255) ccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGgc < 1:428642‑M2/132‑1 (MQ=255) agcacatcccccgaacgcagttcgttagctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGAc > 1:119871‑M2/118‑220 (MQ=255) cagttcgttggctttagccagcacctcttttacatccttaaactgatataaattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtc > 1:401181‑M2/101‑117 (MQ=255) gttcgttggctttagccagcacctcttttacatccttaaactgatatacactgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGcaaca > 1:62812‑M2/99‑236 (MQ=255) gttggctttagccagcacctcttttacatccttaaactgatatacattgccgcacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCtgt > 1:138954‑M2/95‑222 (MQ=255) tttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttcccgcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGccaccac < 1:161425‑M2/178‑1 (MQ=255) ccttaaactgatatacattgccgaacaatgtggtctttagtgtcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAggg < 1:362721‑M2/186‑1 (MQ=255) gatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGc < 1:142520‑M2/106‑1 (MQ=255) gtcttttgtttcataagtcgttccctCAGGAAGGAAACGCGTGTGATTCCACGGCCACAGGCCCCGCCGACCGGCCAAAGACAGGCGTACCAAAGTGGCTATAGCCACCCCCGCGGACAATTCCTTCGTCAATGCCTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACACAATGCCCAGCGCTTTACCAAAAACATGCCCGGCCACCACCAAAAGGGGATGCGCATTCGGCAAACGCGCGACGAAATCg > 1:408424/26‑251 (MQ=255) tttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACggg < 1:210469‑M2/113‑1 (MQ=255) gttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGAACAACCGAACAGCCAACCAGAGGCGTACAACTGACGATATAGTCACACGAGCGGACAATCACTTCGTCAATGCCTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCa > 1:292316‑M2/15‑172 (MQ=255) | AAGCTGGGAGACGAATAAACCAGCCTTCAACCCCATCTCATCAATCAACGCCCGGCCCCGCTGCCGGGTTTTTGCTATGCACCACAATTACCCCAACCGGATACACAGCCGGATACAATTCCACCAGCACCCAGCCACCCAGCGCCACCGCTGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCG > NC_000913/2565315‑2565706 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |