Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,436,956 2 bp→TT coding (202‑203/741 nt) cysQ → 3'(2'),5'‑bisphosphate nucleotidase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,436,9560CT100.0% 195.2 / NA 55P68F (CCC→TTC) cysQ3'(2'),5'‑bisphosphate nucleotidase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (27/28);  total (27/28)
*NC_0009134,436,9570CT100.0% 192.6 / NA 55P68F (CCC→TTC) cysQ3'(2'),5'‑bisphosphate nucleotidase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (27/28);  total (27/28)

TATCACAGTTGGCGCATTCATTAACGATAGGGTATAAGTAAAACAATAAGTTAACACCGCTCACAGAGACGAGGTGGAGAAATGTTAGATCAAGTATGCCAGCTTGCACGGAATGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTCCCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCATGGCAAACCGATTTTAGGCGTGGTGTATGCGCCGGTAATGAACGTAATGTACAGCGCGGCAGAAGGCAAAGCGTGGAAAGAAGAGTGCGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGA  >  NC_000913/4436674‑4437233
                                                                                                                                                                                                                                                                                          ||                                                                                                                                                                                                                                                                                    
tATCACAGTTGGCGCATTCATTAACGATAGGGTATAAGTAAAACAATAAGTTAACACCGCTCACAGAGACGAGGTGGAGAAATGTTAGATCAAGTATGCCAGCTTGCACGGAATGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGt                                                                                                                                                                                                                                                                      >  1:176801/1‑300 (MQ=255)
tATCAAAGTTGGCGCATTCATTAACGATAGGGTATAAGTAAAACAATAAGTTAACACCGCTCACAGAGACGAGGTGGAGAAATGTTAGATCAAGTATGCCAGCTTGCACGGAATGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGt                                                                                                                                                                                                                                                                      >  1:177312/1‑300 (MQ=255)
 aTCACAGTTGGCGCATTCATTAACGATAGGGTATAAGTAAAACAATAAGTTAACACCGCTCACAGAGACGAGGTGGAGAAATGTTAGATCAAGTATGCCAGCTTGCACGGAATGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTc                                                                                                                                                                                                                                                                     >  1:593361/1‑300 (MQ=255)
                      aaCGATAGGGTATAAGTAAAACAATAAGTTAACACCGCTCACAGAGACGAGGTGGAGAAATGTTAGATCAAGTATGCCAGCTTGCACGGAATGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTActggc                                                                                                                                                                                                                                                <  1:517407/300‑1 (MQ=255)
                       aCGATAGGGTATAAGTAAAACAATAAGGTAACACCGCTCACAGAGACTAGGTGGAGAAATGTTAGATCAAGTATGCCAGCTTGCACGGAATGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCNGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACTGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTActggct                                                                                                                                                                                                                                               <  2:475063/300‑1 (MQ=255)
                            aGGGTATAAGTAAAACAATAAGTTAACACCGCTCACATAGACGAGGTGGAGAAATGTTAGATCAAGTATGCCAGCTTGCACGGAATGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAg                                                                                                                                                                                                                                          <  2:523131/300‑1 (MQ=255)
                            aGGGTATAAGTAAAACAATAAGTTAACACCGCTCACAGAGACGAGGTGGAGAAATGTTAGATCAAGTATGCCAGCTTGCACGGAATGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAg                                                                                                                                                                                                                                          <  1:570342/300‑1 (MQ=255)
                             gggTATAAGTAAAACAATAAGTTAACACCGCTCACAGAGACGAGGTGGAGAAATGTTAGATCAAGTATGCCAGCTTGCACGGAATGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGa                                                                                                                                                                                                                                         >  1:491046/1‑300 (MQ=255)
                              ggTATAAGTAAAACAATAAGTTAACACCGCTCACAGAGACGAGGTGGAGAAATGTTAGATCAAGTATGCCAGCTTGCACGGAATGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTAATGGCTGGTAGAc                                                                                                                                                                                                                                        >  1:603137/1‑300 (MQ=255)
                               gTATAAGTAAAACAATAAGTTAAAACCGCTCACAGAGACGAGGTGGAGAAATGTTAGATCAAGTATGCCAGCTTGCACGGAATGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGAcc                                                                                                                                                                                                                                       <  1:365838/300‑1 (MQ=255)
                                     gTAAAACAATAAGTTAACACCGCTCACAGAGACGAGGTGGAGAAATGTTAGATCAAGTATGCCAGCTTGCACGGAATGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCt                                                                                                                                                                                                                                   >  2:616823/1‑298 (MQ=255)
                                                aGTTAACACCGCTCACAGAGACGAGGTGGAGAAATGTTAGATCAAGTATGCCAGCTTGCACGGAATGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTTACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTaaa                                                                                                                                                                                                                      >  1:387056/1‑300 (MQ=255)
                                                aGTTAACACCGCTCACAGAGACGAGGTGGAGAAATGTTAGATCAAGTATGCCAGCTTGCACGGAATGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTaaa                                                                                                                                                                                                                      >  1:32670/1‑300 (MQ=255)
                                                 gTTAACACCGCTCACAGAGACGAGGTGGAGAAATGTTAGATCAAGTATGCCAGCTTGCACGGAATGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAag                                                                                                                                                                                                                     <  1:179713/300‑1 (MQ=255)
                                                 gTTAACACCGCTCACAGAGACGAGGTGGAGAAATGTTAGATCAAGTATGCCAGCTTGCACGGAATGCAGGCGATGACATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCCGGATGGTACTAAag                                                                                                                                                                                                                     <  1:398258/300‑1 (MQ=255)
                                                  ttAACACCGCTCACAGAGACGAGGTGGAGAAATGTTAGATCAAGTATGCCAGCTTGCACGGAATGCAGTCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTACGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAag                                                                                                                                                                                                                     <  1:77519/299‑1 (MQ=255)
                                                   tAACACCGCTCACAGAGACGAGGTGGAGAAATGTTAGATCAAGTATGCCAGCTTGCACGGAATGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGTCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAagag                                                                                                                                                                                                                   <  2:835/300‑1 (MQ=255)
                                                         cGCTCACAGAGACGAGGTGGAGAAATGTTAGATCAAGTATGCCAGCTTGCACGGAATGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTCCGTCCGCTGACACCGGATGTTCCGGTCCTTTATGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTAATGGCTGGTAGACCCGATGGATGGTACTAAAGAGCttatt                                                                                                                                                                                                             >  2:217829/1‑300 (MQ=255)
                                                          gCTCACAGAGACGAGGTGGAGAAATGTTAGATCAAGTATGCCAGCTTGCACGGAATGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTttatta                                                                                                                                                                                                            >  2:637361/1‑300 (MQ=255)
                                                                 gcgaCGAGGTGGAGAAATGTTAGATCAAGTATGCCAGCTTGCACGGAATGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCCGCGTTACTGGCTGGTAGACCAGCTGGATGGTCCTAAAGAGTTCATTAAACGTaa                                                                                                                                                                                                     >  2:80778/3‑300 (MQ=255)
                                                                 gagaCGAGGTGGAGAAATGTTAGATCAAGTATGCAAGCTTGCACGGAATGCAGGCGATGCAATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCCGCGGATATTGCCGCTCCCACCGTTATCATGGACGGTTTACGTACGCTAACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTACGTCAGCACTGGCAGCGTCACTGGCTGGTAGAccc                                                                                                                                                                                                                                      >  2:80840/1‑267 (MQ=255)
                                                                                    ttaaaccAAGTATGCCAACTTGCACGGAATGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAAc                                                                                                                                                                                  <  2:331813/294‑1 (MQ=255)
                                                                                    ttAGATCAAGTATGCCAGCTTGCACGGAATGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAAc                                                                                                                                                                                  <  2:629698/300‑1 (MQ=255)
                                                                                           aaGTATGCCAGCTTGCACGGAATGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTgcgc                                                                                                                                                                           <  1:203165/300‑1 (MQ=255)
                                                                                                         gCACGGAATGCAGGCGATGCCATTATGCAGGTCTACGGCGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGTTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCATGGc                                                                                                                                                             <  2:275630/300‑1 (MQ=255)
                                                                                                              gAATGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCATGGCAAAcc                                                                                                                                                        >  2:453102/1‑300 (MQ=255)
                                                                                                                aTGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCATCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTTACCGTTAACATTGCGCTCATTGACCATGGCAAAcaga                                                                                                                                                      >  2:275399/1‑297 (MQ=255)
                                                                                                                         aTGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGTTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCATGGCAAACCGATTTTAGGCg                                                                                                                                             <  2:581273/300‑1 (MQ=255)
                                                                                                                            ccATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGTGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCCTTGACCATGGCAAACCGATTTTAGGCgt                                                                                                                                            >  2:149999/1‑298 (MQ=255)
                                                                                                                            ccATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTACTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGAGAATTCACCGTTAACATTGCGCTCATTGAACATGGCAAACCGATTTTCGGCgt                                                                                                                                            >  2:57501/1‑298 (MQ=255)
                                                                                                                              aTTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGNTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCATGGCAAACCGATTTTAGGCgtggt                                                                                                                                         >  2:468281/1‑299 (MQ=255)
                                                                                                                                 aTGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCATGGCAAACCGATTTTAGGCGTGGTGTAt                                                                                                                                     >  1:509985/1‑300 (MQ=255)
                                                                                                                                     aGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTAAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCATGGCAAACCGATTTTAGGCGTGGTGTATgcg                                                                                                                                  <  1:580244/299‑1 (MQ=255)
                                                                                                                                      ggTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCATGGCAAACCGATTTTAGGCGTGGTGTATGCGcc                                                                                                                                <  1:25949/300‑1 (MQ=255)
                                                                                                                                       gTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTAATGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCATGGAAAACCGATTTTAGGCGTGGTGTATGCGcc                                                                                                                                >  2:235265/1‑299 (MQ=255)
                                                                                                                                                              ggACGTCGTCAGCAAAGCGGACAATTCTCCGTTAACGGCAGCGGATATTGCCGCTCACACCTTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCATGGCAAACCGATTTTAGGCGTGGTGTATGCGCCGGTAATGAACGTAATGTACAgcgc                                                                                                        <  1:361011/300‑1 (MQ=255)
                                                                                                                                                              ggACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGAAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCATGGCAAACCGATTTTAGGCGTGGTGTATGCGCCGGTAATGAACGTAATGTACAgcgc                                                                                                        <  1:590509/300‑1 (MQ=255)
                                                                                                                                                                  gtcgtcAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCATGGCAAACCGATTTTAGGCGTGGTGTATGCGCCGGTAATGAACGTAATGTACAGCGCGGCa                                                                                                    >  1:495059/1‑300 (MQ=255)
                                                                                                                                                                             aGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCATGGCAAACCGATTTTAGGCGTGGTGTATGCGACGGTAATGAACGTAATGTACAACGCGGAAGAAGGCAAAGc                                                                                         >  2:11336/1‑300 (MQ=255)
                                                                                                                                                                             aGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCAACGTTAACATTGCGCTCATTGACCATGGCAAAACGATTTTAGGAGTGGTGTATGCGCAGGTAATGAACGTAATGTAAAGCACGGCAGAAGGCAAAGc                                                                                         >  2:11633/1‑300 (MQ=255)
                                                                                                                                                                                          ccGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTATGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGTGTTACTGGCCGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCACTCATTGACCATGACaaa                                                                                                                                                          >  2:243779/1‑222 (MQ=255)
                                                                                                                                                                                            ggTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCATGGCAAACCGATTTTAGGCGTGGTGTATGCGCCGGTAATGAACGTAATGTACAGCGCGGCAGAAGGCAAAGCGTGGAAAGAagag                                                                            <  1:453102/298‑1 (MQ=255)
                                                                                                                                                                                             gTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGTTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTATACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCTTTAACATTGCGCTCATTGACCATGGCAAACCGATTTTAGGCGTGGTGTATGCGCCGGTAATGAACGTAATGTACAGCGCGGCAGAAGGCAAAGCGTGGAAAGAAGAGTGc                                                                         <  2:363126/300‑1 (MQ=255)
                                                                                                                                                                                                        ggATATTGCCGCTCACACCTTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTCACCATGGCAAACCGATTTTAGGCGTGGTGTATGCGCCGGTAATGAACGTAATGTACAGCGCGGCAGAAGGCAAAGCGTGGAAAGAAGAGTGCGGTGTGCGCa                                                               <  2:565994/299‑1 (MQ=255)
                                                                                                                                                                                                        ggATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCATGGCAAACCGATTTTAGGCGTGGTGTATGCGCCGGTAATGAACGTAATGTACAGCGCGGCAGAAGGCAAAGCGTGGAAAGAAGAGTGCGGTGTGCGCa                                                               <  1:235265/299‑1 (MQ=255)
                                                                                                                                                                                                        ggATATTGCCGCTCACACCGTTATCATAGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCATGGCAAACCGATTTTAGGCGTGGTGTATGCGCCGGTAATGAACGTAATGTACAGCGCGGCAGAAGGCAAAGCGTGGAAAGAAGAGTGCGGTGTGCGCa                                                               <  2:310965/299‑1 (MQ=255)
                                                                                                                                                                                                                    tCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCATGGCAAACCGATTTTAGGCGTGGTGTATGCGCCGGTAATGAACGTAATGTACAGCGCGGCAGAAGGCAAAGCGTGGAAAGAAGAGTGCGGTGTGCGCAAGCAGATTc                                                      <  1:608161/296‑1 (MQ=255)
                                                                                                                                                                                                                              aTCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCATGGCAAACCGATTTTAGGCGTGGTGTATGCGCCGGTAATGAACGTAATGTACAGCGCGGCAGAAGGCAAAGCGTGGAAAGAAGAGTGCGGCGTGCGCAAGCAGATTCAGGTCCGCGATgc                                         >  2:103080/1‑299 (MQ=255)
                                                                                                                                                                                                                              aTCATGGACGGTTTACGTACGCTGACACCGGATGGTCCGGTCTTTTCTGAAGAAGATCCTTTCGGTTGAGAAGCCCATCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGTCGAATTCACCGTTAACATTGCGCTCATTGACCATGGCAAACCGATTTTAGGCGTGGTGTATGCGCCGGTAATGAACGTAAGGTACAGCGCGGCAGAAGGCAAAGCGTGGAAAGAAGAGTGCGGTGGGCGCa                                                               <  2:311241/277‑1 (MQ=255)
                                                                                                                                                                                                                                  tGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCATGGCAAACCGATTTTAGGCGTGGTGTATGCGCCGGTAATGAACGTAATGTACAGCGCGGCAGAAGGCAAAGCGTGGAAAGAAGAGTGCGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGcgcc                                    <  2:17102/300‑1 (MQ=255)
                                                                                                                                                                                                                                                        acCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTTGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGANGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCATGGCAAACCGATTTTAGGCGTGGTGTATGCGCCGGTAATGAACGTAATGTACAGCGCGGCAGAAGGCAAAGCGTGGAAAGAAGAGTGCGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCg              <  2:509985/300‑1 (MQ=255)
                                                                                                                                                                                                                                                        acCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCATGGCAAACCGATTTTAGGCGTGGTGTATGCGCCGGTAATGAACGTAATGTACAGCGCGGCAGAAGGCAAAGCGTGGAAAGAAGAGTGCGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCg              <  2:365032/300‑1 (MQ=255)
                                                                                                                                                                                                                                                               gTTCCGGTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCATGGCAAACCGATTTTAGGCGTGGTGTATGCGCCGGTAATGAACGTAATGTACAGCGCGGCAGAAGGCAAAGCGTGGAAAGAAGAGTGCGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCat       >  1:299879/1‑300 (MQ=255)
                                                                                                                                                                                                                                                               gTTCAGGTCCTTTCTGAAGAAGATCCTTTAGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCATGGCAAACCGATTTTAGGCGTGGTGTATGCGCCGGTAATGAACGTAATGTACAGCGCGGCAGAAGGCAAAGCGTGGAAAGAAGAGTGCGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCAGCCGCTGGTGGTGATCAGCCGTTCCCat       >  1:606963/1‑300 (MQ=255)
                                                                                                                                                                                                                                                                    ggTCCTTTCTGAAGAAGATCCTTTCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCATGGCAAACCGATTTTAGGCGTGGTGTATGCGCCGGTAATGAACGTAATGTACAGCGCGGAAGAAGGCAAAGCGTGGAAAGAAGAGTGCGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCatgcgga  >  2:251661/1‑300 (MQ=255)
                                                                                                                                                                                                                                                                                          ||                                                                                                                                                                                                                                                                                    
TATCACAGTTGGCGCATTCATTAACGATAGGGTATAAGTAAAACAATAAGTTAACACCGCTCACAGAGACGAGGTGGAGAAATGTTAGATCAAGTATGCCAGCTTGCACGGAATGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTCCCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCATGGCAAACCGATTTTAGGCGTGGTGTATGCGCCGGTAATGAACGTAATGTACAGCGCGGCAGAAGGCAAAGCGTGGAAAGAAGAGTGCGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGA  >  NC_000913/4436674‑4437233

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: