| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 3,890,892 | IS1 (+) +9 bp | coding (657‑665/1248 nt) | tnaB → | tryptophan:H(+) symporter TnaB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3583428 = | NA (NA) | 11 (0.870) | 11/310 | 0.1 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 3890900 | 0 (0.000) | coding (665/1248 nt) | tnaB | tryptophan:H(+) symporter TnaB | |||||
| * | ? | NC_000913 | = 3584195 | NA (NA) | 19 (1.510) | 16/310 | 0.0 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 3890892 = | 0 (0.000) | coding (657/1248 nt) | tnaB | tryptophan:H(+) symporter TnaB | |||||
ATTGTGGTTAAGTTCGTTAGCCGCCAGTCGTATTACCTCATTGTTCCTCGGGCTGAAGATTATCTCCTTTGTGATCGTGTTTGGTTCTTTTTTCTTCCAGGTCGATTACTCCATTCTGCGCGACGCCACCAGCTCCACTGCGGGAACGTCTTACTTCCCGTATATCTTTATGGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGCAAAGATAAGTTAATCAAAAGCGTGGTATTTGGTTCGCTGCTGGCGCTGGTGATTTATCTCTTCTGGCTCTATTGCACCATGGGGAATATTCCGCGAGAAAGCTTTAAGGCGATTATCTCCTCAGGCGGCAACGTTGATTCGCTGGTGAAATCGTTCCTCGGCACCAAACAGCACGGCATTATCGAGTTTTGCCTGCTGGTGTTCTCTAA > NC_000913/3890655‑3891110 | aTTGTGGTTAAGTTCGTTAGCCGCCAGTCGTATTACCTCATTGTTCCTCGGGCTGAAGATTATCTCCTTTGTGATCGTGTTTGGTTCTTTTTTCTTCCAGGACGATTACTCCATTCTGCGCGACGCCACCAGCTCCACTGCGGGAACGTCTTACGTCCCGTATATCTTTAGGGCTTTGCCGGTGTTTCTGGCGTCATTTGGTTTCCACGTCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGggtg > 1:284463‑M2/1‑246 (MQ=255) gatggctggacgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGGAAAACGCAAAGATAAg > 1:133725‑M2/220‑238 (MQ=255) ggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGGAAAACGCAAAGATAAGTTAATCAAAAGCGTGGTAtt > 1:66484‑M2/213‑251 (MQ=255) aaacccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGGAAAACGCAAAGATAAGTTAATCAAAAGCGTgg < 1:76211‑M2/35‑1 (MQ=255) naagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgcggcagcacatggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGGAAAACGCAAAGATAAGTTAATCAAAAGCGTGGTATTTGGTTCGCTGCTGGCGCTGGTGATTTAt > 1:51604‑M2/185‑251 (MQ=255) gctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGGAAAACGCAAAGATAAGTTAATCAAAAGCGTGGTATTTGGTTCgctg < 1:85893‑M2/49‑1 (MQ=255) aTTATCTCCTTTGTGATCGTGTTTGGTTCTTTTTTCTTCCAGGTCGATTACTCCATTCTGCGCGACGCCACCAGCTCCACTGCGGGAACGTCTTACTTCCCGTATATCTTTATGGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttc > 1:23793‑M2/1‑188 (MQ=255) gcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGGAAAACGCAAAGATAAGTTAATCAAAAGCGTGGTATTTGGTTCGCTGCTGGCGCTGGTGATTTATCtcttc > 1:44720‑M2/179‑251 (MQ=255) cGTGTTTGGTTCTTTTTTCCTCCAGGTCGATTACTCCATTCTGCGCGACGCCACCAGCTCCTCTGCGGGCACGTCTTACTTCCCGTATATCTTTATGGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcctgtggcttctgtttctatcagctgt > 1:146800‑M2/1‑171 (MQ=255) tcttcCAGGTCGATTACTCCATTCTGCGCGACGCCACCAGCTCCACTGCGGGAACGTCTTACTTCCCGTATATCTTTATGGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctac > 1:261861‑M2/1‑154 (MQ=255) gATTACTCCATTCTGCGCGACGCCACCAGCTCCACTGCGGGAACGTCTTACTTCCCGTAGATCTTTATGGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATAGTCCCAGCCTGATTATTTGCTAt < 1:100885/135‑1 (MQ=255) ctgaatctgaggcagcacctggcacggctgggacggacgtcactgtcgttctcaaaatcggtgcagctgcatgacaacgtcatcgggcattatctgaacctaaaacactatcaataagttggcgtccttaccTGGAAAACGCACAGATAAGTTAATCAAAAGCGTGGTATTTGGTTCGCTGCTGGCGCTGGAGATTTATCTCTTCTGGCTCTATTGCACCATGGGGAATATTCCGCGAGAAAGCTTTAAgg > 1:112772‑M2/133‑251 (MQ=255) ggcagcccctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgtgcattatctgaacataaaacactatcaataagttggaggcattaccTGGAAAACGCAAAGATAAGTTAATCAAAAGCGTGGTATGTGGTTCGCTGCTGGCTCTGGTGAGTTATCTTTTCGGGTTCTATTGCACCATGGGGAATATTCCGCGAGAAAGCTTTAAGGCTATTAtctc < 1:47691‑M2/129‑1 (MQ=255) ncctggcacggctgggacggaagtcgctgtcgttctcaccatcggtggaaatgcatgaccaagtcatcgggcattctctgaacataaaacactatcaataagttggagtcattaccTGGAAAACGCAAAGATAAGTTAATCAAAAg > 1:54900‑M2/117‑146 (MQ=255) cctggcacggctgggacggaagtcgctgtcgatctcacaatcggtggaactgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGGAAAACGCAAAGTTAAGTTAATCAAAAGCGTGGTATTTGGTTCGCTGCTGGCGCTGGTGATTTATCTCTTCTGGCTCTATTGCACCATGGGGAATATTCCGCGAGAAAGCTTTAAGGCGATTATCTCCTCAggc > 1:234692‑M2/116‑251 (MQ=255) cGCCACCAGCTCCACTGCGGGAACGTCTTACTTCCCGTATATCTTTATGGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccg < 1:68734‑M2/251‑129 (MQ=255) nctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGGAAAACGCAAAGATAAGTTaa > 1:171438‑M2/107‑129 (MQ=255) gctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGGAAAACGCAAAGATAAGTTaa < 2:171438‑M2/23‑1 (MQ=255) cTCCACTGCGGGAACGTCTTACTTCCCGTATATCTTTATGGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgagg > 1:96137‑M2/1‑114 (MQ=255) gggAACGTCTTACTTCCCGTATATCTTTATGGCTTTGCCGGGGTGTCTGGCGTCATTTGGATTCCACGGCAATATTCCCCGGCTGATTATTTTCTATGGAAAACGggtgatgctgcccactttctgatttcgtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcaactgtccctcctgttccgctactgacggggtggtgcgtaaaggcaaaa < 1:164097‑M2/227‑123 (MQ=255) ctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgcacataaaacactaacactaagttggagtcattaccTGGAAAACGCAAAGATAAGTTAATCACACGCGTGGTATTTGGTTAGCTGCTGGAGCTGGTGATTTATCTCTTCTGGCTCTATTGAACCATGGGGAATATTCCGCGAGAAAGCTTTAAGGCGATTATCTCCTCAGGCGGCAACGTTGATTCGCTGGTGAAAt > 1:205403‑M2/91‑251 (MQ=255) gttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGGAAAACg > 1:20209‑M2/86‑94 (MQ=255) gttcnnaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGGAAAACg < 2:20209‑M2/9‑1 (MQ=255) tCCCGTATATCTTTATGGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcacng > 1:225440‑M2/1‑91 (MQ=255) aaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGGAAAACGCAAAGATAAGTTAATCAAAAGCGTGGTATTTGGTTCGCTGCTGGCGCTGGTGATTTATCTCTTCTGGCTCTATTGCACCATGGGGAATATTCCGCGAGAAAGCTTTAAGGCGATTATCTCCTCAGGCGGCAACGTTGATGCGCTGGTGAAATCGTTCCTCGGc < 1:223453‑M2/172‑1 (MQ=255) aatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGGAAAACGCAAAGATAAGTTAATCAAAAGCGTGGTATTTGGTTCGCTGCTGGCGCTGGTGATTTATCTCTTCTGGCTCTATTGCACCATGGGGAATATTCCGCGAGAAAGCTTTAAGGCGATTATCTCCTCAGGCGGCAACGTTGATTCGCTGGTGAAATCGTTCCTCGGCAc < 1:185533‑M2/174‑1 (MQ=255) tATGGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGggtgaggctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatgg > 1:248278‑M2/1‑78 (MQ=255) gtgtCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGggtgatgcggccaacttactgatttagtgtatgatggtgatttggaggtgctccagtggcttctgtgtctagcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcgccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcactt > 1:293055‑M2/1‑63 (MQ=255) cattatctgaacataaaaaactatcaataagttggagtcattaccTGGAAAACGCAAAGATAAGTTAATCAAAAGCGTGGTATTTGGTTCGCTGCTGGCGCTGGTGATTTATCTCTTCTGGCTCTATTGCACCATGGGGAATATTCCGCGAGAAAGCTTTAAGGCGATTATCTCCTCAGGCGGCAACGTTGATTCGCTGGTGAAATCGTTCCTCGGCACCAAACAGCACGGCATTATCGAGTTTTGCctgc > 1:20808‑M2/46‑251 (MQ=255) cACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttccgctactgacggggcggcgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggccactgcagttcacttacaccgcttctcaacccggtac < 1:290841‑M2/251‑211 (MQ=255) attaccTGGAAAACGCAAAGATAAGTTAATCAAAAGCGTGGTATTTGGTTCGCTGCTGGCGCTGGTGATTTATATCTTCTGGCTCTATTGAACAATGGGGAATATTCCGCGAGAAAGCTTTAAGGAGATTATCTCCTCAGGCGGCAACGTTGATTCGCtgga > 1:160278‑M2/7‑161 (MQ=255) | ATTGTGGTTAAGTTCGTTAGCCGCCAGTCGTATTACCTCATTGTTCCTCGGGCTGAAGATTATCTCCTTTGTGATCGTGTTTGGTTCTTTTTTCTTCCAGGTCGATTACTCCATTCTGCGCGACGCCACCAGCTCCACTGCGGGAACGTCTTACTTCCCGTATATCTTTATGGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGCAAAGATAAGTTAATCAAAAGCGTGGTATTTGGTTCGCTGCTGGCGCTGGTGATTTATCTCTTCTGGCTCTATTGCACCATGGGGAATATTCCGCGAGAAAGCTTTAAGGCGATTATCTCCTCAGGCGGCAACGTTGATTCGCTGGTGAAATCGTTCCTCGGCACCAAACAGCACGGCATTATCGAGTTTTGCCTGCTGGTGTTCTCTAA > NC_000913/3890655‑3891110 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |