New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 732239	57 (0.620)	7 (0.080)	6/562	7.2	12.5%	coding (2657/4194 nt)	rhsC	rhs element protein RhsC
	?	NC_000913	732420 =	43 (0.480)					coding (2838/4194 nt)	rhsC	rhs element protein RhsC
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCCGTGGAATGGCTGACCTACGGCAGCGGCTGGCTGTCAGGCATGAAACTCGGCGACACACCGCTGGTGGAGTACACCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGA‑ACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGC  >  NC_000913/731953‑732533                                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                                                         gctgTGGAATGGCTGACCTACGGCAGCGGCTGGCTGTCAGGCATGAAACTCGGCGACACACCGCTGGTGGAGTACACCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGA‑ACTCACCACCGCTTATACCCCGGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGAACGCGATTACACCTGGAATGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCAcacc                                                                                                                                                                                                                                                                                             <  1:33106/297‑1 (MQ=255) gccgTGGAATGGCTGACCTACGGCAGCGGCTGGCTGTCAGGCATGAAACTCGGCGACACACCGCTGGTGGAGTACACCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGA‑ACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCacac                                                                                                                                                                                                                                                                                              <  1:700503/299‑1 (MQ=35) gccgTGGAATGGCTGACCTACGGCAGCGGCCGGCTGTCAGGCATGAAACTCGGCGACACACCGCTGGTGGAGTACACCCGCGACCGCCTGCACCTGTAAACGCTGCGCAGATTCGGCTGTTATGA‑ACTCACCACCGCTTATACCCCTGCCGGGCAGGTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGAACGCGATTACACTTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCAcacc                                                                                                                                                                                                                                                                                             <  1:33777/300‑1 (MQ=11)    gTGGAATGGCTGACCTACGGCAGCGGCTGGCTGTCAGGCATGAAACTCGGCGACACACCGCTGGTGGAGTACACCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGA‑ACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTNATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACaccacc                                                                                                                                                                                                                                                                                          >  1:543309/1‑300 (MQ=25)     tGGAATGGCTGACCTACTGCAGCGGCTGTCTGTCAGGCATGAAACTCTGCGACACACCGCTGGTGGAGTACACCCGCGACCACCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGA‑ACTCACCANCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACCCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCAcacc                                                                                                                                                                                                                                                                                             <  2:227581/296‑1 (MQ=255)                aCCTACGGCAGCGGCTGGCTGTCAGGCATGAAACTCGGCGACACACCGCTGGTGGAGTACACCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGA‑ACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCt                                                                                                                                                                                                                                                                               >  1:317084/1‑299 (MQ=35)                aCCTACGGCAGCGGCTGGCTGTCAGGCATGAAACTCGGCGACACACCGCTGGTGGAGTACACCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGA‑ACTCACCACCGCTTATACCCCTGCCGAGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAAGGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCCCCACCGGCAGGCTGAcagagacaaccgacctcctcccggaa                                                                                                                                                                                                                                                                                 >  2:112808/1‑272 (MQ=11)                             gctggctgTCAGGCATGNAACTCGGCGACACACCGCNGGTGGAGTACACCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGA‑ACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAANCTGGATATCCGCATcc                                                                                                                                                                                                                                                                 <  1:645075/300‑1 (MQ=18)                             gctggctgTCAAGCATGAAACTCTGCGACACACCGCTGTTGGAGTACACCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGA‑ACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATcc                                                                                                                                                                                                                                                                 <  2:473766/300‑1 (MQ=17)                                    gTCAGGCATGAAACTCGGCGACACACCGCTGGTGGAGTACACCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGA‑ACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAc                                                                                                                                                                                                                                                          >  1:17709/1‑300 (MQ=31)                                       aGGCATGAAACTCGGCGACACACCGCTGGTGGAGTACACCCGCGACCGCCTGCACCTGGAAACGCTGCGCAGCTTCGGCCGTTATGA‑ACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑cac                                                                                                                                                                                                                                                      <  2:484675/300‑1 (MQ=14)                                       aGGCATGAAACTCGGCGACACACCGCTGGTGGAGTACACCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGA‑ACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCACCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑cac                                                                                                                                                                                                                                                      <  2:666362/300‑1 (MQ=14)                                            tGAAACTCGGCGACACACCGCTGGTGGAGTACACCCGCGACCGCCTGCACCTGGAAACGCTGCGCAGCTTCGGCCGTTATGA‑ACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGNACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGAcc                                                                                                                                                                                                                                                 <  2:543309/300‑1 (MQ=14)                                                        acacacCGCTGGTGGAGTACACCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGA‑ACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCTCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑cc                                                                                                                                                                                                                                    >  1:243386/1‑300 (MQ=14)                                                          acacCGCTGGTGGAGTACACCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGA‑ACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCg                                                                                                                                                                                                                                   <  1:400485/299‑1 (MQ=31)                                                            acCGCTGGTGGAGTACACCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGA‑ACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGcc                                                                                                                                                                                                                                 <  1:692746/299‑1 (MQ=31)                                                                     ggAGTACACCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGA‑ACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTGTAC‑CACAGACCCGGCAGGTAA‑CCgacttccc                                                                                                                                                                                                                            >  1:253474/1‑288 (MQ=14)                                                                        gTACACCCGCGACCGCNTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGA‑ACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATANGCACAGACCCGGCAGGTANGCCGCCTGCCCgcgccc                                                                                                                                                                                                                      >  1:633912/1‑295 (MQ=9)                                                                          acacCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGA‑ACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTTGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGc                                                                                                                                                                                                                  <  2:340545/300‑1 (MQ=14)                                                                                  gACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGA‑ACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCg                                                                                                                                                                                                          <  1:528513/300‑1 (MQ=31)                                                                                                         gcgcAGCTTCGGCCGTTATGA‑ACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTCCAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCAGTATAC‑CACAGACACGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGc                                                                                                                                                                                    >  2:665733/1‑299 (MQ=17)                                                                                                                   gtccGTTATGACAC‑CACCACCGCTTAGACCCCTGCTGGGCAGGTACAGAGTAAGTAGCTGAACAACCGACTGTCTGACCGCGGGTACACTTGGAACGACAACGTCGAACTCATCCACATCAGTAGCACGCGCCATATTCGGAGTGACAGCTACAGCACCACCGGCAGGCGAACTGGAGTTCAGACCACTGCAGCGAATCTGGAGATCTGTATCCCGTATAC‑CAAACACCCGGCAGGTAA‑CCGCCGGCCCGACCCTGAGCGGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGt                                                                                                                                                                         <  2:425741/298‑1 (MQ=255)                                                                                                                       gTTATGA‑ACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCTGCATCTAGTATAC‑CAACGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCGGCCCCCGGAAAGCGCCCTCAGCATGTggaaggagaaacgtat                                                                                                                                                                       >  2:204760/1‑284 (MQ=11)                                                                                                                       gTTATGA‑ACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCAGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGATAGCGCCCTCAGCATGTGGCCGGATAACCGTATc                                                                                                                                                                      >  2:726334/1‑299 (MQ=17)                                                                                                                               aCTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGa                                                                                                                                                              >  1:353990/1‑300 (MQ=32)                                                                                                                                    ccaccGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACgcgc                                                                                                                                                         >  1:267217/1‑300 (MQ=32)                                                                                                                                          cTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCNTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATc                                                                                                                                                   >  1:161421/1‑300 (MQ=17)                                                                                                                                          cTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATc                                                                                                                                                   >  1:530288/1‑300 (MQ=32)                                                                                                                                          cTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCAGGATAACCGTATCGCCCGTGACGCGCACTATc                                                                                                                                                   >  1:608622/1‑300 (MQ=17)                                                                                                                                            tataCCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTTGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCTGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCTGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCtt                                                                                                                                                 <  2:675951/300‑1 (MQ=17)                                                                                                                                            tataCCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCtt                                                                                                                                                 <  2:676170/300‑1 (MQ=32)                                                                                                                                                   cTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGATGCGCACTATCTTTCCCGGt                                                                                                                                          >  2:749935/1‑300 (MQ=17)                                                                                                                                                    tGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTAcc                                                                                                                                             <  1:369279/296‑1 (MQ=32)                                                                                                                                                             gTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCNGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGGCGCGCACTATCTTTACCGGCATGACCGTCa                                                                                                                                >  2:252754/1‑300 (MQ=17)                                                                                                                                                             gTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCa                                                                                                                                >  1:596570/1‑300 (MQ=32)                                                                                                                                                                     gCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCacgc                                                                                                                        >  1:10224/1‑297 (MQ=17)                                                                                                                                                                          cACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCATCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCAAACCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCAaggcaggc                                                                                                                        >  2:339604/1‑295 (MQ=12)                                                                                                                                                                                  cAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCTCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCANGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAAc                                                                                                           >  1:558349/1‑300 (MQ=17)                                                                                                                                                                                                    cgactaaacCTAGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACTGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGTTGACAGAGAAAACCGACCTCAt                                                                                                  >  2:409760/8‑291 (MQ=12)                                                                                                                                                                                                           acCTGGAACGACAACGGCGAACTCGTCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGTCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATc                                                                                  <  2:377537/300‑1 (MQ=17)                                                                                                                                                                                                              tGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCATACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCTGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATcc                                                                                 <  2:340169/298‑1 (MQ=17)                                                                                                                                                                                                              tGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGc                                                                               >  1:613835/1‑300 (MQ=32)                                                                                                                                                                                                                 aaCGACAACTGCGAACTCATCCGCATCAGCAACCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCTGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACg                                                                            <  2:468150/300‑1 (MQ=17)                                                                                                                                                                                                                        actgCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCATGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGTAAGGGGTTATCCGCACGGatgatg                                                                     <  2:17709/297‑1 (MQ=17)                                                                                                                                                                                                                          ggCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCTGAAGGGGTTATCCGCACGGATGATGAg                                                                   <  2:77695/300‑1 (MQ=17)                                                                                                                                                                                                                                       gCATCAGCAGCCCGCGCCAGACCCGTAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCTGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGt                                                      <  1:356661/300‑1 (MQ=25)                                                                                                                                                                                                                                               agcCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTa                                               <  2:267217/299‑1 (MQ=35)                                                                                                                                                                                                                                               agcCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTa                                               <  1:252754/299‑1 (MQ=35)                                                                                                                                                                                                                                                           aCCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCTGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCAc                                  <  1:655836/300‑1 (MQ=25)                                                                                                                                                                                                                                                           aCCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCAc                                  <  1:767794/300‑1 (MQ=35)                                                                                                                                                                                                                                                                  gTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATa                                                                                                                                                                              >  1:692719/1‑153 (MQ=35)                                                                                                                                                                                                                                                                  gTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATa                                                                                                                                                                              <  2:692719/153‑1 (MQ=35)                                                                                                                                                                                                                                                                        gctacagcACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCAGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACt                     >  1:463870/1‑300 (MQ=25)                                                                                                                                                                                                                                                                         ctacagcACCACCGTCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCACCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAATGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGc                        <  2:633912/296‑1 (MQ=25)                                                                                                                                                                                                                                                                                accaccTGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCCGGATATCCGCATCCCGTATAC‑CACAGACCCTGCAGGTAA‑CCGCCTGCCCGACCCGTAGCTGCACCCGGACGGCGCCCTCAGCATGTTGCCGGATAACCGTATCGCCCGGGACGCGCACTATCTGTACCGGTATGACCGTCGCGGCAGGCTGACAGAGAAAACCGACCTCATCCCTGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACAcgcg              <  2:686250/299‑1 (MQ=11)                                                                                                                                                                                                                                                                                 ccaccGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTCTCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGa            >  1:15507/1‑300 (MQ=25)                                                                                                                                                                                                                                                                                         aGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCTTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAat      <  2:628400/298‑1 (MQ=25)                                                                                                                                                                                                                                                                                           gCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCTTACCCACCGGTACCATTACGACAGTCAGCCCCGGCTGGTGCACTACACGCGGACACAATATGc  >  1:220481/1‑300 (MQ=21)                                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                                                         GCCGTGGAATGGCTGACCTACGGCAGCGGCTGGCTGTCAGGCATGAAACTCGGCGACACACCGCTGGTGGAGTACACCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGA‑ACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAC‑CACAGACCCGGCAGGTAA‑CCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGC  >  NC_000913/731953‑732533

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.