Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3039113	3039244	132	2 [1]	[1] 3	xerD	site‑specific recombinase

CAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACGCAGCCCGGTAGCATACAACACTTCAAGCAT  >  NC_000913/3039233‑3039332             |                                                                                        cAATGAGCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACGc                               >  1:41194/1‑71 (MQ=255)             ccACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACGCAGCCCGGTAGCATACAACACTTCAAGCAt  >  2:13451/1‑88 (MQ=255)             ccACGCCCTGACGCAGCCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACAAGCAGCCCGGTAGCATACAACACTTCAAGCAt  <  1:13451/88‑1 (MQ=255)             |                                                                                        CAATGACCCGTACCACGCCCTGACGCAGGCTGATATCACTCATTGTCAGTCCGACCAGTTCAGAGACACGCAGCCCGGTAGCATACAACACTTCAAGCAT  >  NC_000913/3039233‑3039332

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑