Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	4541800	4541917	118	2 [1]	[1] 2	fimB/fimE	Type 1 fimbriae regulatory protein FimB/regulator for fimA

GTTAAAAACTACATTATTCTTACGATATATCAAAAATGATTAACCATTTATTAATTGATGTTATTGTAAGTGTGATTCTTAATTATCATAATAAACATTAAGTTAACCATATCCATACAAAATACAATGGTTTATGTTCTTCAAAATAAATAAACAAAATCATTCATAAATTTACACATCACTTAAAATCTCCTGTTTCCGCACTTTTTTCTTTATTTTTTAAGCAACTGGAAGTTAATCCACTGCAATCTATTGTTATATTGAATCAAATCAATGAAAAT  >  NC_000913/4541585‑4541865                                                                                                                                                                                                                       |                                                                   gtTAAAAACTACATTATTCTTACGTTCTCTCAACAATGATTCACCATTTATTCATTGATGCTATTGTAAGTGTGATTCTTAATTATCATAATAAACATTAAGTTCACCATATCCATACAAAATACAATGGTTTCTGTTCTTCAAAATAAATAAACAACATCATTCATAAATTTACACATCACTTAACATCTCCTGTTTCCACACTTTTTTCTTTa                                                                    >  1:162587/1‑215 (MQ=255)                                aaaaaTGATTAACCATTTATTAATTGATGTTATTGTAAGTGTGATTCTTAATTATCATAATAAACATTAAGTTAACCATATCCATACAAAATACAATGGTTTATGTTCTTCAAAATAAATAAACAAAATCATTCATAAATTTACACATCACTTAAAATCTCCTGTTTCCGCACTTTTTTCTTTATTTTTTAAGCAACTGGAAGTTAATCCACTGCAATCTATTGTTATATTGAATCAAATCAATGAAAAt  >  1:84210/1‑250 (MQ=255)                                                                                                                                                                                                                       |                                                                   GTTAAAAACTACATTATTCTTACGATATATCAAAAATGATTAACCATTTATTAATTGATGTTATTGTAAGTGTGATTCTTAATTATCATAATAAACATTAAGTTAACCATATCCATACAAAATACAATGGTTTATGTTCTTCAAAATAAATAAACAAAATCATTCATAAATTTACACATCACTTAAAATCTCCTGTTTCCGCACTTTTTTCTTTATTTTTTAAGCAACTGGAAGTTAATCCACTGCAATCTATTGTTATATTGAATCAAATCAATGAAAAT  >  NC_000913/4541585‑4541865

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑