Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3543192	3543278	87	2 [0]	[1] 2	rpnA	recombination‑promoting nuclease RpnA

CGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATACACAGGTGTGGAGTGGCGCGTAGAGTCGCGGCATTCAAACAACAGGTGAAGGAACGCCATGAGCAAAAAGCAGAGTTCCACCC  >  NC_000913/3542941‑3543191                                                                                                                                                                                                                                                           | cgcgACTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCAGATTTGGACAGCCAGGTCAGCGTCAGCATACGGACTTTTTCGCGAGCAACTTTCCCTAACAGTCCAACTCTCGCATAACGACGTCAGCTACTTTGAATGCATCAAGCAGGGATGAAAACTCGCTAATACACAGGTGTCGCGTGGCGCGTAGAGTCGCGGCATTCAAACACCAGCTGAAAGAACGCCATGAGCCAAAAGCAGAGTTCCAccc  >  1:169506/1‑251 (MQ=255)                                                     ccGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATACACAGGTGTGGAGTGGCGCGTAGAGTCGCGGCATTCAAACAACAGGTGAAGGAACGCCATGAGCAAAAAGCAGAGTTCCAccc  >  1:156913/1‑199 (MQ=255)                                                                                                                                                                                                                                                           | CGCGAGTGGTGGGCGCTGCGTTAACCTTACTCCATCGCCTGTTTTGGAAAGCCCGGTATGCGTCTGCATCCGGGCTTTTTTGCGTGCGGCTTTCCATAAAAATGCAACTCTTGCAGCACGGCGTAAGTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATACACAGGTGTGGAGTGGCGCGTAGAGTCGCGGCATTCAAACAACAGGTGAAGGAACGCCATGAGCAAAAAGCAGAGTTCCACCC  >  NC_000913/3542941‑3543191

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑